Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g040380.2 Solanum lycopersicum HOM05M001682 ORTHO05M024765 8.8e-60 232.6 116 100.0
Solyc06g064550.3 Solanum lycopersicum HOM05M001682 ORTHO05M004094 6.7e-36 153.3 82 90.2
CALSI_Maker00037165 Calamus simplicifolius HOM05M001682 ORTHO05M004094 9.7e-35 149.4 84 88.1
Ma05_g01700 Musa acuminata HOM05M001682 ORTHO05M004094 1.3e-34 149.1 84 88.1
OB08G19920 Oryza brachyantha HOM05M001682 ORTHO05M004094 1.3e-34 149.1 94 77.7
Horvu_MOREX_5H01G299400 Hordeum vulgare HOM05M001682 ORTHO05M004094 1.7e-34 148.7 94 78.7
GWHGASIY025792 Secale cereale HOM05M001682 ORTHO05M004094 1.7e-34 148.7 94 78.7
TraesCS5A03G0471800 Triticum aestivum HOM05M001682 ORTHO05M004094 1.7e-34 148.7 94 78.7
TraesCS5B03G0466300 Triticum aestivum HOM05M001682 ORTHO05M004094 1.7e-34 148.7 94 78.7
TRIDC5BG030370 Triticum dicoccoides HOM05M001682 ORTHO05M004094 1.7e-34 148.7 94 78.7
TRITD5Av1G129910 Triticum turgidum HOM05M001682 ORTHO05M004094 1.7e-34 148.7 94 78.7
Zjn_sc00099.1.g00090.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M001682 ORTHO05M004094 1.7e-34 148.7 84 88.1
Aco017091 Ananas comosus HOM05M001682 ORTHO05M004094 3.7e-34 147.5 94 78.7
MisinT442700 Miscanthus sinensis HOM05M001682 ORTHO05M004094 4.8e-34 147.1 94 77.7
PH02Gene32656 Phyllostachys edulis HOM05M001682 ORTHO05M004094 4.8e-34 147.1 94 77.7
TraesCS5D03G0435100 Triticum aestivum HOM05M001682 ORTHO05M004094 4.8e-34 147.1 94 77.7
p5.00_sc00096_p0084 Elaeis guineensis HOM05M001682 ORTHO05M004094 6.3e-34 146.7 84 85.7
GWHGAZTO094646 Oryza alta HOM05M001682 ORTHO05M004094 6.3e-34 146.7 94 77.7
GWHGAORA002441 Cenchrus purpureus HOM05M001682 ORTHO05M004094 8.2e-34 146.4 84 85.7
GWHGAORA036349 Cenchrus purpureus HOM05M001682 ORTHO05M004094 8.2e-34 146.4 84 85.7
Dexi6A01G0011390 Digitaria exilis HOM05M001682 ORTHO05M004094 8.2e-34 146.4 84 85.7
Dexi6B01G0009460 Digitaria exilis HOM05M001682 ORTHO05M004094 8.2e-34 146.4 84 85.7
EJB05_49736 Eragrostis curvula HOM05M001682 ORTHO05M004094 8.2e-34 146.4 84 85.7
EJB05_55377 Eragrostis curvula HOM05M001682 ORTHO05M004094 8.2e-34 146.4 84 85.7
Seita.6G117900 Setaria italica HOM05M001682 ORTHO05M004094 8.2e-34 146.4 84 85.7
Sevir.6G127400 Setaria viridis HOM05M001682 ORTHO05M004094 8.2e-34 146.4 84 85.7
Zosma03g24700 Zostera marina HOM05M001682 ORTHO05M004094 8.2e-34 146.4 93 79.6
Bradi4g27450 Brachypodium distachyon HOM05M001682 ORTHO05M004094 1.4e-33 145.6 94 77.7
GWHGAZTO048059 Oryza alta HOM05M001682 ORTHO05M004094 1.8e-33 145.2 94 76.6
