Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g020160.2 Solanum lycopersicum HOM05M004830 ORTHO05M005802 3.2e-89 330.9 158 100.0
Potri.010G189700 Populus trichocarpa HOM05M004830 ORTHO05M005802 6.6e-42 173.7 149 57.7
Potri.008G067600 Populus trichocarpa HOM05M004830 ORTHO05M005802 8.3e-37 156.8 149 51.7
AT5G05680 Arabidopsis thaliana HOM05M004830 ORTHO05M005802 9.2e-36 153.3 159 47.2
Glyma.11G229000 Glycine max HOM05M004830 ORTHO05M005802 2.0e-35 152.1 126 57.9
Glyma.18G028167 Glycine max HOM05M004830 ORTHO05M005802 3.0e-34 148.3 142 52.1
Zosma03g08230 Zostera marina HOM05M004830 ORTHO05M005802 6.4e-21 104.0 136 42.6
Zosma03g14330 Zostera marina HOM05M004830 ORTHO05M005802 5.4e-20 100.9 148 39.2
Aco006557 Ananas comosus HOM05M004830 ORTHO05M005802 7.3e-17 90.5 144 39.6
p5.00_sc00008_p0158 Elaeis guineensis HOM05M004830 ORTHO05M005802 9.6e-17 90.1 131 42.0
CDE04G3215 Ceratophyllum demersum HOM05M004830 ORTHO05M005802 1.2e-16 89.7 141 36.9
Ma06_g18460 Musa acuminata HOM05M004830 ORTHO05M005802 8.1e-16 87.0 129 42.6
HPP92_019887 Vanilla planifolia HOM05M004830 ORTHO05M005802 4.0e-15 84.7 138 38.4
Dexi7B01G0018980 Digitaria exilis HOM05M004830 ORTHO05M005802 8.9e-15 83.6 146 34.2
Zm00007a00045845 Zea mays B104 HOM05M004830 ORTHO05M005802 1.2e-14 83.2 136 39.0
Sspon.05G0031110-1C Saccharum spontaneum HOM05M004830 ORTHO05M005802 2.6e-14 82.0 136 39.7
SEGI_03850 Sequoiadendron giganteum HOM05M004830 ORTHO05M005802 2.6e-14 82.0 151 31.8
SEGI_33727 Sequoiadendron giganteum HOM05M004830 ORTHO05M005802 2.6e-14 82.0 151 31.8
Sobic.006G208400 Sorghum bicolor HOM05M004830 ORTHO05M005802 3.4e-14 81.6 136 38.2
Dexi7A01G0018310 Digitaria exilis HOM05M004830 ORTHO05M005802 9.9e-14 80.1 130 36.2
V3.Lp_chr2_0G20792 Lolium perenne HOM05M004830 ORTHO05M005802 1.3e-13 79.7 136 33.8
Seita.7G231000 Setaria italica HOM05M004830 ORTHO05M005802 1.3e-13 79.7 136 36.8
Sevir.7G242400 Setaria viridis HOM05M004830 ORTHO05M005802 1.3e-13 79.7 136 36.8
Spipo22G0044900 Spirodela polyrhiza HOM05M004830 ORTHO05M005802 1.3e-13 79.7 210 30.0
Bradi5g21070 Brachypodium distachyon HOM05M004830 ORTHO05M005802 2.2e-13 79.0 138 34.1
GWHGAORA021519 Cenchrus purpureus HOM05M004830 ORTHO05M005802 6.4e-13 77.4 136 35.3
Pahal.7G284700 Panicum hallii HOM05M004830 ORTHO05M005802 8.4e-13 77.0 130 36.9
EJB05_55710 Eragrostis curvula HOM05M004830 ORTHO05M005802 1.1e-12 76.6 130 36.2
evm.TU.AsparagusV1_02.1271.V1.1 Asparagus officinalis HOM05M004830 ORTHO05M005802 5.4e-12 74.3 152 33.6
AET2Gv20949700 Aegilops tauschii HOM05M004830 ORTHO05M005802 7.1e-12 73.9 136 34.6
GWHGAZTO031333 Oryza alta HOM05M004830 ORTHO05M005802 7.1e-12 73.9 130 33.8
TraesCS2D03G0964600 Triticum aestivum HOM05M004830 ORTHO05M005802 7.1e-12 73.9 136 34.6
GWHGAORA063009 Cenchrus purpureus HOM05M004830 ORTHO05M005802 9.3e-12 73.6 137 36.5
PH02Gene10149 Phyllostachys edulis HOM05M004830 ORTHO05M005802 1.2e-11 73.2 136 34.6
DDU509G0124 Dioscorea dumetorum HOM05M004830 ORTHO05M005802 1.6e-11 72.8 113 38.1
GWHGASIY010592 Secale cereale HOM05M004830 ORTHO05M005802 1.6e-11 72.8 136 33.8
TraesCS2A03G1025300 Triticum aestivum HOM05M004830 ORTHO05M005802 1.6e-11 72.8 136 33.8
TRITD2Av1G250100 Triticum turgidum HOM05M004830 ORTHO05M005802 1.6e-11 72.8 136 33.8
Horvu_MOREX_2H01G615600 Hordeum vulgare HOM05M004830 ORTHO05M005802 3.5e-11 71.6 136 33.1
TraesCS2B03G1145000 Triticum aestivum HOM05M004830 ORTHO05M005802 1.0e-10 70.1 136 33.8
TRITD2Bv1G211790 Triticum turgidum HOM05M004830 ORTHO05M005802 1.0e-10 70.1 136 33.8
PH02Gene01729 Phyllostachys edulis HOM05M004830 ORTHO05M005802 1.3e-10 69.7 136 33.1
Sspon.05G0031110-1P Saccharum spontaneum HOM05M004830 ORTHO05M005802 3.9e-10 68.2 164 33.5
TRIDC2AG061950 Triticum dicoccoides HOM05M004830 ORTHO05M005802 9.9e-06 53.5 87 35.6


User provided reference genes

Program Settings