Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g013637.1 Solanum lycopersicum HOM05M000169 ORTHO05M020604 4.9e-48 193.4 96 100.0
Solyc11g013570.3 Solanum lycopersicum HOM05M000169 ORTHO05M005526 1.5e-44 181.8 96 93.8
Solyc11g013700.2 Solanum lycopersicum HOM05M000169 ORTHO05M005526 2.9e-40 167.5 96 87.5
Solyc11g050880.2 Solanum lycopersicum HOM05M000169 ORTHO05M005526 2.8e-35 151.0 96 75.0
Solyc12g040520.2 Solanum lycopersicum HOM05M000169 ORTHO05M005526 8.1e-35 149.4 96 74.0
p5.00_sc00105_p0034 Elaeis guineensis HOM05M000034 ORTHO05M005526 2.1e-30 134.8 96 67.7
CALSI_Maker00041208 Calamus simplicifolius HOM05M000169 ORTHO05M005526 3.5e-30 134.0 96 67.7
Glyma.15G012200 Glycine max HOM05M000169 ORTHO05M005526 6.0e-30 133.3 96 66.7
evm.TU.AsparagusV1_08.650.V1.1 Asparagus officinalis HOM05M000169 ORTHO05M005526 1.3e-29 132.1 96 68.8
Glyma.07G034000 Glycine max HOM05M000169 ORTHO05M005526 1.3e-29 132.1 96 66.7
Aco006724 Ananas comosus HOM05M000169 ORTHO05M005526 1.7e-29 131.7 96 67.7
Dexi5B01G0023830 Digitaria exilis HOM05M000169 ORTHO05M005526 1.7e-29 131.7 96 65.6
V3.Lp_chr6_0G7052 Lolium perenne HOM05M000169 ORTHO05M005526 1.7e-29 131.7 96 65.6
Sobic.003G259400 Sorghum bicolor HOM05M000169 ORTHO05M005526 1.7e-29 131.7 96 65.6
Zm00007a00029143 Zea mays B104 HOM05M000169 ORTHO05M005526 1.7e-29 131.7 96 65.6
Dexi5A01G0023630 Digitaria exilis HOM05M000169 ORTHO05M005526 2.3e-29 131.3 95 66.3
Pahal.5G203700 Panicum hallii HOM05M000169 ORTHO05M005526 2.3e-29 131.3 96 64.6
Solyc06g066810.3 Solanum lycopersicum HOM05M000169 ORTHO05M005526 2.3e-29 131.3 96 62.5
Ma04_g00770 Musa acuminata HOM05M000169 ORTHO05M005526 3.0e-29 131.0 96 65.6
CALSI_Maker00009138 Calamus simplicifolius HOM05M000169 ORTHO05M005526 3.9e-29 130.6 90 71.1
Misin06G225800 Miscanthus sinensis HOM05M000169 ORTHO05M005526 3.9e-29 130.6 96 64.6
Zm00001eb156560 Zea mays B73 HOM05M000169 ORTHO05M005526 3.9e-29 130.6 96 64.6
Zm00007a00008306 Zea mays B104 HOM05M000169 ORTHO05M005526 3.9e-29 130.6 96 64.6
p5.00_sc00018_p0251 Elaeis guineensis HOM05M000169 ORTHO05M005526 5.1e-29 130.2 96 66.7
Spipo14G0002700 Spirodela polyrhiza HOM05M000034 ORTHO05M005526 5.1e-29 130.2 96 64.6
EJB05_17396 Eragrostis curvula HOM05M000169 ORTHO05M005526 8.6e-29 129.4 96 63.5
DDU229G0019 Dioscorea dumetorum HOM05M000169 ORTHO05M005526 1.1e-28 129.0 96 65.6
HPP92_007681 Vanilla planifolia HOM05M000169 ORTHO05M005526 1.1e-28 129.0 96 64.6
Sspon.03G0009110-3D Saccharum spontaneum HOM05M000169 ORTHO05M005526 1.5e-28 128.6 93 65.6
AET3Gv20640200 Aegilops tauschii HOM05M000169 ORTHO05M005526 1.9e-28 128.3 96 64.6
Glyma.08G208100 Glycine max HOM05M000169 ORTHO05M005526 1.9e-28 128.3 96 64.6
Horvu_MOREX_3H01G374100 Hordeum vulgare HOM05M000169 ORTHO05M005526 1.9e-28 128.3 96 64.6
Ot_Chr3_g11571 Oropetium thomaeum HOM05M000169 ORTHO05M005526 1.9e-28 128.3 96 62.5
Potri.003G057800 Populus trichocarpa HOM05M000169 ORTHO05M005526 1.9e-28 128.3 96 64.6
