Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g021213.1 Solanum lycopersicum HOM05M001115 ORTHO05M005454 1.3e-88 328.9 174 100.0
Pahal.3G034100 Panicum hallii HOM05M001115 ORTHO05M005454 6.5e-59 230.3 185 67.6
GWHGASIY019870 Secale cereale HOM05M001115 ORTHO05M005454 1.1e-58 229.6 185 68.6
V3.Lp_scaffold_4559G18 Lolium perenne HOM05M001115 ORTHO05M005454 1.5e-58 229.2 185 67.6
V3.Lp_scaffold_891G6 Lolium perenne HOM05M001115 ORTHO05M005454 1.5e-58 229.2 185 67.6
OsKitaake07g111000 Oryza sativa Kitaake HOM05M001115 ORTHO05M005454 1.5e-58 229.2 185 67.0
OsKitaake10g165832 Oryza sativa Kitaake HOM05M001115 ORTHO05M005454 1.5e-58 229.2 185 67.0
OsKitaake06g252800 Oryza sativa Kitaake HOM05M001115 ORTHO05M005454 5.5e-58 227.3 185 66.5
OsR498G0612783800.01 Oryza sativa ssp. indica HOM05M001115 ORTHO05M005454 5.5e-58 227.3 185 66.5
TRIDC3AG037480 Triticum dicoccoides HOM05M001115 ORTHO05M005454 5.5e-58 227.3 185 68.1
AET1Gv20467400 Aegilops tauschii HOM05M001115 ORTHO05M005454 1.6e-57 225.7 185 67.6
TRIDC7BG017830 Triticum dicoccoides HOM05M001115 ORTHO05M005454 2.1e-57 225.3 185 68.1
TraesCS3B03G0454200 Triticum aestivum HOM05M001115 ORTHO05M005454 6.1e-57 223.8 185 67.6
Bradi2g13077 Brachypodium distachyon HOM05M001115 ORTHO05M005454 1.4e-56 222.6 185 67.0
Ot_Chr7_gn38431 Oropetium thomaeum HOM05M001115 ORTHO05M005454 1.8e-56 222.2 180 67.8
Ot_Chr7_gn38432 Oropetium thomaeum HOM05M001115 ORTHO05M005454 1.8e-56 222.2 180 67.8
Ot_Chr7_gn38433 Oropetium thomaeum HOM05M001115 ORTHO05M005454 1.8e-56 222.2 180 67.8
Ot_Un136_gn40169 Oropetium thomaeum HOM05M001115 ORTHO05M005454 1.8e-56 222.2 180 67.8
Ot_Un168_gn40609 Oropetium thomaeum HOM05M001115 ORTHO05M005454 1.8e-56 222.2 180 67.8
Ot_Un171_gn40698 Oropetium thomaeum HOM05M001115 ORTHO05M005454 1.8e-56 222.2 180 67.8
Ot_Un3_gn40920 Oropetium thomaeum HOM05M001115 ORTHO05M005454 1.8e-56 222.2 180 67.8
Ot_Un9_gn41210 Oropetium thomaeum HOM05M001115 ORTHO05M005454 1.8e-56 222.2 180 67.8
Aco024830 Ananas comosus HOM05M001115 ORTHO05M005454 2.0e-55 218.8 179 68.7
AET1Gv20912500 Aegilops tauschii HOM05M001115 ORTHO05M005454 2.7e-52 208.4 178 66.3
TRITD3Bv1G075950 Triticum turgidum HOM05M001115 ORTHO05M005454 5.0e-51 204.1 142 74.6
Seita.J016700 Setaria italica HOM05M001115 ORTHO05M005454 1.2e-49 199.5 137 73.7
OsKitaake10g165814 Oryza sativa Kitaake HOM05M001115 ORTHO05M005454 3.0e-48 194.9 185 60.0
TRIDC4AG024280 Triticum dicoccoides HOM05M001115 ORTHO05M005454 5.0e-43 177.6 126 75.4
TRITD5Bv1G141970 Triticum turgidum HOM05M001115 ORTHO05M005454 8.0e-41 170.2 142 68.3
TraesCS4A03G0394000 Triticum aestivum HOM05M001115 ORTHO05M005454 1.2e-39 166.4 121 72.7
Solyc01g065585.1 Solanum lycopersicum HOM05M001115 ORTHO05M005454 6.3e-38 160.6 123 74.0
SEGI_13011 Sequoiadendron giganteum HOM05M001115 ORTHO05M005454 7.0e-37 157.1 124 66.9
V3.Lp_chr7_0.1G8392 Lolium perenne HOM05M001115 ORTHO05M005454 1.0e-35 153.3 127 66.9
V3.Lp_scaffold_4807G16 Lolium perenne HOM05M001115 ORTHO05M005454 1.0e-35 153.3 127 66.9
Solyc01g065610.1 Solanum lycopersicum HOM05M001115 ORTHO05M005454 4.0e-32 141.4 108 75.9
OsR498G0511369000.01 Oryza sativa ssp. indica HOM05M001115 ORTHO05M005454 1.7e-30 136.0 117 65.0
Misin04G291600 Miscanthus sinensis HOM05M001115 ORTHO05M005454 8.3e-30 133.7 121 62.0
Solyc01g065620.1 Solanum lycopersicum HOM05M001115 ORTHO05M005454 4.1e-29 131.3 109 68.8
Asa5G01912 Allium sativum HOM05M001115 ORTHO05M005454 3.0e-27 125.2 84 77.4
Asa6G00308 Allium sativum HOM05M001115 ORTHO05M005454 3.0e-27 125.2 84 77.4
