Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g013280.1 Solanum lycopersicum HOM05M004304 ORTHO05M005660 0.0e+00 2550.0 1288 100.0
Potri.019G025200 Populus trichocarpa HOM05M004304 ORTHO05M005660 0.0e+00 2187.9 1288 84.4
Glyma.19G250600 Glycine max HOM05M004304 ORTHO05M005660 0.0e+00 2173.3 1289 83.9
Glyma.03G253000 Glycine max HOM05M004304 ORTHO05M005660 0.0e+00 2172.5 1289 84.1
Potri.013G051200 Populus trichocarpa HOM05M004304 ORTHO05M005660 0.0e+00 2153.6 1288 83.5
AT5G18410 Arabidopsis thaliana HOM05M004304 ORTHO05M005660 0.0e+00 2110.9 1286 81.6
Aco014624 Ananas comosus HOM05M004304 ORTHO05M005660 0.0e+00 1959.1 1293 76.5
Pahal.9G608000 Panicum hallii HOM05M004304 ORTHO05M005660 0.0e+00 1937.9 1293 75.7
Seita.9G543000 Setaria italica HOM05M004304 ORTHO05M005660 0.0e+00 1934.5 1293 75.3
Sevir.9G547400 Setaria viridis HOM05M004304 ORTHO05M005660 0.0e+00 1934.5 1293 75.3
Bradi1g75470 Brachypodium distachyon HOM05M004304 ORTHO05M005660 0.0e+00 1931.8 1290 75.1
TRITD4Bv1G177880 Triticum turgidum HOM05M004304 ORTHO05M005660 0.0e+00 1927.5 1290 74.8
OsKitaake03g035600 Oryza sativa Kitaake HOM05M004304 ORTHO05M005660 0.0e+00 1924.8 1293 75.3
OsR498G0305218900.01 Oryza sativa ssp. indica HOM05M004304 ORTHO05M005660 0.0e+00 1924.8 1293 75.3
Os03g0143800 Oryza sativa ssp. japonica HOM05M004304 ORTHO05M005660 0.0e+00 1924.8 1293 75.3
TRIDC4BG052530 Triticum dicoccoides HOM05M004304 ORTHO05M005660 0.0e+00 1923.7 1290 74.7
GWHGASIY037589 Secale cereale HOM05M004304 ORTHO05M005660 0.0e+00 1922.1 1290 74.8
AET4Gv20738700 Aegilops tauschii HOM05M004304 ORTHO05M005660 0.0e+00 1921.7 1290 74.7
V3.Lp_chr4_0G26666 Lolium perenne HOM05M004304 ORTHO05M005660 0.0e+00 1919.8 1290 74.7
OB03G13480 Oryza brachyantha HOM05M004304 ORTHO05M005660 0.0e+00 1917.1 1292 74.8
TRITD4Av1G228390 Triticum turgidum HOM05M004304 ORTHO05M005660 0.0e+00 1914.0 1293 74.5
Ma04_g00540 Musa acuminata HOM05M004304 ORTHO05M005660 0.0e+00 1912.5 1290 74.3
Sobic.001G507200 Sorghum bicolor HOM05M004304 ORTHO05M005660 0.0e+00 1912.5 1293 74.9
Ot_Chr4_g00052 Oropetium thomaeum HOM05M004304 ORTHO05M005660 0.0e+00 1911.7 1293 74.6
Zm00001eb003550 Zea mays B73 HOM05M004304 ORTHO05M005660 0.0e+00 1892.9 1290 74.2
Sspon.01G0002550-2D Saccharum spontaneum HOM05M004304 ORTHO05M005660 0.0e+00 1834.3 1281 73.0
Zosma06g19690 Zostera marina HOM05M004304 ORTHO05M005660 0.0e+00 1832.4 1293 71.6
TraesCS4B03G0803500 Triticum aestivum HOM05M004304 ORTHO05M005660 0.0e+00 1832.0 1290 71.7
TraesCS4D03G0720300 Triticum aestivum HOM05M004304 ORTHO05M005660 0.0e+00 1830.5 1290 71.7
CALSI_Maker00046841 Calamus simplicifolius HOM05M004304 ORTHO05M005660 0.0e+00 1829.3 1441 66.6
GWHGAORA054417 Cenchrus purpureus HOM05M004304 ORTHO05M005660 0.0e+00 1810.0 1300 72.1
Spipo11G0059700 Spirodela polyrhiza HOM05M004304 ORTHO05M005660 0.0e+00 1808.9 1290 71.3
Horvu_MOREX_4H01G461200 Hordeum vulgare HOM05M004304 ORTHO05M005660 0.0e+00 1807.3 1290 71.3
DDU407G0264 Dioscorea dumetorum HOM05M004304 ORTHO05M005660 0.0e+00 1706.4 1451 63.4
EJB05_08056 Eragrostis curvula HOM05M004304 ORTHO05M005660 0.0e+00 1697.2 1293 68.5