Sspon.03G0009110-2B Saccharum spontaneum HOM05M000169 ORTHO05M005526 1.9e-28 128.3 92 66.3
GWHGASIY015720 Secale cereale HOM05M000169 ORTHO05M005526 1.9e-28 128.3 96 64.6
Solyc11g050800.1 Solanum lycopersicum HOM05M000169 ORTHO05M005526 1.9e-28 128.3 83 71.1
TraesCS3A03G0674900 Triticum aestivum HOM05M000169 ORTHO05M005526 1.9e-28 128.3 96 64.6
TraesCS3B03G0770700 Triticum aestivum HOM05M000169 ORTHO05M005526 1.9e-28 128.3 96 64.6
TraesCS3D03G0615700 Triticum aestivum HOM05M000169 ORTHO05M005526 1.9e-28 128.3 96 64.6
TRIDC3AG039610 Triticum dicoccoides HOM05M000169 ORTHO05M005526 1.9e-28 128.3 96 64.6
TRIDC3BG044750 Triticum dicoccoides HOM05M000169 ORTHO05M005526 1.9e-28 128.3 96 64.6
TRITD3Av1G176760 Triticum turgidum HOM05M000169 ORTHO05M005526 1.9e-28 128.3 96 64.6
TRITD3Bv1G158240 Triticum turgidum HOM05M000169 ORTHO05M005526 1.9e-28 128.3 96 64.6
DDU314G0196 Dioscorea dumetorum HOM05M000169 ORTHO05M005526 2.5e-28 127.9 90 70.0
V3.Lp_chr3_0G14878 Lolium perenne HOM05M000169 ORTHO05M005526 2.5e-28 127.9 96 63.5
Sobic.010G114200 Sorghum bicolor HOM05M000169 ORTHO05M005526 4.3e-28 127.1 96 64.6
OB01G35910 Oryza brachyantha HOM05M000169 ORTHO05M005526 5.6e-28 126.7 96 63.5
Bradi2g46700 Brachypodium distachyon HOM05M000169 ORTHO05M005526 7.3e-28 126.3 96 63.5
Asa4G05120 Allium sativum HOM05M000034 ORTHO05M005526 9.5e-28 125.9 96 63.5
Potri.001G176900 Populus trichocarpa HOM05M000169 ORTHO05M005526 1.2e-27 125.6 96 63.5
GWHGAZTO056759 Oryza alta HOM05M004159 ORTHO05M005526 1.6e-27 125.2 96 63.5
OsKitaake01g281000 Oryza sativa Kitaake HOM05M000169 ORTHO05M005526 1.6e-27 125.2 96 63.5
OsR498G0101775900.01 Oryza sativa ssp. indica HOM05M000169 ORTHO05M005526 1.6e-27 125.2 96 63.5
Os01g0683100 Oryza sativa ssp. japonica HOM05M000169 ORTHO05M005526 1.6e-27 125.2 96 63.5
evm.TU.AsparagusV1_03.3032.V1.1 Asparagus officinalis HOM05M000169 ORTHO05M005526 2.1e-27 124.8 96 63.5
SMO361G0775 Selaginella moellendorffii HOM05M000169 ORTHO05M005526 3.6e-27 124.0 96 63.5
Pp3c9_3800 Physcomitrium patens HOM05M000169 ORTHO05M005526 4.7e-27 123.6 96 64.6
Pp3c15_10930 Physcomitrium patens HOM05M000169 ORTHO05M005526 6.2e-27 123.2 96 63.5
AT1G80350 Arabidopsis thaliana HOM05M000169 ORTHO05M005526 1.4e-26 122.1 96 61.5
AagrBONN_evm.TU.Sc2ySwM_362.2153 Anthoceros agrestis HOM05M000169 ORTHO05M005526 5.8e-25 116.7 96 59.4
ATR0083G056 Amborella trichopoda HOM05M000169 ORTHO05M005526 9.9e-25 115.9 96 61.5
MCO07G767 Micromonas commoda HOM05M000169 ORTHO05M005526 1.3e-24 115.5 96 56.2
Mapoly0116s0028 Marchantia polymorpha HOM05M000169 ORTHO05M005526 1.7e-24 115.2 96 58.3
CBR_g38481 Chara braunii HOM05M000169 ORTHO05M005526 2.2e-24 114.8 96 58.3
V3.Lp_chr6_0G10004 Lolium perenne HOM05M000169 ORTHO05M005526 4.9e-24 113.6 92 58.7
GWHGAORA032057 Cenchrus purpureus HOM05M000169 ORTHO05M005526 9.2e-23 109.4 96 55.2
