Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g098530.4 Solanum lycopersicum HOM05M006458 ORTHO05M008302 1.4e-276 954.9 491 100.0
Potri.007G124600 Populus trichocarpa HOM05M006458 ORTHO05M008302 3.4e-89 332.4 448 45.8
MBI08_g33651_MAGBIO Magnolia biondii HOM05M006458 ORTHO05M008302 5.0e-88 328.6 453 46.6
ATR0743G268 Amborella trichopoda HOM05M006458 ORTHO05M008302 2.2e-80 303.1 386 47.2
AT2G43235 Arabidopsis thaliana HOM05M006458 ORTHO05M008302 1.6e-78 297.0 454 41.2
Glyma.20G245900 Glycine max HOM05M006458 ORTHO05M008302 1.0e-77 294.3 458 42.1
CALSI_Maker00006369 Calamus simplicifolius HOM05M006458 ORTHO05M008302 3.9e-77 292.4 360 47.5
p5.00_sc00006_p0080 Elaeis guineensis HOM05M006458 ORTHO05M008302 8.2e-75 284.6 367 46.9
Ma09_g02220 Musa acuminata HOM05M006458 ORTHO05M008302 3.5e-73 279.3 356 46.3
Aco008065 Ananas comosus HOM05M006458 ORTHO05M008302 1.0e-69 267.7 361 44.9
CDE09G0849 Ceratophyllum demersum HOM05M006458 ORTHO05M008302 1.1e-66 257.7 281 52.3
Asa5G04614 Allium sativum HOM05M006458 ORTHO05M008302 1.8e-66 256.9 432 40.3
evm.TU.AsparagusV1_09.436.V1.1 Asparagus officinalis HOM05M000904 ORTHO05M001969 1.5e-63 247.3 289 47.4
Zosma04g07170 Zostera marina HOM05M006458 ORTHO05M008302 1.5e-63 247.3 372 43.3
DDU145G0047 Dioscorea dumetorum HOM05M006458 ORTHO05M008302 4.2e-63 245.7 390 39.7
DDU556G0014 Dioscorea dumetorum HOM05M006458 ORTHO05M008302 4.2e-63 245.7 390 39.7
HPP92_024424 Vanilla planifolia HOM05M006458 ORTHO05M008302 3.6e-62 242.7 404 38.9
V3.Lp_chr1_0G6340 Lolium perenne HOM05M006458 ORTHO05M008302 4.7e-62 242.3 452 37.6
Os05g0299200 Oryza sativa ssp. japonica HOM05M006458 ORTHO05M008302 2.3e-61 240.0 363 42.1
OsKitaake05g103900 Oryza sativa Kitaake HOM05M006458 ORTHO05M008302 3.0e-61 239.6 362 42.3
GWHGAORA037494 Cenchrus purpureus HOM05M006458 ORTHO05M008302 5.2e-61 238.8 370 40.0
GWHGAORA002485 Cenchrus purpureus HOM05M006458 ORTHO05M008302 1.5e-60 237.3 370 40.5
EJB05_00871 Eragrostis curvula HOM05M006458 ORTHO05M008302 5.7e-60 235.3 370 40.0
EJB05_34754 Eragrostis curvula HOM05M006458 ORTHO05M008302 7.5e-60 235.0 369 40.1
Zm00001eb350760 Zea mays B73 HOM05M006458 ORTHO05M008302 1.7e-59 233.8 374 39.8
Seita.3G294400 Setaria italica HOM05M006458 ORTHO05M008302 2.2e-59 233.4 458 36.5
Sevir.3G303900 Setaria viridis HOM05M006458 ORTHO05M008302 2.2e-59 233.4 458 36.5
GWHGAZTO033917 Oryza alta HOM05M006458 ORTHO05M008302 8.3e-59 231.5 372 41.7
Ot_Chr5_g14082 Oropetium thomaeum HOM05M006458 ORTHO05M008302 3.5e-57 226.1 421 38.7
Horvu_MOREX_1H01G109700 Hordeum vulgare HOM05M006458 ORTHO05M008302 5.9e-57 225.3 373 40.5
TraesCS1B03G0258800 Triticum aestivum HOM05M006458 ORTHO05M008302 2.2e-56 223.4 363 39.9
TRITD1Bv1G036580 Triticum turgidum HOM05M006458 ORTHO05M008302 2.2e-56 223.4 363 39.9
TRIDC1BG013720 Triticum dicoccoides HOM05M006458 ORTHO05M008302 2.9e-56 223.0 280 46.1
PH02Gene03096 Phyllostachys edulis HOM05M006458 ORTHO05M008302 3.8e-56 222.6 368 41.3
AET0Gv20030500 Aegilops tauschii HOM05M006458 ORTHO05M008302 1.1e-55 221.1 280 45.7
