Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g028070.2 Solanum lycopersicum HOM05M013689 ORTHO05M000453 5.2e-51 203.4 106 100.0
Solyc11g028040.2 Solanum lycopersicum HOM05M013689 ORTHO05M000453 8.6e-46 186.0 106 91.5
Solyc07g006380.3 Solanum lycopersicum HOM05M013689 ORTHO05M000453 2.1e-36 154.8 106 76.4
Solyc07g150108.1 Solanum lycopersicum HOM05M013689 ORTHO05M000453 9.8e-34 146.0 84 85.7
Solyc07g016095.1 Solanum lycopersicum HOM05M013689 ORTHO05M000453 4.1e-32 140.6 84 81.0
Solyc11g028060.1 Solanum lycopersicum HOM05M013689 ORTHO05M000453 1.4e-19 99.0 56 89.3
Solyc07g016120.3 Solanum lycopersicum HOM05M013689 ORTHO05M000453 7.6e-18 93.2 59 78.0
Solyc07g016113.1 Solanum lycopersicum HOM05M013689 ORTHO05M000453 1.4e-16 89.0 109 53.2
OsKitaake02g056780 Oryza sativa Kitaake HOM05M007243 ORTHO05M008806 4.0e-11 70.9 63 46.0
Os02g0172000 Oryza sativa ssp. japonica HOM05M000601 ORTHO05M000453 2.6e-10 68.2 51 52.9
Horvu_MOREX_2H01G047700 Hordeum vulgare HOM05M000601 ORTHO05M000453 4.9e-09 63.9 76 42.1
Bradi5g02845 Brachypodium distachyon HOM05M000601 ORTHO05M000453 6.4e-09 63.5 70 47.1
Glyma.16G100400 Glycine max HOM05M000601 ORTHO05M000453 6.4e-09 63.5 79 39.2
GWHGAZTO068490 Oryza alta HOM05M007243 ORTHO05M008806 6.4e-09 63.5 66 40.9
OB02G14730 Oryza brachyantha HOM05M007243 ORTHO05M008806 1.4e-08 62.4 64 46.9
Bradi5g02840 Brachypodium distachyon HOM05M000601 ORTHO05M000453 1.9e-08 62.0 75 46.7
AET2Gv20080300 Aegilops tauschii HOM05M000601 ORTHO05M000453 2.4e-08 61.6 78 43.6
Glyma.08G005300 Glycine max HOM05M000601 ORTHO05M000453 2.4e-08 61.6 45 53.3
Ma08_g13660 Musa acuminata HOM05M000601 ORTHO05M000453 2.4e-08 61.6 69 46.4
OsKitaake02g056900 Oryza sativa Kitaake HOM05M007243 ORTHO05M008806 2.4e-08 61.6 66 42.4
TraesCS2B03G0128100 Triticum aestivum HOM05M000601 ORTHO05M000453 2.4e-08 61.6 78 43.6
TraesCS2D03G0086900 Triticum aestivum HOM05M000601 ORTHO05M000453 2.4e-08 61.6 78 43.6
TRIDC2AG005130 Triticum dicoccoides HOM05M000601 ORTHO05M000453 2.4e-08 61.6 68 44.1
TRIDC2BG005690 Triticum dicoccoides HOM05M000601 ORTHO05M000453 2.4e-08 61.6 78 43.6
TRITD2Av1G011110 Triticum turgidum HOM05M000601 ORTHO05M000453 2.4e-08 61.6 68 44.1
TRITD2Bv1G014230 Triticum turgidum HOM05M000601 ORTHO05M000453 2.4e-08 61.6 78 43.6
AET0Gv20048800 Aegilops tauschii HOM05M000601 ORTHO05M000453 3.2e-08 61.2 69 46.4
TraesCS2D03G0087400 Triticum aestivum HOM05M000601 ORTHO05M000453 3.2e-08 61.2 69 46.4
GWHGAZTO068489 Oryza alta HOM05M007243 ORTHO05M008806 4.2e-08 60.8 65 43.1
GWHGAZTO068492 Oryza alta HOM05M007243 ORTHO05M008806 4.2e-08 60.8 66 43.9
TRIDC2AG005120 Triticum dicoccoides HOM05M000601 ORTHO05M000453 4.2e-08 60.8 67 43.3
TRITD2Av1G011190 Triticum turgidum HOM05M000601 ORTHO05M000453 4.2e-08 60.8 67 43.3
Bradi1g77425 Brachypodium distachyon HOM05M000601 ORTHO05M000453 5.4e-08 60.5 75 41.3
Aco029373 Ananas comosus HOM05M000601 ORTHO05M000453 7.1e-08 60.1 73 37.0
Solyc07g007755.1 Solanum lycopersicum HOM05M000601 ORTHO05M000453 7.1e-08 60.1 78 39.7
TraesCS2A03G0091700 Triticum aestivum HOM05M000601 ORTHO05M000453 7.1e-08 60.1 78 41.0
GWHGASIY041887 Secale cereale HOM05M000601 ORTHO05M000453 9.3e-08 59.7 68 42.6
