Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g006390.2 Solanum lycopersicum HOM05M004326 ORTHO05M004952 0.0e+00 1971.8 1319 100.0
Solyc05g055110.4 Solanum lycopersicum HOM05M004326 ORTHO05M004952 2.7e-104 384.0 640 46.2
Potri.010G244700 Populus trichocarpa HOM05M004326 ORTHO05M004952 1.6e-88 331.6 1389 33.7
Glyma.20G070600 Glycine max HOM05M004326 ORTHO05M004952 6.4e-82 309.7 794 37.3
Potri.008G014800 Populus trichocarpa HOM05M004326 ORTHO05M004952 1.2e-80 305.4 1405 32.4
Glyma.20G195200 Glycine max HOM05M004326 ORTHO05M004952 3.1e-76 290.8 1388 32.1
Glyma.10G194700 Glycine max HOM05M004326 ORTHO05M004952 1.9e-73 281.6 1413 32.3
Glyma.10G120200 Glycine max HOM05M004326 ORTHO05M004952 1.3e-71 275.4 1467 30.2
p5.00_sc00199_p0002 Elaeis guineensis HOM05M004326 ORTHO05M004952 1.6e-69 268.5 1431 30.6
MBI11_g01313_MAGBIO Magnolia biondii HOM05M004326 ORTHO05M004952 5.8e-67 260.0 1418 32.4
ATR0697G055 Amborella trichopoda HOM05M004326 ORTHO05M004952 3.2e-57 227.6 602 34.6
AT3G10650 Arabidopsis thaliana HOM05M004326 ORTHO05M004952 9.3e-57 226.1 1441 27.6
MBI05_g36784_MAGBIO Magnolia biondii HOM05M004326 ORTHO05M004952 1.5e-54 218.8 1079 29.6
CDE07G1072 Ceratophyllum demersum HOM05M004326 ORTHO05M004952 3.3e-54 217.6 1409 29.7
p5.00_sc00074_p0090 Elaeis guineensis HOM05M004326 ORTHO05M004952 1.4e-49 202.2 1427 31.9
Ma02_g10660 Musa acuminata HOM05M004326 ORTHO05M004952 1.7e-42 178.7 1427 31.5
Aco008752 Ananas comosus HOM05M004326 ORTHO05M004952 1.8e-39 168.7 1430 30.1
CDE04G3330 Ceratophyllum demersum HOM05M004326 ORTHO05M004952 1.2e-35 156.0 1438 26.4
Zosma05g33260 Zostera marina HOM05M004326 ORTHO05M004952 1.2e-35 156.0 1044 28.4
evm.TU.AsparagusV1_05.1653.V1.1 Asparagus officinalis HOM05M004326 ORTHO05M004952 2.9e-34 151.4 945 26.7
Spipo24G0031200 Spirodela polyrhiza HOM05M004326 ORTHO05M004952 5.0e-34 150.6 1403 30.1
Misin01G056200 Miscanthus sinensis HOM05M004326 ORTHO05M004952 5.5e-33 147.1 556 30.4
Zjn_sc00014.1.g06820.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M004326 ORTHO05M004952 3.6e-32 144.4 721 28.7
Ma03_g26850 Musa acuminata HOM05M004326 ORTHO05M004952 5.1e-31 140.6 1515 30.8
Ma07_g01360 Musa acuminata HOM05M004326 ORTHO05M004952 1.5e-30 139.0 921 26.8
p5.00_sc00746_p0001 Elaeis guineensis HOM05M004326 ORTHO05M004952 1.7e-29 135.6 1339 31.0
HPP92_026330 Vanilla planifolia HOM05M004326 ORTHO05M004952 2.8e-29 134.8 839 27.7
Asa3G03671 Allium sativum HOM05M028358 ORTHO05M004952 3.7e-29 134.4 806 27.4
Aco005139 Ananas comosus HOM05M004326 ORTHO05M004952 8.2e-29 133.3 1069 27.2
MBI01_g36593_MAGBIO Magnolia biondii HOM05M007954 ORTHO05M009700 1.1e-28 132.9 525 30.9
evm.TU.AsparagusV1_07.3401.V1.1 Asparagus officinalis HOM05M004326 ORTHO05M004952 1.4e-28 132.5 456 32.2
Bradi1g06310 Brachypodium distachyon HOM05M004326 ORTHO05M004952 3.1e-28 131.3 560 26.4