Ma04_g34720 Musa acuminata HOM05M001682 ORTHO05M004094 2.4e-33 144.8 84 85.7
Ot_Chr2_g25308 Oropetium thomaeum HOM05M001682 ORTHO05M004094 2.4e-33 144.8 94 76.6
OsKitaake08g121300 Oryza sativa Kitaake HOM05M001682 ORTHO05M004094 2.4e-33 144.8 84 84.5
OsR498G0815837600.01 Oryza sativa ssp. indica HOM05M001682 ORTHO05M004094 2.4e-33 144.8 84 84.5
Os08g0342400 Oryza sativa ssp. japonica HOM05M001682 ORTHO05M004094 2.4e-33 144.8 84 84.5
Potri.019G071700 Populus trichocarpa HOM05M001682 ORTHO05M004094 2.4e-33 144.8 84 83.3
evm.TU.AsparagusV1_01.3502.V1.1 Asparagus officinalis HOM05M001682 ORTHO05M004094 3.1e-33 144.4 84 85.7
evm.TU.AsparagusV1_05.1149.V1.1 Asparagus officinalis HOM05M001682 ORTHO05M004094 3.1e-33 144.4 84 84.5
GWHGAZTO050641 Oryza alta HOM05M001682 ORTHO05M004094 3.1e-33 144.4 84 84.5
OsKitaake09g039000 Oryza sativa Kitaake HOM05M001682 ORTHO05M004094 3.1e-33 144.4 84 84.5
OsR498G0917003600.01 Oryza sativa ssp. indica HOM05M001682 ORTHO05M004094 3.1e-33 144.4 84 84.5
Os09g0294000 Oryza sativa ssp. japonica HOM05M001682 ORTHO05M004094 3.1e-33 144.4 84 84.5
PH02Gene21626 Phyllostachys edulis HOM05M001682 ORTHO05M004094 3.1e-33 144.4 94 76.6
GWHGAORA008589 Cenchrus purpureus HOM05M001682 ORTHO05M004094 4.1e-33 144.1 94 76.6
EJB05_44763 Eragrostis curvula HOM05M001682 ORTHO05M004094 4.1e-33 144.1 94 76.6
Glyma.05G151100 Glycine max HOM05M001682 ORTHO05M004094 4.1e-33 144.1 84 83.3
Glyma.08G107800 Glycine max HOM05M001682 ORTHO05M004094 4.1e-33 144.1 84 83.3
Zm00001eb177530 Zea mays B73 HOM05M001682 ORTHO05M004094 4.1e-33 144.1 94 76.6
Zjn_sc00035.1.g00980.1.sm.mk Zoysia japonica ssp. nagirizaki HOM05M001682 ORTHO05M024765 4.1e-33 144.1 94 76.6
AT4G19710 Arabidopsis thaliana HOM05M001682 ORTHO05M004094 5.3e-33 143.7 84 83.3
Seita.2G165800 Setaria italica HOM05M001682 ORTHO05M004094 5.3e-33 143.7 94 76.6
Sevir.2G170400 Setaria viridis HOM05M001682 ORTHO05M004094 5.3e-33 143.7 94 76.6
AT1G31230 Arabidopsis thaliana HOM05M001682 ORTHO05M004094 7.0e-33 143.3 84 82.1
MBI01_g01228_MAGBIO Magnolia biondii HOM05M001682 ORTHO05M004094 7.0e-33 143.3 84 84.5
MBI04_g20663_MAGBIO Magnolia biondii HOM05M001682 ORTHO05M004094 9.1e-33 142.9 84 83.3
Ot_Chr9_g25964 Oropetium thomaeum HOM05M001682 ORTHO05M004094 1.2e-32 142.5 84 83.3
PH02Gene34142 Phyllostachys edulis HOM05M001682 ORTHO05M004094 1.2e-32 142.5 82 85.4
Glyma.18G002932 Glycine max HOM05M001682 ORTHO05M024765 2.7e-32 141.4 84 81.0
