Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g007260.1 Solanum lycopersicum HOM05M000524 ORTHO05M002120 1.4e-72 275.4 137 100.0
Solyc00g500052.1 Solanum lycopersicum HOM05M000524 ORTHO05M002120 2.9e-14 81.6 40 92.5
Solyc00g500135.1 Solanum lycopersicum HOM05M000524 ORTHO05M002120 2.9e-14 81.6 40 92.5
Solyc00g500205.1 Solanum lycopersicum HOM05M000524 ORTHO05M002120 2.9e-14 81.6 40 92.5
Solyc00g500290.1 Solanum lycopersicum HOM05M000524 ORTHO05M002120 2.9e-14 81.6 40 92.5
Solyc00g500319.1 Solanum lycopersicum HOM05M000524 ORTHO05M002120 2.9e-14 81.6 40 92.5
ATR0187G001 Amborella trichopoda HOM05M000524 ORTHO05M002120 1.1e-13 79.7 40 90.0
Potri.013G140260 Populus trichocarpa HOM05M000524 ORTHO05M002120 1.5e-13 79.3 40 87.5
Potri.019G028101 Populus trichocarpa HOM05M000524 ORTHO05M002120 1.5e-13 79.3 40 87.5
Asa0G01067 Allium sativum HOM05M000524 ORTHO05M003374 1.9e-13 79.0 37 97.3
Asa3G05070 Allium sativum HOM05M000524 ORTHO05M003374 1.9e-13 79.0 37 97.3
Asa6G02662 Allium sativum HOM05M000524 ORTHO05M002120 1.9e-13 79.0 37 97.3
Asa6G05956 Allium sativum HOM05M000524 ORTHO05M003374 1.9e-13 79.0 37 97.3
Aco021894 Ananas comosus HOM05M001860 ORTHO05M001856 1.9e-13 79.0 37 97.3
ATCG00170 Arabidopsis thaliana HOM05M000524 ORTHO05M002120 1.9e-13 79.0 37 97.3
Potri.003G067266 Populus trichocarpa HOM05M000524 ORTHO05M002120 1.6e-12 75.9 36 94.4
Zosma70g00220 Zostera marina HOM05M000524 ORTHO05M002120 2.1e-12 75.5 46 78.3
DDU125G0024 Dioscorea dumetorum HOM05M000524 ORTHO05M003374 4.0e-11 71.2 37 89.2
DDU643G0061 Dioscorea dumetorum HOM05M000524 ORTHO05M003374 4.0e-11 71.2 37 89.2
DDU643G0142 Dioscorea dumetorum HOM05M000524 ORTHO05M003374 4.0e-11 71.2 37 89.2
DDU747G0013 Dioscorea dumetorum HOM05M000524 ORTHO05M003374 4.0e-11 71.2 37 89.2
Solyc03g095380.1 Solanum lycopersicum HOM05M000524 ORTHO05M002120 4.0e-11 71.2 39 82.1
SEGI_23567 Sequoiadendron giganteum HOM05M000524 ORTHO05M002120 6.8e-11 70.5 36 86.1
SEGI_16756 Sequoiadendron giganteum HOM05M000524 ORTHO05M002120 2.0e-10 68.9 35 85.7
SEGI_21436 Sequoiadendron giganteum HOM05M000524 ORTHO05M014478 2.0e-10 68.9 35 85.7
SEGI_24812 Sequoiadendron giganteum HOM05M003342 ORTHO05M003806 2.0e-10 68.9 35 85.7
SEGI_31181 Sequoiadendron giganteum HOM05M003342 ORTHO05M003806 2.0e-10 68.9 35 85.7
SEGI_35543 Sequoiadendron giganteum HOM05M000524 ORTHO05M002120 2.0e-10 68.9 35 85.7
SEGI_36385 Sequoiadendron giganteum HOM05M000524 ORTHO05M002120 2.0e-10 68.9 35 85.7
SEGI_37297 Sequoiadendron giganteum HOM05M000524 ORTHO05M003374 2.0e-10 68.9 35 85.7
Zosma372g00010 Zostera marina HOM05M000524 ORTHO05M002120 2.6e-10 68.6 36 86.1
AET0Gv20065800 Aegilops tauschii HOM05M000524 ORTHO05M002120 3.4e-10 68.2 36 83.3
AET3Gv21179800 Aegilops tauschii HOM05M000524 ORTHO05M002120 3.4e-10 68.2 36 83.3
AET4Gv20044700 Aegilops tauschii HOM05M000524 ORTHO05M002120 3.4e-10 68.2 36 83.3
AET5Gv20017600 Aegilops tauschii HOM05M000524 ORTHO05M002120 3.4e-10 68.2 36 83.3
Bradi1g39195 Brachypodium distachyon HOM05M000524 ORTHO05M002120 3.4e-10 68.2 36 83.3
Bradi5g23822 Brachypodium distachyon HOM05M000524 ORTHO05M002120 3.4e-10 68.2 36 83.3
Ot_Un136_gn40101 Oropetium thomaeum HOM05M000524 ORTHO05M002120 3.4e-10 68.2 36 83.3
