Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g011450.2 Solanum lycopersicum HOM05M003930 ORTHO05M004688 6.2e-84 313.2 142 100.0
Potri.017G131900 Populus trichocarpa HOM05M003930 ORTHO05M004688 3.9e-70 267.3 137 83.2
Potri.017G132500 Populus trichocarpa HOM05M003930 ORTHO05M004688 2.5e-64 248.1 134 79.1
Glyma.18G041500 Glycine max HOM05M003930 ORTHO05M004688 7.2e-64 246.5 142 75.4
Spipo15G0038600 Spirodela polyrhiza HOM05M003930 ORTHO05M004688 7.9e-63 243.0 141 75.9
Glyma.11G215100 Glycine max HOM05M003930 ORTHO05M004688 2.0e-61 238.4 127 78.7
Ma02_g20560 Musa acuminata HOM05M003930 ORTHO05M004688 2.0e-61 238.4 138 73.9
MBI19_g44856_MAGBIO Magnolia biondii HOM05M003930 ORTHO05M004688 3.3e-61 237.7 132 77.3
Glyma.18G041600 Glycine max HOM05M003930 ORTHO05M004688 2.2e-60 235.0 134 75.4
AT5G16940 Arabidopsis thaliana HOM05M003930 ORTHO05M004688 2.8e-60 234.6 134 73.1
Potri.017G132000 Populus trichocarpa HOM05M003930 ORTHO05M004688 6.3e-60 233.4 131 76.3
p5.00_sc00004_p0344 Elaeis guineensis HOM05M003930 ORTHO05M004688 1.8e-59 231.9 142 70.4
evm.TU.AsparagusV1_08.2864.V1.1 Asparagus officinalis HOM05M003930 ORTHO05M004688 9.1e-59 229.6 135 73.3
Zjn_sc00039.1.g04000.1.am.mk Zoysia japonica ssp. nagirizaki HOM05M003930 ORTHO05M004688 1.5e-58 228.8 134 72.4
ATR0753G109 Amborella trichopoda HOM05M003930 ORTHO05M004688 2.2e-57 224.9 139 71.2
Zosma06g28350 Zostera marina HOM05M003930 ORTHO05M004688 5.0e-57 223.8 131 69.5
Aco001028 Ananas comosus HOM05M003930 ORTHO05M004688 1.4e-56 222.2 133 70.7
EJB05_42949 Eragrostis curvula HOM05M003930 ORTHO05M004688 3.2e-56 221.1 133 69.2
Zjn_sc00018.1.g06710.1.am.mk Zoysia japonica ssp. nagirizaki HOM05M003930 ORTHO05M004688 3.2e-56 221.1 136 69.1
Zm00007a00051714 Zea mays B104 HOM05M003930 ORTHO05M004688 1.6e-55 218.8 138 68.1
Seita.2G198000 Setaria italica HOM05M003930 ORTHO05M004688 2.1e-55 218.4 134 70.1
Sevir.2G205600 Setaria viridis HOM05M003930 ORTHO05M004688 2.1e-55 218.4 134 70.1
EJB05_42937 Eragrostis curvula HOM05M003930 ORTHO05M004688 4.7e-55 217.2 129 71.3
Horvu_MOREX_5H01G345500 Hordeum vulgare HOM05M003930 ORTHO05M004688 7.9e-55 216.5 129 71.3
Misin03G162700 Miscanthus sinensis HOM05M003930 ORTHO05M004688 7.9e-55 216.5 137 68.6
GWHGASIY026084 Secale cereale HOM05M003930 ORTHO05M004688 7.9e-55 216.5 129 72.1
Ot_Chr2_g06014 Oropetium thomaeum HOM05M003930 ORTHO05M004688 1.0e-54 216.1 129 70.5
SEGI_33705 Sequoiadendron giganteum HOM05M003930 ORTHO05M004688 1.0e-54 216.1 131 68.7
PH02Gene48821 Phyllostachys edulis HOM05M003930 ORTHO05M004688 1.8e-54 215.3 136 66.2
Misin04G178900 Miscanthus sinensis HOM05M003930 ORTHO05M004688 2.3e-54 214.9 137 68.6
Pahal.2G256900 Panicum hallii HOM05M003930 ORTHO05M004688 2.3e-54 214.9 138 67.4
Sobic.002G194900 Sorghum bicolor HOM05M003930 ORTHO05M004688 2.3e-54 214.9 137 68.6
TraesCS5B03G0539400 Triticum aestivum HOM05M003930 ORTHO05M004688 2.3e-54 214.9 129 70.5