ATR0665G656 Amborella trichopoda HOM05M001682 ORTHO05M004094 3.5e-32 141.0 84 82.1
Dexi2A01G0014240 Digitaria exilis HOM05M001682 ORTHO05M004094 3.5e-32 141.0 84 82.1
Dexi2B01G0013220 Digitaria exilis HOM05M001682 ORTHO05M004094 3.5e-32 141.0 84 82.1
V3.Lp_chr5_0G10944 Lolium perenne HOM05M001682 ORTHO05M004094 3.5e-32 141.0 95 75.8
Sobic.002G155100 Sorghum bicolor HOM05M001682 ORTHO05M004094 4.5e-32 140.6 82 82.9
CDE04G0141 Ceratophyllum demersum HOM05M001682 ORTHO05M004094 5.9e-32 140.2 84 82.1
Pahal.2G210000 Panicum hallii HOM05M001682 ORTHO05M004094 5.9e-32 140.2 94 75.5
Sspon.02G0039260-1B Saccharum spontaneum HOM05M001682 ORTHO05M004094 5.9e-32 140.2 82 82.9
Sspon.02G0039260-2C Saccharum spontaneum HOM05M001682 ORTHO05M004094 5.9e-32 140.2 82 82.9
Zm00001eb309070 Zea mays B73 HOM05M001682 ORTHO05M004094 5.9e-32 140.2 82 82.9
Zm00007a00044062 Zea mays B104 HOM05M001682 ORTHO05M004094 7.7e-32 139.8 82 82.9
Potri.013G099500 Populus trichocarpa HOM05M001682 ORTHO05M004094 1.0e-31 139.4 84 81.0
CDE02G3059 Ceratophyllum demersum HOM05M001682 ORTHO05M004094 1.3e-31 139.0 84 81.0
Sspon.02G0017280-1A Saccharum spontaneum HOM05M001682 ORTHO05M004094 1.3e-31 139.0 82 81.7
Asa8G01678 Allium sativum HOM05M001682 ORTHO05M004094 1.7e-31 138.7 92 75.0
Misin03G131700 Miscanthus sinensis HOM05M001682 ORTHO05M004094 1.7e-31 138.7 82 82.9
Sspon.02G0017280-2D Saccharum spontaneum HOM05M001682 ORTHO05M004094 1.7e-31 138.7 81 81.5
Zm00001eb097580 Zea mays B73 HOM05M001682 ORTHO05M004094 1.7e-31 138.7 94 73.4
Zm00007a00047348 Zea mays B104 HOM05M001682 ORTHO05M004094 1.7e-31 138.7 94 73.4
Cre18.g749447 Chlamydomonas reinhardtii HOM05M001682 ORTHO05M004094 3.8e-31 137.5 84 78.6
Spipo26G0008900 Spirodela polyrhiza HOM05M001682 ORTHO05M004094 5.0e-31 137.1 82 80.5
Misin04G145900 Miscanthus sinensis HOM05M001682 ORTHO05M004094 6.5e-31 136.7 82 81.7
Asa5G03985 Allium sativum HOM05M001682 ORTHO05M004094 1.1e-30 136.0 84 78.6
SMO358G0576 Selaginella moellendorffii HOM05M001682 ORTHO05M004094 1.5e-30 135.6 82 82.9
DDU888G0095 Dioscorea dumetorum HOM05M001682 ORTHO05M004094 1.9e-30 135.2 80 82.5
CBR_g26412 Chara braunii HOM05M001682 ORTHO05M004094 7.2e-30 133.3 84 77.4
PRCOL_00002501 Prasinoderma coloniale HOM05M001682 ORTHO05M004094 2.1e-29 131.7 84 75.0
Pp3c25_5840 Physcomitrium patens HOM05M001682 ORTHO05M004094 4.4e-27 124.0 84 71.4
Pp3c25_5870 Physcomitrium patens HOM05M001682 ORTHO05M004094 4.4e-27 124.0 85 74.1
Pp3c16_8500 Physcomitrium patens HOM05M001682 ORTHO05M004094 1.3e-26 122.5 93 67.7