TraesCS1D03G0185400 Triticum aestivum HOM05M006458 ORTHO05M008302 1.9e-55 220.3 363 39.7
GWHGASIY000989 Secale cereale HOM05M006458 ORTHO05M008302 7.2e-55 218.4 363 39.7
TRIDC1AG011090 Triticum dicoccoides HOM05M006458 ORTHO05M008302 2.7e-54 216.5 361 39.6
TraesCS1A03G0192800 Triticum aestivum HOM05M006458 ORTHO05M008302 3.6e-54 216.1 360 39.7
Dexi2B01G0011290 Digitaria exilis HOM05M006458 ORTHO05M008302 8.0e-54 214.9 225 50.2
Pahal.3G376100 Panicum hallii HOM05M006458 ORTHO05M008302 4.0e-53 212.6 376 38.3
OB05G19600 Oryza brachyantha HOM05M006458 ORTHO05M008302 8.8e-53 211.5 196 56.1
GWHGASIY002627 Secale cereale HOM05M006458 ORTHO05M008302 4.4e-52 209.1 228 49.1
SEGI_17174 Sequoiadendron giganteum HOM05M006458 ORTHO05M008302 2.8e-51 206.5 284 41.9
TRITD1Av1G027940 Triticum turgidum HOM05M006458 ORTHO05M008302 1.2e-49 201.1 253 45.1
Spipo13G0020300 Spirodela polyrhiza HOM05M006458 ORTHO05M008302 2.9e-48 196.4 367 39.8
Dexi2A01G0012000 Digitaria exilis HOM05M006458 ORTHO05M008302 9.8e-44 181.4 181 51.9
Mapoly0004s0159 Marchantia polymorpha HOM05M006458 ORTHO05M008302 2.2e-43 180.3 357 33.6
AagrBONN_evm.TU.Sc2ySwM_344.5117 Anthoceros agrestis HOM05M006458 ORTHO05M008302 8.3e-43 178.3 353 34.8
SMO351G0235 Selaginella moellendorffii HOM05M006458 ORTHO05M008302 6.6e-40 168.7 281 39.9
Misin16G100700 Miscanthus sinensis HOM05M006458 ORTHO05M008302 1.5e-39 167.5 167 53.3
Sobic.009G094900 Sorghum bicolor HOM05M006458 ORTHO05M008302 2.5e-39 166.8 167 51.5
GWHGAZTO082894 Oryza alta HOM05M006458 ORTHO05M008302 4.3e-39 166.0 160 55.0
Bradi2g30480 Brachypodium distachyon HOM05M006458 ORTHO05M008302 2.6e-36 156.8 280 37.9
Pp3c12_3930 Physcomitrium patens HOM05M006458 ORTHO05M008302 7.5e-36 155.2 435 32.2
Zjn_sc00075.1.g00300.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M006458 ORTHO05M008302 9.2e-34 148.3 383 32.4
Misin16G100500 Miscanthus sinensis HOM05M006458 ORTHO05M008302 2.7e-33 146.7 135 55.6
Zm00007a00034043 Zea mays B104 HOM05M006458 ORTHO05M008302 5.0e-32 142.5 178 45.5
Sspon.07G0031780-1C Saccharum spontaneum HOM05M006458 ORTHO05M008302 7.3e-31 138.7 167 46.1
Pp3c9_3680 Physcomitrium patens HOM05M006458 ORTHO05M008302 8.3e-27 125.2 362 29.0
MCO03G554 Micromonas commoda HOM05M006458 ORTHO05M008302 4.9e-19 99.4 286 31.5
PRCOL_00005486 Prasinoderma coloniale HOM05M006458 ORTHO05M008302 2.1e-14 84.0 277 30.0
Sobic.009G094800 Sorghum bicolor HOM05M006458 ORTHO05M008302 1.5e-12 77.8 212 30.7
Zosma172g00010 Zostera marina HOM05M006458 ORTHO05M008302 2.6e-12 77.0 173 35.8
Misin16G100600 Miscanthus sinensis HOM05M006458 ORTHO05M008302 1.7e-11 74.3 206 29.1
AagrBONN_evm.TU.Sc2ySwM_368.1862 Anthoceros agrestis HOM05M004055 ORTHO05M004752 1.1e-10 71.6 72 56.9
Zm00007a00029513 Zea mays B104 HOM05M006458 ORTHO05M008302 1.1e-10 71.6 204 28.9
Cre01.g049900 Chlamydomonas reinhardtii HOM05M006458 ORTHO05M008302 7.1e-10 68.9 280 26.1


User provided reference genes

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