TRITD5Bv1G123840 Triticum turgidum HOM05M003930 ORTHO05M004688 2.3e-54 214.9 129 70.5
Sspon.02G0015080-1P Saccharum spontaneum HOM05M003930 ORTHO05M004688 3.0e-54 214.5 129 70.5
Sspon.02G0015080-2B Saccharum spontaneum HOM05M003930 ORTHO05M004688 3.0e-54 214.5 129 70.5
Sobic.002G195000 Sorghum bicolor HOM05M003930 ORTHO05M004688 3.0e-54 214.5 137 67.2
V3.Lp_chr5_0G12458 Lolium perenne HOM05M003930 ORTHO05M004688 5.1e-54 213.8 134 69.4
MisinT568900 Miscanthus sinensis HOM05M003930 ORTHO05M004688 5.1e-54 213.8 129 70.5
Zm00001eb099200 Zea mays B73 HOM05M003930 ORTHO05M004688 5.1e-54 213.8 129 69.8
Bradi4g29740 Brachypodium distachyon HOM05M003930 ORTHO05M004688 6.7e-54 213.4 134 67.2
GWHGAORA008201 Cenchrus purpureus HOM05M003930 ORTHO05M004688 1.1e-53 212.6 129 69.8
Misin04G179100 Miscanthus sinensis HOM05M003930 ORTHO05M004688 1.1e-53 212.6 129 69.8
EJB05_42938 Eragrostis curvula HOM05M003930 ORTHO05M004688 2.0e-53 211.8 134 66.4
EJB05_42952 Eragrostis curvula HOM05M003930 ORTHO05M004688 2.0e-53 211.8 134 66.4
GWHGASIY026083 Secale cereale HOM05M003930 ORTHO05M004688 2.0e-53 211.8 129 70.5
Zm00007a00042413 Zea mays B104 HOM05M003930 ORTHO05M004688 2.6e-53 211.5 129 69.0
Sspon.02G0015080-1T Saccharum spontaneum HOM05M003930 ORTHO05M004688 3.3e-53 211.1 129 69.0
AET5Gv20498200 Aegilops tauschii HOM05M003930 ORTHO05M004688 4.4e-53 210.7 129 69.8
TraesCS5D03G0493000 Triticum aestivum HOM05M003930 ORTHO05M004688 4.4e-53 210.7 129 69.8
TraesCS5A03G0527800 Triticum aestivum HOM05M003930 ORTHO05M004688 5.7e-53 210.3 129 69.8
TRIDC5AG032870 Triticum dicoccoides HOM05M003930 ORTHO05M004688 5.7e-53 210.3 129 69.8
Pp3c3_1640 Physcomitrium patens HOM05M003930 ORTHO05M004688 1.3e-52 209.1 134 67.2
GWHGAZTO097660 Oryza alta HOM05M003930 ORTHO05M004688 1.7e-52 208.8 129 68.2
Seita.2G198100 Setaria italica HOM05M003930 ORTHO05M004688 2.2e-52 208.4 131 67.2
Sevir.2G205700 Setaria viridis HOM05M003930 ORTHO05M004688 2.2e-52 208.4 131 67.2
Pahal.2G257000 Panicum hallii HOM05M003930 ORTHO05M004688 3.7e-52 207.6 131 69.5
GWHGAZTO051229 Oryza alta HOM05M003930 ORTHO05M004688 1.4e-51 205.7 129 66.7
GWHGAORA064664 Cenchrus purpureus HOM05M003930 ORTHO05M004688 2.4e-51 204.9 133 67.7
Mapoly0175s0005 Marchantia polymorpha HOM05M003930 ORTHO05M004688 2.4e-51 204.9 131 67.2
OB09G16110 Oryza brachyantha HOM05M003930 ORTHO05M004688 4.1e-51 204.1 129 67.4
Zm00007a00042410 Zea mays B104 HOM05M003930 ORTHO05M004688 4.1e-51 204.1 128 68.8
GWHGAORA008200 Cenchrus purpureus HOM05M003930 ORTHO05M004688 1.2e-50 202.6 122 69.7
SMO134G0286 Selaginella moellendorffii HOM05M003930 ORTHO05M004688 2.6e-50 201.4 130 63.8
Zm00001eb099210 Zea mays B73 HOM05M003930 ORTHO05M004688 4.5e-50 200.7 129 67.4
Zjn_sc00039.1.g04010.1.am.mk Zoysia japonica ssp. nagirizaki HOM05M003930 ORTHO05M004688 5.9e-50 200.3 121 70.2
Aco014562 Ananas comosus HOM05M003930 ORTHO05M004688 7.7e-50 199.9 120 70.0