TraesCS2D03G0087000 Triticum aestivum HOM05M000601 ORTHO05M000453 9.3e-08 59.7 68 42.6
Zosma01g24880 Zostera marina HOM05M000601 ORTHO05M000453 9.3e-08 59.7 47 44.7
Aco007470 Ananas comosus HOM05M000601 ORTHO05M000453 1.2e-07 59.3 46 50.0
TraesCS2B03G0128200 Triticum aestivum HOM05M000601 ORTHO05M000453 1.2e-07 59.3 68 42.6
TRIDC2BG005700 Triticum dicoccoides HOM05M000601 ORTHO05M000453 1.2e-07 59.3 68 42.6
TRITD2Bv1G014190 Triticum turgidum HOM05M000601 ORTHO05M000453 1.2e-07 59.3 68 42.6
Asa6G03043 Allium sativum HOM05M000601 ORTHO05M000453 1.6e-07 58.9 58 44.8
GWHGASIY041886 Secale cereale HOM05M000601 ORTHO05M000453 1.6e-07 58.9 78 41.0
TraesCS2A03G0091800 Triticum aestivum HOM05M000601 ORTHO05M000453 1.6e-07 58.9 68 42.6
Glyma.08G268000 Glycine max HOM05M000601 ORTHO05M000453 2.1e-07 58.5 76 38.2
AT2G31957 Arabidopsis thaliana HOM05M000601 ORTHO05M000453 2.7e-07 58.2 51 45.1
V3.Lp_chr2_0G1510 Lolium perenne HOM05M000601 ORTHO05M000453 3.5e-07 57.8 76 42.1
Ma11_g12930 Musa acuminata HOM05M000601 ORTHO05M000453 3.5e-07 57.8 67 38.8
GWHGAZTO077978 Oryza alta HOM05M000601 ORTHO05M000453 3.5e-07 57.8 75 38.7
Horvu_MOREX_2H01G047800 Hordeum vulgare HOM05M000601 ORTHO05M000453 4.6e-07 57.4 69 44.9
Horvu_MOREX_7H01G210400 Hordeum vulgare HOM05M000601 ORTHO05M000453 4.6e-07 57.4 70 38.6
Solyc07g007730.4 Solanum lycopersicum HOM05M000601 ORTHO05M000453 4.6e-07 57.4 79 40.5
GWHGAZTO028166 Oryza alta HOM05M000601 ORTHO05M000453 6.0e-07 57.0 69 39.1
Seita.1G133800 Setaria italica HOM05M000601 ORTHO05M000453 7.9e-07 56.6 75 38.7
Sevir.1G132300 Setaria viridis HOM05M000601 ORTHO05M000453 7.9e-07 56.6 75 38.7
GWHGAORA016275 Cenchrus purpureus HOM05M000601 ORTHO05M000453 1.0e-06 56.2 75 37.3
GWHGASIY031503 Secale cereale HOM05M007243 ORTHO05M008806 1.3e-06 55.8 74 40.5
SEGI_34828 Sequoiadendron giganteum HOM05M000601 ORTHO05M000453 1.3e-06 55.8 77 42.9
OsKitaake02g056800 Oryza sativa Kitaake HOM05M007243 ORTHO05M008806 1.7e-06 55.5 66 39.4
OsKitaake04g034800 Oryza sativa Kitaake HOM05M000601 ORTHO05M000453 1.7e-06 55.5 45 46.7
OsR498G0407680000.01 Oryza sativa ssp. indica HOM05M000601 ORTHO05M000453 1.7e-06 55.5 45 46.7
Os02g0172300 Oryza sativa ssp. japonica HOM05M007243 ORTHO05M008806 1.7e-06 55.5 66 39.4
Os04g0189400 Oryza sativa ssp. japonica HOM05M000601 ORTHO05M000453 1.7e-06 55.5 45 46.7
OB04G12800 Oryza brachyantha HOM05M000601 ORTHO05M000453 2.3e-06 55.1 76 36.8
Solyc04g008470.3 Solanum lycopersicum HOM05M000601 ORTHO05M000453 2.3e-06 55.1 66 36.4
TraesCS6D03G0325800 Triticum aestivum HOM05M007243 ORTHO05M008806 2.3e-06 55.1 60 43.3
Ot_Chr1_g02817 Oropetium thomaeum HOM05M000601 ORTHO05M000453 3.0e-06 54.7 75 40.0
Zm00007a00052517 Zea mays B104 HOM05M000601 ORTHO05M000453 3.0e-06 54.7 53 45.3
Aco008353 Ananas comosus HOM05M000601 ORTHO05M000453 3.9e-06 54.3 69 39.1
Aco030173 Ananas comosus HOM05M000601 ORTHO05M000453 3.9e-06 54.3 76 38.2
Glyma.06G160300 Glycine max HOM05M000601 ORTHO05M000453 3.9e-06 54.3 76 39.5
Horvu_MOREX_6H01G211200 Hordeum vulgare HOM05M007243 ORTHO05M008806 3.9e-06 54.3 74 39.2
TraesCS3A03G1028500 Triticum aestivum HOM05M000601 ORTHO05M000453 3.9e-06 54.3 65 40.0