Asa1G04433 Allium sativum HOM05M028358 ORTHO05M004952 1.2e-27 129.4 783 25.5
AT5G20200 Arabidopsis thaliana HOM05M015148 ORTHO05M009700 6.5e-26 123.6 577 28.2
Potri.018G129900 Populus trichocarpa HOM05M015148 ORTHO05M009700 8.5e-26 123.2 625 27.4
Horvu_MOREX_5H01G608300 Hordeum vulgare HOM05M004326 ORTHO05M004952 1.1e-25 122.9 820 27.3
V3.Lp_chr4_0G4128 Lolium perenne HOM05M004326 ORTHO05M004952 1.1e-25 122.9 1490 29.3
Pahal.9G059100 Panicum hallii HOM05M004326 ORTHO05M004952 1.1e-25 122.9 1104 25.4
Seita.9G062800 Setaria italica HOM05M004326 ORTHO05M004952 3.2e-25 121.3 1038 25.4
Sobic.001G063700 Sorghum bicolor HOM05M004326 ORTHO05M004952 3.2e-25 121.3 963 27.1
Sevir.9G062100 Setaria viridis HOM05M004326 ORTHO05M004952 4.2e-25 120.9 1038 25.4
Zm00001eb060090 Zea mays B73 HOM05M004326 ORTHO05M004952 7.2e-25 120.2 1054 25.0
Zm00007a00016207 Zea mays B104 HOM05M004326 ORTHO05M004952 7.2e-25 120.2 1054 25.0
Dexi9B01G0005710 Digitaria exilis HOM05M004326 ORTHO05M004952 1.6e-24 119.0 1015 26.3
EJB05_04147 Eragrostis curvula HOM05M004326 ORTHO05M004952 2.1e-24 118.6 851 27.5
Solyc05g055130.1 Solanum lycopersicum HOM05M004326 ORTHO05M004952 2.7e-24 118.2 116 59.5
Ma04_g37900 Musa acuminata HOM05M004326 ORTHO05M004952 6.1e-24 117.1 1383 27.7
Ot_Chr4_g07806 Oropetium thomaeum HOM05M004326 ORTHO05M004952 2.3e-23 115.2 1019 26.4
GWHGASIY028642 Secale cereale HOM05M004326 ORTHO05M004952 3.3e-22 111.3 1099 25.8
Asa1G01406 Allium sativum HOM05M004326 ORTHO05M004952 5.7e-22 110.5 377 31.0
HPP92_018630 Vanilla planifolia HOM05M004326 ORTHO05M004952 7.4e-22 110.2 1374 29.0
TraesCS5A03G1009600 Triticum aestivum HOM05M004326 ORTHO05M004952 8.2e-21 106.7 1088 25.7
GWHGAORA019941 Cenchrus purpureus HOM05M004326 ORTHO05M004952 2.4e-20 105.1 1042 25.0
GWHGAORA050661 Cenchrus purpureus HOM05M004326 ORTHO05M004952 9.1e-20 103.2 995 24.9
HPP92_019542 Vanilla planifolia HOM05M004326 ORTHO05M004952 2.0e-19 102.1 447 28.6
Sevir.3G325800 Setaria viridis HOM05M008694 ORTHO05M011057 1.0e-18 99.8 808 25.0
TraesCS5B03G0281700 Triticum aestivum HOM05M008694 ORTHO05M011057 1.7e-18 99.0 813 26.3
TRITD5Bv1G055250 Triticum turgidum HOM05M008694 ORTHO05M011057 1.7e-18 99.0 813 26.3
Seita.3G315600 Setaria italica HOM05M008694 ORTHO05M011057 2.2e-18 98.6 808 25.0
Zm00001eb133060 Zea mays B73 HOM05M008694 ORTHO05M011057 2.2e-18 98.6 562 27.2
GWHGAZTO076916 Oryza alta HOM05M004326 ORTHO05M004952 6.5e-18 97.1 495 27.3
Zm00007a00044395 Zea mays B104 HOM05M008694 ORTHO05M011057 1.1e-17 96.3 547 27.4
PH02Gene06686 Phyllostachys edulis HOM05M004326 ORTHO05M004952 1.9e-17 95.5 583 24.7
Horvu_MOREX_5H01G179700 Hordeum vulgare HOM05M008694 ORTHO05M011057 4.2e-17 94.4 905 26.5
Mapoly0006s0069 Marchantia polymorpha HOM05M018657 ORTHO05M019060 5.5e-17 94.0 846 25.4
TraesCS5D03G0313100 Triticum aestivum HOM05M008694 ORTHO05M011057 7.2e-17 93.6 820 25.4