Zjn_sc00011.1.g00220.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM05M000169 ORTHO05M005526 9.2e-23 109.4 96 55.2
EJB05_55776 Eragrostis curvula HOM05M000169 ORTHO05M005526 1.6e-22 108.6 96 55.2
PRCOL_00007074 Prasinoderma coloniale HOM05M000169 ORTHO05M005526 1.0e-21 105.9 90 55.6
PH02Gene35011 Phyllostachys edulis HOM05M000169 ORTHO05M005526 8.7e-21 102.8 96 54.2
Cre10.g427600 Chlamydomonas reinhardtii HOM05M000169 ORTHO05M005526 2.5e-20 101.3 96 52.1
Sspon.03G0009110-1A Saccharum spontaneum HOM05M000169 ORTHO05M005526 3.3e-20 100.9 69 72.5
Seita.5G273100 Setaria italica HOM05M000169 ORTHO05M005526 5.6e-20 100.1 96 51.0
GWHGAZTO004421 Oryza alta HOM05M004159 ORTHO05M005526 2.8e-19 97.8 80 62.5
PH02Gene20042 Phyllostachys edulis HOM05M000169 ORTHO05M005526 8.1e-19 96.3 96 51.0
Asa3G01743 Allium sativum HOM05M000169 ORTHO05M020604 9.0e-18 92.8 90 48.9
MBI04_g11927_MAGBIO Magnolia biondii HOM05M000169 ORTHO05M005526 3.4e-17 90.9 96 51.0
Zosma01g23970 Zostera marina HOM05M000169 ORTHO05M005526 5.8e-17 90.1 96 47.9
DDU230G0019 Dioscorea dumetorum HOM05M000169 ORTHO05M005526 2.2e-16 88.2 63 66.7
Solyc10g019190.2 Solanum lycopersicum HOM05M000169 ORTHO05M005526 1.4e-15 85.5 57 68.4
Glyma.13G361600 Glycine max HOM05M000169 ORTHO05M005526 3.2e-15 84.3 96 45.8
PRCOL_00006903 Prasinoderma coloniale HOM05M000169 ORTHO05M005526 6.0e-14 80.1 93 43.0
CDE06G0196 Ceratophyllum demersum HOM05M000169 ORTHO05M020604 6.6e-13 76.6 60 61.7
Potri.017G013601 Populus trichocarpa HOM05M000169 ORTHO05M005526 5.6e-12 73.6 96 43.8
GWHGAORA044358 Cenchrus purpureus HOM05M000169 ORTHO05M005526 1.5e-09 65.5 58 55.2
Spipo9G0062100 Spirodela polyrhiza HOM05M000169 ORTHO05M008296 3.4e-09 64.3 87 35.6
Glyma.05G077900 Glycine max HOM05M000169 ORTHO05M008296 4.5e-09 63.9 86 36.0
DDU049G0041 Dioscorea dumetorum HOM05M000169 ORTHO05M008296 5.8e-09 63.5 83 37.3
DDU709G0017 Dioscorea dumetorum HOM05M000169 ORTHO05M008296 5.8e-09 63.5 83 37.3
evm.TU.AsparagusV1_09.1335.V1.1 Asparagus officinalis HOM05M000169 ORTHO05M008296 9.9e-09 62.8 83 36.1
MBI07_g34625_MAGBIO Magnolia biondii HOM05M000169 ORTHO05M008296 9.9e-09 62.8 83 37.3
SEGI_09594 Sequoiadendron giganteum HOM05M000169 ORTHO05M008296 9.9e-09 62.8 86 34.9
Bradi4g07862 Brachypodium distachyon HOM05M000169 ORTHO05M008296 1.3e-08 62.4 83 38.6
Glyma.19G071600 Glycine max HOM05M000169 ORTHO05M008296 1.3e-08 62.4 86 34.9
Zm00001eb133210 Zea mays B73 HOM05M000169 ORTHO05M008296 1.7e-08 62.0 83 36.1
p5.00_sc00125_p0028 Elaeis guineensis HOM05M000169 ORTHO05M008296 2.2e-08 61.6 83 36.1
Potri.001G331200 Populus trichocarpa HOM05M000169 ORTHO05M008296 2.2e-08 61.6 86 34.9
Asa8G03814 Allium sativum HOM05M000169 ORTHO05M008296 2.9e-08 61.2 87 35.6
Solyc02g094100.4 Solanum lycopersicum HOM05M000169 ORTHO05M008296 2.9e-08 61.2 87 35.6
GWHGAORA037381 Cenchrus purpureus HOM05M000169 ORTHO05M008296 3.8e-08 60.8 83 34.9