evm.TU.AsparagusV1_04.263.V1.1 Asparagus officinalis HOM05M004304 ORTHO05M005660 0.0e+00 1676.4 1109 75.9
HPP92_013019 Vanilla planifolia HOM05M004304 ORTHO05M005660 0.0e+00 1526.9 1210 66.0
AagrBONN_evm.TU.Sc2ySwM_344.4016 Anthoceros agrestis HOM05M004304 ORTHO05M005660 0.0e+00 1511.5 1293 60.0
Mapoly0078s0045 Marchantia polymorpha HOM05M004304 ORTHO05M005660 0.0e+00 1478.4 1300 58.2
Pp3c21_8020 Physcomitrium patens HOM05M004304 ORTHO05M005660 0.0e+00 1469.1 1329 56.6
SMO348G0052 Selaginella moellendorffii HOM05M004304 ORTHO05M005660 0.0e+00 1453.7 1290 56.9
Pp3c2_6040 Physcomitrium patens HOM05M004304 ORTHO05M005660 0.0e+00 1313.5 1309 52.3
GWHGAZTO000461 Oryza alta HOM05M004304 ORTHO05M005660 0.0e+00 1312.4 937 70.4
GWHGAZTO022088 Oryza alta HOM05M004304 ORTHO05M005660 0.0e+00 1306.6 937 70.2
GWHGAORA026198 Cenchrus purpureus HOM05M004304 ORTHO05M005660 0.0e+00 1291.2 916 70.6
PH02Gene03638 Phyllostachys edulis HOM05M004304 ORTHO05M005660 0.0e+00 1278.1 942 68.4
ATR0787G096 Amborella trichopoda HOM05M004304 ORTHO05M005660 0.0e+00 1265.8 917 69.0
Asa5G03509 Allium sativum HOM05M004304 ORTHO05M005660 0.0e+00 1228.4 848 72.6
Misin02G479700 Miscanthus sinensis HOM05M004304 ORTHO05M005660 0.0e+00 1208.0 767 79.3
Misin01G484800 Miscanthus sinensis HOM05M004304 ORTHO05M005660 0.0e+00 1144.4 708 81.1
GWHGAORA054376 Cenchrus purpureus HOM05M004304 ORTHO05M005660 1.8e-286 989.2 817 62.9
p5.00_sc00140_p0013 Elaeis guineensis HOM05M004304 ORTHO05M005660 7.0e-251 870.9 685 66.3
Zm00007a00023886 Zea mays B104 HOM05M004304 ORTHO05M005660 5.8e-221 771.5 581 67.3
GWHGASIY037648 Secale cereale HOM05M004304 ORTHO05M005660 1.9e-195 686.8 507 67.3
Misin01G484700 Miscanthus sinensis HOM05M004304 ORTHO05M005660 2.5e-195 686.4 510 67.8
Zm00007a00023884 Zea mays B104 HOM05M004304 ORTHO05M005660 9.3e-195 684.5 445 76.6
SEGI_41506 Sequoiadendron giganteum HOM05M004304 ORTHO05M005660 7.4e-176 621.7 420 72.9
p5.00_sc00140_p0011 Elaeis guineensis HOM05M004304 ORTHO05M005660 6.3e-167 592.0 346 87.3
ATR0787G220 Amborella trichopoda HOM05M004304 ORTHO05M005660 5.3e-166 589.0 347 87.0
CDE01G0796 Ceratophyllum demersum HOM05M004304 ORTHO05M005660 1.6e-165 587.4 451 67.0
GWHGAZTO022087 Oryza alta HOM05M004304 ORTHO05M005660 4.0e-161 572.8 384 78.1
GWHGAZTO000460 Oryza alta HOM05M004304 ORTHO05M005660 1.5e-160 570.9 411 74.0
Dexi9B01G0046730 Digitaria exilis HOM05M004304 ORTHO05M005660 8.3e-151 538.5 412 67.2
CDE01G0576 Ceratophyllum demersum HOM05M004304 ORTHO05M005660 9.2e-150 535.0 376 71.5
PH02Gene11038 Phyllostachys edulis HOM05M004304 ORTHO05M005660 2.0e-149 533.9 384 69.8
CBR_g23328 Chara braunii HOM05M004304 ORTHO05M005660 2.7e-149 533.5 637 45.8
Misin02G477700 Miscanthus sinensis HOM05M004304 ORTHO05M005660 2.6e-136 490.3 370 66.2
p5.00_sc00140_p0012 Elaeis guineensis HOM05M004304 ORTHO05M005660 5.6e-123 446.0 282 75.2
HPP92_013016 Vanilla planifolia HOM05M004304 ORTHO05M005660 3.6e-122 443.4 301 72.1
HPP92_013015 Vanilla planifolia HOM05M004304 ORTHO05M005660 8.4e-111 405.6 347 62.5
