Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g006160.3 Solanum lycopersicum HOM05M000760 ORTHO05M000640 1.8e-76 288.5 154 100.0
Solyc11g006180.2 Solanum lycopersicum HOM05M000760 ORTHO05M000640 3.9e-31 137.9 220 47.7
Solyc05g055070.4 Solanum lycopersicum HOM05M000760 ORTHO05M000640 3.5e-24 114.8 205 42.9
Potri.013G044100 Populus trichocarpa HOM05M000760 ORTHO05M000640 4.3e-14 81.3 205 34.6
Glyma.20G221800 Glycine max HOM05M000760 ORTHO05M000640 8.2e-13 77.0 209 35.4
Glyma.10G167300 Glycine max HOM05M000760 ORTHO05M000640 1.1e-12 76.6 209 34.9
Glyma.20G202200 Glycine max HOM05M000760 ORTHO05M000640 1.1e-12 76.6 205 34.1
Potri.019G014300 Populus trichocarpa HOM05M000760 ORTHO05M000640 1.4e-12 76.3 206 34.5
Potri.010G074300 Populus trichocarpa HOM05M000760 ORTHO05M000640 1.7e-10 69.3 204 31.9
Glyma.03G251700 Glycine max HOM05M000760 ORTHO05M000640 4.9e-10 67.8 207 32.9
Glyma.19G249100 Glycine max HOM05M000760 ORTHO05M000640 8.4e-10 67.0 207 32.9
Glyma.20G087000 Glycine max HOM05M000760 ORTHO05M000640 1.4e-09 66.2 125 39.2
Solyc06g051610.1 Solanum lycopersicum HOM05M000760 ORTHO05M000640 1.9e-09 65.9 125 44.0
Solyc09g008720.3 Solanum lycopersicum HOM05M000448 ORTHO05M000347 3.2e-09 65.1 123 43.9
Solyc06g053710.3 Solanum lycopersicum HOM05M000760 ORTHO05M000640 7.1e-09 63.9 221 31.2
Potri.008G164400 Populus trichocarpa HOM05M000760 ORTHO05M000640 9.3e-09 63.5 205 32.2
Solyc09g082910.2 Solanum lycopersicum HOM05M000760 ORTHO05M000640 9.3e-09 63.5 122 41.0
Glyma.10G188500 Glycine max HOM05M000760 ORTHO05M000640 1.0e-07 60.1 184 31.5
AT3G04580 Arabidopsis thaliana HOM05M000760 ORTHO05M000640 1.8e-07 59.3 197 30.5
AT3G23150 Arabidopsis thaliana HOM05M000760 ORTHO05M000640 3.9e-07 58.2 198 29.8
Dexi1A01G0031770 Digitaria exilis HOM05M000760 ORTHO05M000640 5.1e-07 57.8 193 31.6
Dexi1B01G0030750 Digitaria exilis HOM05M000760 ORTHO05M000640 5.1e-07 57.8 193 31.6
GWHGAORA049019 Cenchrus purpureus HOM05M000760 ORTHO05M012546 6.7e-07 57.4 136 35.3
evm.TU.AsparagusV1_10.1483.V1.1 Asparagus officinalis HOM05M000760 ORTHO05M000640 8.7e-07 57.0 182 30.2
CALSI_Maker00014726 Calamus simplicifolius HOM05M000760 ORTHO05M000640 1.1e-06 56.6 95 37.9
MBI18_g20361_MAGBIO Magnolia biondii HOM05M000760 ORTHO05M000640 1.1e-06 56.6 205 31.2
Solyc06g036450.1 Solanum lycopersicum HOM05M000760 ORTHO05M000640 1.1e-06 56.6 90 48.9
Asa7G06525 Allium sativum HOM05M000760 ORTHO05M000640 1.5e-06 56.2 202 29.2
p5.00_sc00193_p0004 Elaeis guineensis HOM05M000760 ORTHO05M000640 1.5e-06 56.2 204 28.9
Spipo1G0021500 Spirodela polyrhiza HOM05M000760 ORTHO05M000640 1.5e-06 56.2 93 43.0
GWHGAORA061157 Cenchrus purpureus HOM05M000760 ORTHO05M000640 1.9e-06 55.8 193 30.6
Ma08_g12900 Musa acuminata HOM05M000760 ORTHO05M000640 1.9e-06 55.8 204 29.9
Seita.1G370200 Setaria italica HOM05M000760 ORTHO05M000640 1.9e-06 55.8 193 30.6
Sevir.1G376800 Setaria viridis HOM05M000760 ORTHO05M000640 1.9e-06 55.8 193 30.6
GWHGAORA025840 Cenchrus purpureus HOM05M000760 ORTHO05M000640 2.5e-06 55.5 193 30.6
Ma11_g02040 Musa acuminata HOM05M000760 ORTHO05M000640 2.5e-06 55.5 95 41.1
evm.TU.AsparagusV1_04.1826.V1.1 Asparagus officinalis HOM05M000760 ORTHO05M000640 3.3e-06 55.1 95 38.9
EJB05_19164 Eragrostis curvula HOM05M000760 ORTHO05M000640 7.4e-06 53.9 193 31.6
GWHGASIY012316 Secale cereale HOM05M000760 ORTHO05M000640 7.4e-06 53.9 180 28.9
Sobic.004G349175 Sorghum bicolor HOM05M000760 ORTHO05M000640 7.4e-06 53.9 194 30.9
Zjn_sc00007.1.g00600.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM05M000760 ORTHO05M000640 7.4e-06 53.9 209 29.7
CALSI_Maker00009475 Calamus simplicifolius HOM05M000760 ORTHO05M000640 9.7e-06 53.5 95 38.9
Zm00001eb191130 Zea mays B73 HOM05M000760 ORTHO05M000640 9.7e-06 53.5 196 28.1
Zm00007a00036066 Zea mays B104 HOM05M000760 ORTHO05M000640 9.7e-06 53.5 196 28.1


User provided reference genes

Program Settings