Dexi3B01G0030390 Digitaria exilis HOM05M000169 ORTHO05M008296 3.8e-08 60.8 83 34.9
V3.Lp_chr1_0G11352 Lolium perenne HOM05M000169 ORTHO05M008296 3.8e-08 60.8 83 37.3
Seita.3G300300 Setaria italica HOM05M000169 ORTHO05M008296 3.8e-08 60.8 83 34.9
Sevir.3G322800 Setaria viridis HOM05M000169 ORTHO05M008296 3.8e-08 60.8 83 34.9
AET5Gv20280900 Aegilops tauschii HOM05M000169 ORTHO05M008296 4.9e-08 60.5 83 36.1
PH02Gene25585 Phyllostachys edulis HOM05M000169 ORTHO05M008296 4.9e-08 60.5 86 34.9
GWHGASIY025107 Secale cereale HOM05M000169 ORTHO05M008296 4.9e-08 60.5 83 36.1
Sobic.008G092800 Sorghum bicolor HOM05M000169 ORTHO05M008296 4.9e-08 60.5 83 34.9
TraesCS5A03G0292900 Triticum aestivum HOM05M000169 ORTHO05M008296 4.9e-08 60.5 83 36.1
TraesCS5B03G0284000 Triticum aestivum HOM05M000169 ORTHO05M008296 4.9e-08 60.5 83 36.1
TraesCS5D03G0309300 Triticum aestivum HOM05M000169 ORTHO05M008296 4.9e-08 60.5 83 36.1
TRIDC5AG017300 Triticum dicoccoides HOM05M000169 ORTHO05M008296 4.9e-08 60.5 83 36.1
TRITD5Av1G073320 Triticum turgidum HOM05M000169 ORTHO05M008296 4.9e-08 60.5 83 36.1
TRITD5Bv1G056690 Triticum turgidum HOM05M000169 ORTHO05M008296 4.9e-08 60.5 83 36.1
ATR0561G019 Amborella trichopoda HOM05M000169 ORTHO05M008296 6.4e-08 60.1 83 37.3
Aco003697 Ananas comosus HOM05M000169 ORTHO05M008296 6.4e-08 60.1 83 36.1
AagrBONN_evm.TU.Sc2ySwM_368.1666 Anthoceros agrestis HOM05M000169 ORTHO05M007086 8.4e-08 59.7 95 32.6
EJB05_01797 Eragrostis curvula HOM05M000169 ORTHO05M008296 8.4e-08 59.7 83 34.9
Horvu_MOREX_5H01G180300 Hordeum vulgare HOM05M000169 ORTHO05M008296 8.4e-08 59.7 83 34.9
AT3G27120 Arabidopsis thaliana HOM05M000169 ORTHO05M008296 1.1e-07 59.3 83 34.9
Pahal.3G414800 Panicum hallii HOM05M000169 ORTHO05M008296 1.1e-07 59.3 84 33.3
Pp3c4_18320 Physcomitrium patens HOM05M000169 ORTHO05M008296 1.1e-07 59.3 88 31.8
SMO134G0249 Selaginella moellendorffii HOM05M000169 ORTHO05M008296 1.1e-07 59.3 87 34.5
SMO182G0002 Selaginella moellendorffii HOM05M000169 ORTHO05M008296 1.1e-07 59.3 87 34.5
CBR_g26520 Chara braunii HOM05M000169 ORTHO05M008296 1.4e-07 58.9 86 33.7
Potri.018G053150 Populus trichocarpa HOM05M000258 ORTHO05M000336 1.4e-07 58.9 45 64.4
Misin14G083000 Miscanthus sinensis HOM05M000169 ORTHO05M008296 1.9e-07 58.5 83 33.7
Ot_Chr10_g26650 Oropetium thomaeum HOM05M000169 ORTHO05M008296 1.9e-07 58.5 83 34.9
PH02Gene42212 Phyllostachys edulis HOM05M000169 ORTHO05M008296 1.9e-07 58.5 83 34.9
Misin14G082800 Miscanthus sinensis HOM05M000169 ORTHO05M008296 2.4e-07 58.2 83 33.7
OsKitaake12g116800 Oryza sativa Kitaake HOM05M000169 ORTHO05M008296 4.2e-07 57.4 83 34.9
OsR498G1221499700.01 Oryza sativa ssp. indica HOM05M000169 ORTHO05M008296 4.2e-07 57.4 83 34.9
Os12g0443800 Oryza sativa ssp. japonica HOM05M000169 ORTHO05M008296 4.2e-07 57.4 83 34.9
AagrBONN_evm.TU.Sc2ySwM_228.761 Anthoceros agrestis HOM05M000169 ORTHO05M008296 5.4e-07 57.0 86 30.2