PH02Gene03639 Phyllostachys edulis HOM05M004304 ORTHO05M005660 1.1e-107 395.2 222 89.6
Asa5G03510 Allium sativum HOM05M004304 ORTHO05M005660 1.3e-90 338.6 238 70.6
SEGI_00068 Sequoiadendron giganteum HOM05M004304 ORTHO05M005660 2.1e-85 321.2 264 62.5
Zm00007a00023883 Zea mays B104 HOM05M004304 ORTHO05M005660 5.1e-84 316.6 184 85.9
CBR_g23326 Chara braunii HOM05M004304 ORTHO05M005660 7.2e-70 269.6 466 33.9
Zjn_sc00002.1.g14620.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM05M004304 ORTHO05M005660 6.3e-66 256.5 135 91.9
Misin02G477800 Miscanthus sinensis HOM05M004304 ORTHO05M005660 2.2e-50 204.9 142 73.9
PH02Gene45152 Phyllostachys edulis HOM05M004304 ORTHO05M021937 3.1e-49 201.1 142 71.8
evm.TU.AsparagusV1_04.277.V1.1 Asparagus officinalis HOM05M000980 ORTHO05M002686 2.0e-43 181.8 132 68.9
CDE02G3044 Ceratophyllum demersum HOM05M004304 ORTHO05M005660 1.7e-42 178.7 127 67.7
CBR_g74560 Chara braunii HOM05M004304 ORTHO05M005660 7.2e-38 163.3 161 53.4
SEGI_02952 Sequoiadendron giganteum HOM05M004304 ORTHO05M005660 4.4e-35 154.1 113 66.4
PH02Gene29204 Phyllostachys edulis HOM05M004304 ORTHO05M021937 3.7e-34 151.0 118 66.1
OB03G13470 Oryza brachyantha HOM05M001479 ORTHO05M001485 1.6e-32 145.6 101 71.3
Asa5G03508 Allium sativum HOM05M004304 ORTHO05M005660 2.9e-31 141.4 90 81.1
SEGI_33538 Sequoiadendron giganteum HOM05M004304 ORTHO05M005660 2.5e-30 138.3 95 63.2
SEGI_28731 Sequoiadendron giganteum HOM05M004304 ORTHO05M005660 1.1e-25 122.9 133 47.4
Sspon.01G0002550-1A Saccharum spontaneum HOM05M004304 ORTHO05M005660 1.7e-23 115.5 68 80.9
HPP92_013017 Vanilla planifolia HOM05M004304 ORTHO05M021937 1.6e-13 82.4 54 75.9
MisinT564500 Miscanthus sinensis HOM05M004304 ORTHO05M021937 2.1e-08 65.5 59 57.6
Aco022189 Ananas comosus HOM05M004304 ORTHO05M005660 1.7e-07 62.4 80 43.8

Aegilops tauschii (1 genes)
Allium sativum (3 genes)
Amborella trichopoda (2 genes)
Ananas comosus (2 genes)
Anthoceros agrestis (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus purpureus (3 genes)
Ceratophyllum demersum (3 genes)
Chara braunii (3 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (1 genes)
Dioscorea dumetorum (1 genes)
Elaeis guineensis (3 genes)
Eragrostis curvula (1 genes)
Glycine max (2 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Magnolia biondii (0 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (6 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (1 genes)
Oryza alta (4 genes)
Oryza brachyantha (2 genes)
Oryza sativa Kitaake (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Panicum hallii (1 genes)
Phyllostachys edulis (5 genes)
Physcomitrium patens (2 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (2 genes)
Secale cereale (2 genes)
Selaginella moellendorffii (1 genes)
Sequoiadendron giganteum (5 genes)
Setaria italica (1 genes)
Setaria viridis (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (2 genes)
Triticum dicoccoides (1 genes)
Triticum turgidum (2 genes)
Vanilla planifolia (4 genes)
Zea mays B73 (1 genes)
Zea mays B104 (3 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

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