Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g045730.1 Solanum lycopersicum HOM05M003179 ORTHO05M003686 3.5e-62 240.7 125 100.0
Misin02G476000 Miscanthus sinensis HOM05M003179 ORTHO05M003686 3.3e-28 127.9 149 57.7
Seita.J007200 Setaria italica HOM05M003179 ORTHO05M003686 2.1e-27 125.2 149 56.4
Pahal.4G169200 Panicum hallii HOM05M003179 ORTHO05M003686 1.8e-26 122.1 149 55.7
TraesCS7B03G0139600 Triticum aestivum HOM05M003179 ORTHO05M003686 1.8e-26 122.1 149 56.4
TRITD7Bv1G019570 Triticum turgidum HOM05M003179 ORTHO05M003686 1.8e-26 122.1 149 56.4
TraesCS7D03G0662700 Triticum aestivum HOM05M003179 ORTHO05M003686 2.3e-26 121.7 149 55.7
Solyc00g021630.1 Solanum lycopersicum HOM05M003179 ORTHO05M003686 5.2e-26 120.6 131 61.8
Horvu_MOREX_Un01G025900 Hordeum vulgare HOM05M003179 ORTHO05M003686 1.2e-25 119.4 149 55.0
TraesCS2B03G0735600 Triticum aestivum HOM05M003179 ORTHO05M003686 1.2e-25 119.4 149 55.0
TraesCS6B03G1282800 Triticum aestivum HOM05M003179 ORTHO05M003686 1.2e-25 119.4 149 55.0
TRIDC4AG062700 Triticum dicoccoides HOM05M003179 ORTHO05M003686 1.2e-25 119.4 149 55.0
TRITD5Av1G239810 Triticum turgidum HOM05M003179 ORTHO05M003686 1.2e-25 119.4 149 55.0
TraesCS1B03G1229300 Triticum aestivum HOM05M003179 ORTHO05M003686 2.0e-25 118.6 149 55.0
TraesCS7A03G1279800 Triticum aestivum HOM05M003179 ORTHO05M003686 2.0e-25 118.6 149 54.4
TRITD1Bv1G221590 Triticum turgidum HOM05M003179 ORTHO05M003686 2.0e-25 118.6 149 55.0
OsR498G0022197200.01 Oryza sativa ssp. indica HOM05M003179 ORTHO05M003686 2.6e-25 118.2 149 54.4
TraesCS2B03G0734000 Triticum aestivum HOM05M003179 ORTHO05M003686 2.6e-25 118.2 149 55.0
TraesCS4B03G0650700 Triticum aestivum HOM05M003179 ORTHO05M003686 9.8e-25 116.3 149 54.4
TRITD4Bv1G144150 Triticum turgidum HOM05M003179 ORTHO05M003686 9.8e-25 116.3 149 54.4
TraesCS5B03G0971000 Triticum aestivum HOM05M003179 ORTHO05M003686 2.2e-24 115.2 149 53.7
V3.Lp_chr3_0G16978 Lolium perenne HOM05M003179 ORTHO05M003686 2.9e-24 114.8 149 53.7
TRITD3Bv1G018220 Triticum turgidum HOM05M003179 ORTHO05M003686 2.9e-24 114.8 149 54.4
TRITD7Bv1G228570 Triticum turgidum HOM05M003179 ORTHO05M003686 2.9e-24 114.8 149 53.7
ATMG00270 Arabidopsis thaliana HOM05M003179 ORTHO05M003686 3.7e-24 114.4 131 59.5
TraesCS7A03G0463000 Triticum aestivum HOM05M003179 ORTHO05M003686 8.3e-24 113.2 149 51.7
TRITD2Bv1G130050 Triticum turgidum HOM05M003179 ORTHO05M003686 8.3e-24 113.2 149 53.7
Asa4G06096 Allium sativum HOM05M003179 ORTHO05M003686 1.4e-23 112.5 142 56.3
Horvu_MOREX_5H01G231200 Hordeum vulgare HOM05M003179 ORTHO05M003686 1.9e-23 112.1 149 53.7
Glyma.08G301000 Glycine max HOM05M003179 ORTHO05M003686 3.2e-23 111.3 131 58.8