Ot_Un168_gn40528 Oropetium thomaeum HOM05M000524 ORTHO05M002120 3.4e-10 68.2 36 83.3
Ot_Un3_gn40878 Oropetium thomaeum HOM05M000524 ORTHO05M002120 3.4e-10 68.2 36 83.3
Pahal.2G129700 Panicum hallii HOM05M000524 ORTHO05M002120 3.4e-10 68.2 36 83.3
Sobic.003G169400 Sorghum bicolor HOM05M000524 ORTHO05M002120 3.4e-10 68.2 36 83.3
TraesCS7B03G0306100 Triticum aestivum HOM05M000524 ORTHO05M002120 3.4e-10 68.2 36 83.3
TRITD1Av1G209870 Triticum turgidum HOM05M000524 ORTHO05M002120 3.4e-10 68.2 36 83.3
Zm00001eb436830 Zea mays B73 HOM05M000524 ORTHO05M002120 4.4e-10 67.8 36 80.6
Zm00007a00006408 Zea mays B104 HOM05M000524 ORTHO05M002120 4.4e-10 67.8 36 80.6
Zm00007a00009824 Zea mays B104 HOM05M000524 ORTHO05M002120 4.4e-10 67.8 36 80.6
Zm00007a00016140 Zea mays B104 HOM05M000524 ORTHO05M002120 4.4e-10 67.8 36 80.6
Zm00007a00030995 Zea mays B104 HOM05M000524 ORTHO05M002120 4.4e-10 67.8 36 80.6
OsKitaake01g355500 Oryza sativa Kitaake HOM05M000524 ORTHO05M002120 1.3e-09 66.2 36 80.6
SEGI_20161 Sequoiadendron giganteum HOM05M000524 ORTHO05M002120 1.3e-09 66.2 35 80.0
Pahal.3G122900 Panicum hallii HOM05M000524 ORTHO05M002120 2.9e-09 65.1 36 77.8
Sspon.04G0029810-2C Saccharum spontaneum HOM05M000524 ORTHO05M002120 2.9e-09 65.1 36 83.3
GWHGASIY019922 Secale cereale HOM05M000524 ORTHO05M002120 4.9e-09 64.3 36 77.8
Solyc08g028940.1 Solanum lycopersicum HOM05M000524 ORTHO05M002120 6.4e-09 63.9 30 96.7
SMO086G0013 Selaginella moellendorffii HOM05M000524 ORTHO05M002120 2.0e-07 58.9 35 68.6
AET5Gv20138000 Aegilops tauschii HOM05M000524 ORTHO05M002120 8.6e-06 53.5 33 66.7
GWHGAORA007934 Cenchrus purpureus HOM05M000524 ORTHO05M002120 8.6e-06 53.5 28 82.1
Seita.J019100 Setaria italica HOM05M000524 ORTHO05M002120 8.6e-06 53.5 28 82.1

Aegilops tauschii (5 genes)
Allium sativum (4 genes)
Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Anthoceros agrestis (0 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (0 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (0 genes)
Cenchrus purpureus (1 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (0 genes)
Dioscorea dumetorum (4 genes)
Elaeis guineensis (0 genes)
Eragrostis curvula (0 genes)
Glycine max (0 genes)
Hordeum vulgare (0 genes)
Lolium perenne (0 genes)
Magnolia biondii (0 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (0 genes)
Musa acuminata (0 genes)
Oropetium thomaeum (3 genes)
Oryza alta (0 genes)
Oryza brachyantha (0 genes)
Oryza sativa Kitaake (1 genes)
Oryza sativa ssp. indica (0 genes)
Oryza sativa ssp. japonica (0 genes)
Panicum hallii (2 genes)
Phyllostachys edulis (0 genes)
Physcomitrium patens (0 genes)
Populus trichocarpa (3 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (1 genes)
Secale cereale (1 genes)
Selaginella moellendorffii (1 genes)
Sequoiadendron giganteum (9 genes)
Setaria italica (1 genes)
Setaria viridis (0 genes)
Solanum lycopersicum (8 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (0 genes)
Triticum aestivum (1 genes)
Triticum dicoccoides (0 genes)
Triticum turgidum (1 genes)
Vanilla planifolia (0 genes)
Zea mays B73 (1 genes)
Zea mays B104 (4 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (0 genes)

Program Settings