OsKitaake09g090700 Oryza sativa Kitaake HOM05M003930 ORTHO05M004688 7.7e-50 199.9 129 64.3
OsR498G0917394800.01 Oryza sativa ssp. indica HOM05M003930 ORTHO05M004688 7.7e-50 199.9 129 64.3
Os09g0397700 Oryza sativa ssp. japonica HOM05M003930 ORTHO05M004688 7.7e-50 199.9 129 64.3
GWHGAORA064665 Cenchrus purpureus HOM05M003930 ORTHO05M004688 1.3e-49 199.1 122 68.9
PH02Gene41296 Phyllostachys edulis HOM05M003930 ORTHO05M004688 1.1e-48 196.1 119 69.7
AagrBONN_evm.TU.Sc2ySwM_117.508 Anthoceros agrestis HOM05M003930 ORTHO05M004688 9.4e-48 193.0 133 58.6
p5.00_sc00001_p0659 Elaeis guineensis HOM05M003930 ORTHO05M004688 2.7e-47 191.4 118 66.1
SMO182G0004 Selaginella moellendorffii HOM05M003930 ORTHO05M004688 3.6e-47 191.0 130 62.3
Zm00001eb099170 Zea mays B73 HOM05M003930 ORTHO05M004688 6.1e-47 190.3 107 72.9
SMO134G0172 Selaginella moellendorffii HOM05M003930 ORTHO05M004688 2.0e-45 185.3 130 60.8
EJB05_42953 Eragrostis curvula HOM05M003930 ORTHO05M004688 2.6e-45 184.9 116 66.4
Zm00001eb099190 Zea mays B73 HOM05M003930 ORTHO05M004688 5.7e-45 183.7 101 75.2
Zjn_sc00039.1.g04030.1.am.mk Zoysia japonica ssp. nagirizaki HOM05M003930 ORTHO05M004688 1.7e-44 182.2 120 65.8
Glyma.11G214900 Glycine max HOM05M003930 ORTHO05M004688 1.1e-43 179.5 135 64.4
Zm00007a00036146 Zea mays B104 HOM05M003930 ORTHO05M004688 1.1e-43 179.5 102 71.6
TRIDC5BG034720 Triticum dicoccoides HOM05M003930 ORTHO05M004688 1.1e-40 169.5 105 69.5
Sspon.02G0015080-3C Saccharum spontaneum HOM05M003930 ORTHO05M004688 4.4e-37 157.5 130 56.2
Sspon.02G0015080-1A Saccharum spontaneum HOM05M003930 ORTHO05M004688 1.3e-36 156.0 101 69.3
AET5Gv20498500 Aegilops tauschii HOM05M003930 ORTHO05M004688 1.1e-35 152.9 115 57.4
PRCOL_00006023 Prasinoderma coloniale HOM05M003930 ORTHO05M004688 3.1e-35 151.4 141 47.5
TraesCS5D03G0493700 Triticum aestivum HOM05M003930 ORTHO05M004688 4.1e-35 151.0 115 56.5
PH02Gene07722 Phyllostachys edulis HOM05M003930 ORTHO05M004688 7.2e-32 140.2 91 65.9
EJB05_42939 Eragrostis curvula HOM05M003930 ORTHO05M004688 4.9e-28 127.5 83 66.3
V3.Lp_chr5_0G12514 Lolium perenne HOM05M003930 ORTHO05M004688 6.3e-28 127.1 103 54.4
DDU049G0001 Dioscorea dumetorum HOM05M003930 ORTHO05M004688 1.7e-20 102.4 70 60.0
Zm00001eb099180 Zea mays B73 HOM05M003930 ORTHO05M004688 1.1e-19 99.8 80 56.2
Zm00007a00036145 Zea mays B104 HOM05M003930 ORTHO05M004688 2.0e-18 95.5 93 50.5
Asa4G01838 Allium sativum HOM05M003930 ORTHO05M004688 2.1e-15 85.5 57 66.7
Zm00007a00042411 Zea mays B104 HOM05M027164 ORTHO05M024529 5.6e-08 60.8 48 50.0
Asa0G04712 Allium sativum HOM05M003930 ORTHO05M004688 2.1e-07 58.9 40 60.0
CALSI_Maker00005341 Calamus simplicifolius HOM05M003930 ORTHO05M004688 1.4e-06 56.2 34 67.6
CALSI_Maker00030492 Calamus simplicifolius HOM05M003930 ORTHO05M004688 1.4e-06 56.2 34 67.6


User provided reference genes

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