TraesCS5B03G1055700 Triticum aestivum HOM05M004326 ORTHO05M004952 1.2e-16 92.8 527 25.2
TRITD5Bv1G212010 Triticum turgidum HOM05M004326 ORTHO05M004952 1.2e-16 92.8 527 25.2
OB03G43660 Oryza brachyantha HOM05M004326 ORTHO05M004952 1.6e-16 92.4 494 26.7
PH02Gene45351 Phyllostachys edulis HOM05M008694 ORTHO05M011057 2.7e-16 91.7 841 26.8
Misin14G084900 Miscanthus sinensis HOM05M008694 ORTHO05M011057 1.0e-15 89.7 579 27.1
evm.TU.AsparagusV1_03.419.V1.1 Asparagus officinalis HOM05M004326 ORTHO05M004952 1.4e-15 89.4 550 26.2
Glyma.06G217700 Glycine max HOM05M015148 ORTHO05M009700 1.8e-15 89.0 342 28.7
TraesCS5A03G0324200 Triticum aestivum HOM05M008694 ORTHO05M011057 3.0e-15 88.2 805 24.7
TRITD5Av1G086340 Triticum turgidum HOM05M008694 ORTHO05M011057 3.0e-15 88.2 805 24.7
Sspon.01G0062050-1D Saccharum spontaneum HOM05M000049 ORTHO05M004952 6.8e-15 87.0 378 28.6
TRIDC5AG020300 Triticum dicoccoides HOM05M008694 ORTHO05M011057 6.8e-15 87.0 809 24.6
GWHGASIY025105 Secale cereale HOM05M008694 ORTHO05M011057 1.2e-14 86.3 803 24.7
Glyma.04G146900 Glycine max HOM05M015148 ORTHO05M009700 4.4e-14 84.3 738 25.1
Solyc07g008190.4 Solanum lycopersicum HOM05M015148 ORTHO05M009700 2.8e-13 81.6 520 27.3
CALSI_Maker00002060 Calamus simplicifolius HOM05M004326 ORTHO05M004952 3.7e-13 81.3 1170 25.3
p5.00_sc00406_p0013 Elaeis guineensis HOM05M007954 ORTHO05M009700 4.8e-13 80.9 470 28.1
TRITD5Av1G215620 Triticum turgidum HOM05M004326 ORTHO05M004952 6.3e-13 80.5 995 25.7
TraesCS5D03G0955300 Triticum aestivum HOM05M004326 ORTHO05M004952 1.1e-12 79.7 855 24.8
Asa1G01405 Allium sativum HOM05M004326 ORTHO05M004952 1.4e-12 79.3 170 36.5
Potri.008G015350 Populus trichocarpa HOM05M004326 ORTHO05M004952 4.1e-12 77.8 261 36.4
MisinT560700 Miscanthus sinensis HOM05M004326 ORTHO05M004952 7.0e-12 77.0 138 42.8
Pahal.3G419700 Panicum hallii HOM05M008694 ORTHO05M011057 7.0e-12 77.0 664 24.8
CALSI_Maker00014513 Calamus simplicifolius HOM05M004326 ORTHO05M004952 1.2e-11 76.3 317 29.0
GWHGAZTO014818 Oryza alta HOM05M008694 ORTHO05M011057 2.0e-11 75.5 1073 26.6
PH02Gene15192 Phyllostachys edulis HOM05M004326 ORTHO05M004952 1.3e-10 72.8 397 25.7
Potri.018G006200 Populus trichocarpa HOM05M005708 ORTHO05M006351 1.3e-10 72.8 256 32.8
Dexi9A01G0005990 Digitaria exilis HOM05M004326 ORTHO05M004952 3.8e-10 71.2 664 23.8
GWHGAZTO076915 Oryza alta HOM05M004326 ORTHO05M004952 4.2e-09 67.8 154 33.8
Bradi4g07760 Brachypodium distachyon HOM05M008694 ORTHO05M011057 7.2e-09 67.0 1055 26.9
CALSI_Maker00027865 Calamus simplicifolius HOM05M004326 ORTHO05M004952 1.2e-08 66.2 131 38.2
TRIDC5BG065740 Triticum dicoccoides HOM05M004326 ORTHO05M004952 1.6e-08 65.9 416 25.7
Sspon.02G0054400-1C Saccharum spontaneum HOM05M008694 ORTHO05M011057 2.7e-08 65.1 489 25.8