SEGI_15548 Sequoiadendron giganteum HOM05M001682 ORTHO05M004094 1.7e-26 122.1 74 79.7
Mapoly0016s0043 Marchantia polymorpha HOM05M001682 ORTHO05M004094 2.8e-26 121.3 84 72.6
MCO10G303 Micromonas commoda HOM05M001682 ORTHO05M004094 4.8e-26 120.6 85 70.6
Mapoly0016s0044 Marchantia polymorpha HOM05M001682 ORTHO05M004094 9.1e-25 116.3 82 72.0
Cre02.g109550 Chlamydomonas reinhardtii HOM05M001682 ORTHO05M004094 2.5e-22 108.2 75 66.7
PRCOL_00004457 Prasinoderma coloniale HOM05M001682 ORTHO05M004094 4.7e-21 104.0 80 62.5
MCO04G115 Micromonas commoda HOM05M001682 ORTHO05M004094 1.4e-20 102.4 107 51.4
HPP92_021925 Vanilla planifolia HOM05M001682 ORTHO05M004094 6.8e-20 100.1 62 75.8
OB09G12600 Oryza brachyantha HOM05M001682 ORTHO05M004094 1.1e-14 82.8 48 79.2
GWHGAZTO097111 Oryza alta HOM05M001682 ORTHO05M004094 4.3e-14 80.9 49 75.5
Aco012625 Ananas comosus HOM05M001682 ORTHO05M007946 2.9e-10 68.2 98 36.7
Potri.004G196200 Populus trichocarpa HOM05M001682 ORTHO05M007946 4.9e-10 67.4 73 45.2
Glyma.20G053200 Glycine max HOM05M001682 ORTHO05M007946 8.3e-10 66.6 73 43.8
AT5G21060 Arabidopsis thaliana HOM05M001682 ORTHO05M007946 1.9e-09 65.5 75 44.0
Ma08_g09080 Musa acuminata HOM05M001682 ORTHO05M007946 1.9e-09 65.5 94 37.2
Solyc11g072010.3 Solanum lycopersicum HOM05M001682 ORTHO05M007946 3.2e-09 64.7 73 42.5
Bradi4g43920 Brachypodium distachyon HOM05M001682 ORTHO05M007946 5.4e-09 63.9 75 42.7
SMO364G0184 Selaginella moellendorffii HOM05M001682 ORTHO05M007946 9.2e-09 63.2 80 38.8
Zosma01g42590 Zostera marina HOM05M001682 ORTHO05M007946 9.2e-09 63.2 89 36.0
p5.00_sc00015_p0118 Elaeis guineensis HOM05M001682 ORTHO05M007946 1.6e-08 62.4 75 40.0
CBR_g24080 Chara braunii HOM05M001682 ORTHO05M007946 3.5e-08 61.2 75 42.7
PH02Gene40177 Phyllostachys edulis HOM05M001682 ORTHO05M007946 3.5e-08 61.2 75 40.0
EJB05_02068 Eragrostis curvula HOM05M001682 ORTHO05M007946 6.0e-08 60.5 75 40.0
CALSI_Maker00009941 Calamus simplicifolius HOM05M001682 ORTHO05M007946 7.8e-08 60.1 68 42.6
HPP92_018006 Vanilla planifolia HOM05M001682 ORTHO05M007946 7.8e-08 60.1 75 36.0
HPP92_026681 Vanilla planifolia HOM05M001682 ORTHO05M007946 7.8e-08 60.1 75 36.0
OB12G11620 Oryza brachyantha HOM05M001682 ORTHO05M007946 1.0e-07 59.7 76 42.1
TraesCS5B03G0391600 Triticum aestivum HOM05M001682 ORTHO05M007946 1.0e-07 59.7 75 41.3
TraesCS5D03G0372600 Triticum aestivum HOM05M001682 ORTHO05M007946 1.0e-07 59.7 75 40.0
TRIDC5BG025100 Triticum dicoccoides HOM05M001682 ORTHO05M007946 1.0e-07 59.7 75 41.3