Asa8G06113 Allium sativum HOM05M001115 ORTHO05M005454 3.0e-27 125.2 84 77.4
V3.Lp_chr3_0G21870 Lolium perenne HOM05M001115 ORTHO05M005454 3.0e-27 125.2 82 79.3
SMO086G0020 Selaginella moellendorffii HOM05M001115 ORTHO05M005454 1.5e-23 112.8 131 51.1
MisinT203100 Miscanthus sinensis HOM05M001115 ORTHO05M005454 6.0e-20 100.9 170 44.1
TRIDC4AG020350 Triticum dicoccoides HOM05M001115 ORTHO05M005454 2.5e-18 95.5 69 69.6
Zm00007a00022333 Zea mays B104 HOM05M001634 ORTHO05M001555 3.3e-18 95.1 94 57.4
MBI10_g47590_MAGBIO Magnolia biondii HOM05M001115 ORTHO05M005454 8.9e-16 87.0 190 36.3
Solyc01g065630.1 Solanum lycopersicum HOM05M001115 ORTHO05M005454 2.9e-14 82.0 54 77.8
TRIDC7BG036260 Triticum dicoccoides HOM05M001115 ORTHO05M005454 4.6e-12 74.7 53 67.9
Mapoly0092s0003 Marchantia polymorpha HOM05M001115 ORTHO05M005454 1.7e-11 72.8 136 42.6
AET6Gv20642700 Aegilops tauschii HOM05M001115 ORTHO05M005454 1.1e-10 70.1 53 66.0
V3.Lp_chr7_0.1G8394 Lolium perenne HOM05M001115 ORTHO05M005454 7.3e-10 67.4 49 69.4
TRITD1Av1G219570 Triticum turgidum HOM05M001713 ORTHO05M001672 2.3e-08 62.4 131 30.5
TRITD4Bv1G070380 Triticum turgidum HOM05M001713 ORTHO05M001672 4.0e-08 61.6 131 29.8
ATMG00580 Arabidopsis thaliana HOM05M001713 ORTHO05M001672 6.8e-08 60.8 131 29.0
TraesCS2A03G1184200 Triticum aestivum HOM05M001713 ORTHO05M001672 6.8e-08 60.8 131 29.8
TRITD3Bv1G075750 Triticum turgidum HOM05M001713 ORTHO05M001672 1.2e-07 60.1 131 29.0
TRITD4Av1G032590 Triticum turgidum HOM05M001713 ORTHO05M001672 1.5e-07 59.7 131 29.0
AET6Gv20782800 Aegilops tauschii HOM05M001115 ORTHO05M005454 2.0e-07 59.3 70 52.9
OB07G23370 Oryza brachyantha HOM05M001713 ORTHO05M001672 5.8e-07 57.8 91 33.0
TraesCS5B03G1382300 Triticum aestivum HOM05M001713 ORTHO05M001672 5.8e-07 57.8 131 28.2
TRIDC3BG002740 Triticum dicoccoides HOM05M001115 ORTHO05M005454 7.6e-07 57.4 42 66.7
TRIDC6AG051380 Triticum dicoccoides HOM05M001713 ORTHO05M001672 1.7e-06 56.2 113 31.0
MisinT575200 Miscanthus sinensis HOM05M001713 ORTHO05M001672 2.2e-06 55.8 108 30.6
TRITD5Av1G101650 Triticum turgidum HOM05M001713 ORTHO05M001672 2.2e-06 55.8 131 28.2
MBI10_g47593_MAGBIO Magnolia biondii HOM05M001115 ORTHO05M005454 3.8e-06 55.1 36 77.8

Aegilops tauschii (4 genes)
Allium sativum (3 genes)
Amborella trichopoda (0 genes)
Ananas comosus (1 genes)
Anthoceros agrestis (0 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (0 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (0 genes)
Cenchrus purpureus (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (0 genes)
Dioscorea dumetorum (0 genes)
Elaeis guineensis (0 genes)
Eragrostis curvula (0 genes)
Glycine max (0 genes)
Hordeum vulgare (0 genes)
Lolium perenne (6 genes)
Magnolia biondii (2 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (0 genes)
Oropetium thomaeum (8 genes)
Oryza alta (0 genes)
Oryza brachyantha (1 genes)
Oryza sativa Kitaake (4 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (0 genes)
Panicum hallii (1 genes)
Phyllostachys edulis (0 genes)
Physcomitrium patens (0 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (0 genes)
Secale cereale (1 genes)
Selaginella moellendorffii (1 genes)
Sequoiadendron giganteum (1 genes)
Setaria italica (1 genes)
Setaria viridis (0 genes)
Solanum lycopersicum (5 genes)
Sorghum bicolor (0 genes)
Spirodela polyrhiza (0 genes)
Triticum aestivum (4 genes)
Triticum dicoccoides (7 genes)
Triticum turgidum (7 genes)
Vanilla planifolia (0 genes)
Zea mays B73 (0 genes)
Zea mays B104 (1 genes)
Zostera marina (0 genes)
Zoysia japonica ssp. nagirizaki (0 genes)

Program Settings