GWHGAORA002473 Cenchrus purpureus HOM05M000169 ORTHO05M008296 7.1e-07 56.6 97 32.0
Ma06_g29380 Musa acuminata HOM05M000169 ORTHO05M008296 7.1e-07 56.6 87 33.3
GWHGAZTO066324 Oryza alta HOM05M000169 ORTHO05M008296 7.1e-07 56.6 83 34.9
Dexi1A01G0029120 Digitaria exilis HOM05M000169 ORTHO05M003511 9.3e-07 56.2 94 31.9
DexiUA01G0022240 Digitaria exilis HOM05M000169 ORTHO05M003511 9.3e-07 56.2 94 31.9
Mapoly0035s0108 Marchantia polymorpha HOM05M000169 ORTHO05M008296 9.3e-07 56.2 86 30.2
Zosma05g24850 Zostera marina HOM05M000169 ORTHO05M008296 1.2e-06 55.8 87 32.2
Zjn_sc00010.1.g04800.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM05M000169 ORTHO05M008296 1.2e-06 55.8 97 32.0
AT3G19740 Arabidopsis thaliana HOM05M000169 ORTHO05M003511 1.6e-06 55.5 93 29.0
SEGI_11768 Sequoiadendron giganteum HOM05M000169 ORTHO05M007086 1.6e-06 55.5 93 31.2
Dexi1B01G0026340 Digitaria exilis HOM05M000169 ORTHO05M003511 2.1e-06 55.1 94 30.9
Mapoly0134s0039 Marchantia polymorpha HOM05M000169 ORTHO05M001040 2.1e-06 55.1 103 30.1
Zosma05g15130 Zostera marina HOM05M000169 ORTHO05M008296 2.1e-06 55.1 87 32.2
OB12G19270 Oryza brachyantha HOM05M000169 ORTHO05M008296 2.7e-06 54.7 83 34.9
CALSI_Maker00010405 Calamus simplicifolius HOM05M000169 ORTHO05M008296 3.5e-06 54.3 76 35.5
SMO356G0378 Selaginella moellendorffii HOM05M000169 ORTHO05M001040 4.6e-06 53.9 107 28.0
Zosma06g03220 Zostera marina HOM05M000169 ORTHO05M007086 4.6e-06 53.9 92 32.6

Aegilops tauschii (2 genes)
Allium sativum (3 genes)
Amborella trichopoda (2 genes)
Ananas comosus (2 genes)
Anthoceros agrestis (3 genes)
Arabidopsis thaliana (3 genes)
Asparagus officinalis (3 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (3 genes)
Cenchrus purpureus (4 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (2 genes)
Chlamydomonas reinhardtii (1 genes)
Digitaria exilis (6 genes)
Dioscorea dumetorum (5 genes)
Elaeis guineensis (3 genes)
Eragrostis curvula (3 genes)
Glycine max (6 genes)
Hordeum vulgare (2 genes)
Lolium perenne (4 genes)
Magnolia biondii (2 genes)
Marchantia polymorpha (3 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (2 genes)
Oryza alta (3 genes)
Oryza brachyantha (2 genes)
Oryza sativa Kitaake (2 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (2 genes)
Panicum hallii (2 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (3 genes)
Populus trichocarpa (5 genes)
Prasinoderma coloniale (2 genes)
Saccharum spontaneum (3 genes)
Secale cereale (2 genes)
Selaginella moellendorffii (4 genes)
Sequoiadendron giganteum (2 genes)
Setaria italica (2 genes)
Setaria viridis (1 genes)
Solanum lycopersicum (9 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (6 genes)
Triticum dicoccoides (3 genes)
Triticum turgidum (4 genes)
Vanilla planifolia (1 genes)
Zea mays B73 (2 genes)
Zea mays B104 (2 genes)
Zostera marina (4 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

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