TRITD5Bv1G090160 Triticum turgidum HOM05M001682 ORTHO05M007946 1.0e-07 59.7 75 41.3
AET5Gv20370700 Aegilops tauschii HOM05M001682 ORTHO05M007946 1.3e-07 59.3 75 40.0
Horvu_MOREX_5H01G247500 Hordeum vulgare HOM05M001682 ORTHO05M007946 1.3e-07 59.3 75 40.0
V3.Lp_chr5_0G8478 Lolium perenne HOM05M001682 ORTHO05M007946 1.3e-07 59.3 75 40.0
Ot_Chr3_g25768 Oropetium thomaeum HOM05M001682 ORTHO05M007946 1.3e-07 59.3 75 40.0
GWHGASIY025437 Secale cereale HOM05M001682 ORTHO05M007946 1.3e-07 59.3 75 40.0
Spipo3G0016500 Spirodela polyrhiza HOM05M001682 ORTHO05M007946 1.3e-07 59.3 98 32.7
TraesCS5A03G0396200 Triticum aestivum HOM05M001682 ORTHO05M007946 1.3e-07 59.3 75 40.0
TRIDC5AG023940 Triticum dicoccoides HOM05M001682 ORTHO05M007946 1.3e-07 59.3 75 40.0
TRITD5Av1G108260 Triticum turgidum HOM05M001682 ORTHO05M007946 1.3e-07 59.3 75 40.0
ATR0068G110 Amborella trichopoda HOM05M001682 ORTHO05M007946 1.7e-07 58.9 75 41.3
MBI19_g40249_MAGBIO Magnolia biondii HOM05M001682 ORTHO05M007946 1.7e-07 58.9 75 38.7
GWHGAZTO010264 Oryza alta HOM05M001682 ORTHO05M007946 1.7e-07 58.9 96 37.5
MBI19_g32309_MAGBIO Magnolia biondii HOM05M001682 ORTHO05M007946 2.3e-07 58.5 75 38.7
AagrBONN_evm.TU.Sc2ySwM_228.5806 Anthoceros agrestis HOM05M001682 ORTHO05M007946 3.9e-07 57.8 76 40.8
Dexi3A01G0001510 Digitaria exilis HOM05M001682 ORTHO05M007946 3.9e-07 57.8 75 38.7
Dexi8A01G0001510 Digitaria exilis HOM05M001682 ORTHO05M007946 3.9e-07 57.8 75 38.7
Misin14G025100 Miscanthus sinensis HOM05M001682 ORTHO05M007946 3.9e-07 57.8 75 38.7
Pahal.8G015500 Panicum hallii HOM05M001682 ORTHO05M007946 3.9e-07 57.8 75 40.0
Sspon.05G0020500-2P Saccharum spontaneum HOM05M000039 ORTHO05M002107 3.9e-07 57.8 75 38.7
Sspon.07G0017510-1A Saccharum spontaneum HOM05M001682 ORTHO05M007946 3.9e-07 57.8 75 38.7
Sspon.07G0017510-1P Saccharum spontaneum HOM05M001682 ORTHO05M007946 3.9e-07 57.8 75 38.7
Sspon.07G0017510-2C Saccharum spontaneum HOM05M001682 ORTHO05M007946 3.9e-07 57.8 75 38.7
Sspon.07G0017510-3D Saccharum spontaneum HOM05M001682 ORTHO05M007946 3.9e-07 57.8 75 38.7
Sevir.7G318701 Setaria viridis HOM05M001682 ORTHO05M007946 3.9e-07 57.8 75 38.7
Pahal.3G014600 Panicum hallii HOM05M001682 ORTHO05M007946 5.0e-07 57.4 75 38.7
Seita.8G006100 Setaria italica HOM05M001682 ORTHO05M007946 5.0e-07 57.4 75 38.7
Sevir.8G005700 Setaria viridis HOM05M001682 ORTHO05M007946 5.0e-07 57.4 75 38.7
Zjn_sc00028.1.g03420.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M001682 ORTHO05M007946 5.0e-07 57.4 75 38.7