TraesCS3D03G0856100 Triticum aestivum HOM05M003179 ORTHO05M003686 3.2e-23 111.3 149 53.0
TRITD4Av1G111690 Triticum turgidum HOM05M003179 ORTHO05M003686 4.1e-23 110.9 149 53.0
TRIDC1AG016640 Triticum dicoccoides HOM05M003179 ORTHO05M003686 1.2e-22 109.4 132 57.6
Asa2G00416 Allium sativum HOM05M003179 ORTHO05M003686 3.5e-22 107.8 141 55.3
Asa4G01098 Allium sativum HOM05M003179 ORTHO05M003686 3.5e-22 107.8 141 55.3
AET7Gv20711000 Aegilops tauschii HOM05M003179 ORTHO05M003686 4.6e-22 107.5 131 57.3
TRIDC5AG060210 Triticum dicoccoides HOM05M003179 ORTHO05M003686 1.7e-21 105.5 131 55.7
AET0Gv20087100 Aegilops tauschii HOM05M003179 ORTHO05M003686 2.3e-21 105.1 131 56.5
AET0Gv20088100 Aegilops tauschii HOM05M003179 ORTHO05M003686 2.3e-21 105.1 131 56.5
AET0Gv20090800 Aegilops tauschii HOM05M003179 ORTHO05M003686 2.3e-21 105.1 131 56.5
AET4Gv20043800 Aegilops tauschii HOM05M003179 ORTHO05M003686 2.3e-21 105.1 131 56.5
AET4Gv20313300 Aegilops tauschii HOM05M003179 ORTHO05M003686 2.3e-21 105.1 131 56.5
AET4Gv20612900 Aegilops tauschii HOM05M003179 ORTHO05M003686 2.3e-21 105.1 131 56.5
AET7Gv20707600 Aegilops tauschii HOM05M003179 ORTHO05M003686 2.3e-21 105.1 131 56.5
TraesCS2D03G0567200 Triticum aestivum HOM05M003179 ORTHO05M003686 2.3e-21 105.1 148 50.7
TRIDC7AG015030 Triticum dicoccoides HOM05M003179 ORTHO05M003686 2.3e-21 105.1 131 56.5
Sobic.010G098800 Sorghum bicolor HOM05M003179 ORTHO05M003686 8.6e-21 103.2 105 61.9
TRIDC3AG058220 Triticum dicoccoides HOM05M003179 ORTHO05M003686 1.1e-20 102.8 131 55.7
TRITD6Bv1G180800 Triticum turgidum HOM05M003179 ORTHO05M003686 1.5e-20 102.4 130 55.4
TRIDC7AG024900 Triticum dicoccoides HOM05M003179 ORTHO05M003686 4.3e-20 100.9 131 53.4
TRIDC2BG041180 Triticum dicoccoides HOM05M003179 ORTHO05M003686 5.6e-20 100.5 131 55.0
TRIDC7BG072920 Triticum dicoccoides HOM05M003179 ORTHO05M003686 5.6e-20 100.5 131 55.0
TRITD3Av1G236480 Triticum turgidum HOM05M003179 ORTHO05M003686 5.6e-20 100.5 130 55.4
Asa5G01352 Allium sativum HOM05M003179 ORTHO05M003686 7.3e-20 100.1 142 52.8
mito3_g00140 Musa acuminata HOM05M003179 ORTHO05M003686 7.3e-20 100.1 131 55.7
AET6Gv20271300 Aegilops tauschii HOM05M003179 ORTHO05M003686 9.5e-20 99.8 131 55.7
Horvu_MOREX_5H01G245900 Hordeum vulgare HOM05M003179 ORTHO05M003686 9.5e-20 99.8 125 57.6
TRIDC2BG041140 Triticum dicoccoides HOM05M003179 ORTHO05M003686 9.5e-20 99.8 131 55.0
TRIDC5BG060160 Triticum dicoccoides HOM05M003179 ORTHO05M003686 1.6e-19 99.0 131 54.2
AET1Gv20500100 Aegilops tauschii HOM05M003179 ORTHO05M003686 3.6e-19 97.8 131 54.2
TraesCS1A03G0235600 Triticum aestivum HOM05M003179 ORTHO05M003686 3.6e-19 97.8 117 56.4
TRIDC4AG024760 Triticum dicoccoides HOM05M003179 ORTHO05M003686 8.1e-19 96.7 131 54.2