Zosma01g24860 Zostera marina HOM05M000601 ORTHO05M000453 3.9e-06 54.3 45 46.7
MBI06_g26879_MAGBIO Magnolia biondii HOM05M000601 ORTHO05M000453 5.1e-06 53.9 45 51.1
Misin04G089100 Miscanthus sinensis HOM05M000601 ORTHO05M000453 5.1e-06 53.9 45 51.1
GWHGAZTO006787 Oryza alta HOM05M007243 ORTHO05M000453 5.1e-06 53.9 67 41.8
Solyc07g007710.4 Solanum lycopersicum HOM05M000601 ORTHO05M000453 5.1e-06 53.9 69 37.7
TRIDC3AG062620 Triticum dicoccoides HOM05M000601 ORTHO05M000453 5.1e-06 53.9 71 39.4
GWHGAZTO059115 Oryza alta HOM05M007243 ORTHO05M000453 6.6e-06 53.5 67 40.3
OsKitaake01g459900 Oryza sativa Kitaake HOM05M007243 ORTHO05M000453 6.6e-06 53.5 67 40.3
Os01g0932700 Oryza sativa ssp. japonica HOM05M007243 ORTHO05M000453 6.6e-06 53.5 67 40.3
Sobic.002G089600 Sorghum bicolor HOM05M000601 ORTHO05M000453 6.6e-06 53.5 45 46.7
Bradi5g02832 Brachypodium distachyon HOM05M000601 ORTHO05M000453 8.7e-06 53.1 49 49.0
CDE04G2371 Ceratophyllum demersum HOM05M000601 ORTHO05M000453 8.7e-06 53.1 69 39.1
TraesCS3A03G1028100 Triticum aestivum HOM05M000601 ORTHO05M000453 8.7e-06 53.1 72 37.5
TraesCS6B03G0469500 Triticum aestivum HOM05M007243 ORTHO05M008806 8.7e-06 53.1 74 39.2
TRIDC3AG062580 Triticum dicoccoides HOM05M000601 ORTHO05M000453 8.7e-06 53.1 72 37.5
TRIDC6BG027710 Triticum dicoccoides HOM05M007243 ORTHO05M008806 8.7e-06 53.1 74 39.2
TRITD3Av1G250280 Triticum turgidum HOM05M000601 ORTHO05M000453 8.7e-06 53.1 72 37.5
TRITD6Bv1G069150 Triticum turgidum HOM05M007243 ORTHO05M008806 8.7e-06 53.1 74 39.2
Zm00001eb236940 Zea mays B73 HOM05M000601 ORTHO05M000453 8.7e-06 53.1 81 34.6
Zm00001eb304240 Zea mays B73 HOM05M000601 ORTHO05M000453 8.7e-06 53.1 45 48.9
Zm00007a00023010 Zea mays B104 HOM05M000601 ORTHO05M000453 8.7e-06 53.1 45 48.9

Aegilops tauschii (2 genes)
Allium sativum (1 genes)
Amborella trichopoda (0 genes)
Ananas comosus (4 genes)
Anthoceros agrestis (0 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (0 genes)
Brachypodium distachyon (4 genes)
Calamus simplicifolius (0 genes)
Cenchrus purpureus (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (0 genes)
Dioscorea dumetorum (0 genes)
Elaeis guineensis (0 genes)
Eragrostis curvula (0 genes)
Glycine max (4 genes)
Hordeum vulgare (4 genes)
Lolium perenne (1 genes)
Magnolia biondii (1 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (1 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (1 genes)
Oryza alta (7 genes)
Oryza brachyantha (2 genes)
Oryza sativa Kitaake (5 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (4 genes)
Panicum hallii (0 genes)
Phyllostachys edulis (0 genes)
Physcomitrium patens (0 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (0 genes)
Secale cereale (3 genes)
Selaginella moellendorffii (0 genes)
Sequoiadendron giganteum (1 genes)
Setaria italica (1 genes)
Setaria viridis (1 genes)
Solanum lycopersicum (12 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (0 genes)
Triticum aestivum (11 genes)
Triticum dicoccoides (7 genes)
Triticum turgidum (6 genes)
Vanilla planifolia (0 genes)
Zea mays B73 (2 genes)
Zea mays B104 (2 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (0 genes)

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