CALSI_Maker00039280 Calamus simplicifolius HOM05M004326 ORTHO05M004952 3.6e-08 64.7 291 29.2
Ot_Chr10_gn30185 Oropetium thomaeum HOM05M008694 ORTHO05M011057 3.6e-08 64.7 1043 23.4
CALSI_Maker00034269 Calamus simplicifolius HOM05M004326 ORTHO05M004952 3.0e-07 61.6 147 34.7
Glyma.06G075900 Glycine max HOM05M005708 ORTHO05M006351 4.0e-07 61.2 275 28.7
CALSI_Maker00024240 Calamus simplicifolius HOM05M004326 ORTHO05M004952 5.2e-07 60.8 239 31.0
V3.Lp_chr6_0G17758 Lolium perenne HOM05M008694 ORTHO05M011057 5.2e-07 60.8 370 27.3
GWHGAZTO027040 Oryza alta HOM05M004326 ORTHO05M004952 6.8e-07 60.5 1410 30.8
OsKitaake12g120600 Oryza sativa Kitaake HOM05M008694 ORTHO05M011057 2.6e-06 58.5 941 25.1
SEGI_30019 Sequoiadendron giganteum HOM05M004326 ORTHO05M004952 2.6e-06 58.5 818 25.1
AET5Gv20992700 Aegilops tauschii HOM05M004326 ORTHO05M004952 3.4e-06 58.2 802 24.2
Solyc08g006480.3 Solanum lycopersicum HOM05M005708 ORTHO05M006351 3.4e-06 58.2 252 27.4
Asa1G01407 Allium sativum HOM05M004326 ORTHO05M004952 4.4e-06 57.8 138 39.1
Asa3G03667 Allium sativum HOM05M028358 ORTHO05M004952 4.4e-06 57.8 536 22.4
Asa6G01566 Allium sativum HOM05M007954 ORTHO05M009700 5.7e-06 57.4 451 24.8
OsKitaake03g367800 Oryza sativa Kitaake HOM05M004326 ORTHO05M004952 5.7e-06 57.4 1298 32.7
Os03g0788300 Oryza sativa ssp. japonica HOM05M004326 ORTHO05M004952 5.7e-06 57.4 1298 32.7
TRIDC5BG018740 Triticum dicoccoides HOM05M008694 ORTHO05M011057 5.7e-06 57.4 613 25.4

Aegilops tauschii (1 genes)
Allium sativum (7 genes)
Amborella trichopoda (1 genes)
Ananas comosus (2 genes)
Anthoceros agrestis (0 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (3 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (6 genes)
Cenchrus purpureus (2 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (2 genes)
Dioscorea dumetorum (0 genes)
Elaeis guineensis (4 genes)
Eragrostis curvula (1 genes)
Glycine max (7 genes)
Hordeum vulgare (2 genes)
Lolium perenne (2 genes)
Magnolia biondii (3 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (4 genes)
Oropetium thomaeum (2 genes)
Oryza alta (4 genes)
Oryza brachyantha (1 genes)
Oryza sativa Kitaake (2 genes)
Oryza sativa ssp. indica (0 genes)
Oryza sativa ssp. japonica (1 genes)
Panicum hallii (2 genes)
Phyllostachys edulis (3 genes)
Physcomitrium patens (0 genes)
Populus trichocarpa (5 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (2 genes)
Secale cereale (2 genes)
Selaginella moellendorffii (0 genes)
Sequoiadendron giganteum (1 genes)
Setaria italica (2 genes)
Setaria viridis (2 genes)
Solanum lycopersicum (5 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (6 genes)
Triticum dicoccoides (3 genes)
Triticum turgidum (4 genes)
Vanilla planifolia (3 genes)
Zea mays B73 (2 genes)
Zea mays B104 (2 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

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