DDU690G0013 Dioscorea dumetorum HOM05M003179 ORTHO05M003686 1.4e-18 95.9 99 62.6
Zosma360g00110 Zostera marina HOM05M003179 ORTHO05M003686 6.8e-18 93.6 131 52.7
Zosma52g00100 Zostera marina HOM05M003179 ORTHO05M003686 6.8e-18 93.6 131 52.7
Zosma838g00090 Zostera marina HOM05M003179 ORTHO05M003686 6.8e-18 93.6 131 52.7
MBI05_g05356_MAGBIO Magnolia biondii HOM05M003179 ORTHO05M003686 3.4e-17 91.3 123 52.8
TraesCS7D03G0658200 Triticum aestivum HOM05M003179 ORTHO05M003686 1.3e-16 89.4 89 64.0
V3.Lp_chr6_0G20042 Lolium perenne HOM05M003179 ORTHO05M003686 3.8e-16 87.8 109 54.1
TRIDC3BG008640 Triticum dicoccoides HOM05M003179 ORTHO05M003686 9.2e-15 83.2 87 64.4
Pp3c12_12240 Physcomitrium patens HOM05M003179 ORTHO05M003686 3.0e-13 78.2 132 43.9
Ot_Un12_gn40073 Oropetium thomaeum HOM05M003179 ORTHO05M003686 6.6e-13 77.0 85 58.8
Ot_Un160_gn40287 Oropetium thomaeum HOM05M003179 ORTHO05M003686 6.6e-13 77.0 85 58.8
Ot_Un166_gn40514 Oropetium thomaeum HOM05M003179 ORTHO05M003686 6.6e-13 77.0 85 58.8
Sobic.K031300 Sorghum bicolor HOM05M003179 ORTHO05M003686 1.9e-12 75.5 74 60.8
Asa5G00158 Allium sativum HOM05M003179 ORTHO05M003686 9.6e-12 73.2 89 58.4
Sobic.009G095720 Sorghum bicolor HOM05M003179 ORTHO05M003686 2.1e-11 72.0 74 59.5
V3.Lp_chr1_0G18332 Lolium perenne HOM05M003179 ORTHO05M003686 3.6e-11 71.2 74 59.5
Zm00007a00014261 Zea mays B104 HOM05M003102 ORTHO05M003542 1.2e-09 66.2 86 53.5
CDE02G3221 Ceratophyllum demersum HOM05M003179 ORTHO05M003686 2.6e-09 65.1 87 51.7
Aco020228 Ananas comosus HOM05M003179 ORTHO05M003686 9.9e-09 63.2 144 41.0
Aco026165 Ananas comosus HOM05M003179 ORTHO05M003686 9.9e-09 63.2 144 41.0
Asa4G01086 Allium sativum HOM05M003179 ORTHO05M003686 4.9e-08 60.8 78 57.7
Horvu_MOREX_3H01G260700 Hordeum vulgare HOM05M003179 ORTHO05M003686 4.9e-08 60.8 69 56.5
Horvu_MOREX_Un01G060800 Hordeum vulgare HOM05M003179 ORTHO05M003686 4.9e-08 60.8 69 56.5
Horvu_MOREX_7H01G263300 Hordeum vulgare HOM05M003179 ORTHO05M003686 8.4e-08 60.1 70 55.7
Horvu_MOREX_5H01G420000 Hordeum vulgare HOM05M003179 ORTHO05M003686 1.1e-07 59.7 69 56.5
TRIDC6AG016360 Triticum dicoccoides HOM05M003179 ORTHO05M003686 1.1e-07 59.7 69 55.1
Solyc11g030930.3 Solanum lycopersicum HOM05M003179 ORTHO05M003686 1.4e-07 59.3 51 68.6
Misin01G249800 Miscanthus sinensis HOM05M003179 ORTHO05M003686 1.9e-07 58.9 69 55.1
Horvu_MOREX_1H01G059600 Hordeum vulgare HOM05M003179 ORTHO05M003686 1.6e-06 55.8 69 53.6
AET1Gv20400300 Aegilops tauschii HOM05M003179 ORTHO05M003686 2.7e-06 55.1 65 53.8
TRIDC3AG070560 Triticum dicoccoides HOM05M003179 ORTHO05M003686 6.0e-06 53.9 63 54.0


User provided reference genes

Program Settings