GWHGAORA005613 Cenchrus purpureus HOM05M001682 ORTHO05M007946 6.6e-07 57.0 75 37.3
GWHGAZTO013490 Oryza alta HOM05M001682 ORTHO05M007946 6.6e-07 57.0 75 40.0
OsKitaake11g015600 Oryza sativa Kitaake HOM05M001682 ORTHO05M007946 6.6e-07 57.0 75 40.0
OsR498G1220865200.01 Oryza sativa ssp. indica HOM05M001682 ORTHO05M007946 6.6e-07 57.0 75 40.0
Os11g0128800 Oryza sativa ssp. japonica HOM05M001682 ORTHO05M007946 6.6e-07 57.0 75 40.0
Os12g0125400 Oryza sativa ssp. japonica HOM05M001682 ORTHO05M007946 6.6e-07 57.0 75 40.0
SMO112G0109 Selaginella moellendorffii HOM05M001682 ORTHO05M007946 6.6e-07 57.0 62 38.7
CALSI_Maker00005149 Calamus simplicifolius HOM05M001682 ORTHO05M007946 1.1e-06 56.2 76 36.8
Misin15G014700 Miscanthus sinensis HOM05M001682 ORTHO05M007946 1.1e-06 56.2 75 37.3
evm.TU.AsparagusV1_02.1255.V1.1 Asparagus officinalis HOM05M001682 ORTHO05M007946 3.3e-06 54.7 80 32.5
Seita.7G307900 Setaria italica HOM05M001682 ORTHO05M007946 9.5e-06 53.1 75 40.0

Aegilops tauschii (1 genes)
Allium sativum (2 genes)
Amborella trichopoda (2 genes)
Ananas comosus (2 genes)
Anthoceros agrestis (1 genes)
Arabidopsis thaliana (3 genes)
Asparagus officinalis (3 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (3 genes)
Cenchrus purpureus (4 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (2 genes)
Chlamydomonas reinhardtii (2 genes)
Digitaria exilis (6 genes)
Dioscorea dumetorum (1 genes)
Elaeis guineensis (2 genes)
Eragrostis curvula (4 genes)
Glycine max (4 genes)
Hordeum vulgare (2 genes)
Lolium perenne (2 genes)
Magnolia biondii (4 genes)
Marchantia polymorpha (2 genes)
Micromonas commoda (2 genes)
Miscanthus sinensis (5 genes)
Musa acuminata (3 genes)
Oropetium thomaeum (3 genes)
Oryza alta (6 genes)
Oryza brachyantha (3 genes)
Oryza sativa Kitaake (3 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (4 genes)
Panicum hallii (3 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (3 genes)
Populus trichocarpa (3 genes)
Prasinoderma coloniale (2 genes)
Saccharum spontaneum (9 genes)
Secale cereale (2 genes)
Selaginella moellendorffii (3 genes)
Sequoiadendron giganteum (1 genes)
Setaria italica (4 genes)
Setaria viridis (4 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (6 genes)
Triticum dicoccoides (3 genes)
Triticum turgidum (3 genes)
Vanilla planifolia (3 genes)
Zea mays B73 (3 genes)
Zea mays B104 (2 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (3 genes)

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