Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g092380.3 Solanum lycopersicum HOM05M002213 ORTHO05M003090 1.2e-283 978.4 486 100.0
Solyc09g092390.2 Solanum lycopersicum HOM05M002213 ORTHO05M003090 5.0e-282 973.0 486 99.0
Solyc12g098500.2 Solanum lycopersicum HOM05M002213 ORTHO05M003090 1.5e-270 934.9 486 94.4
Potri.017G059400 Populus trichocarpa HOM05M002213 ORTHO05M003090 2.6e-267 924.1 486 93.2
Asa0G05141 Allium sativum HOM05M002213 ORTHO05M003090 1.0e-266 922.2 486 93.2
Glyma.08G108800 Glycine max HOM05M002213 ORTHO05M003090 8.5e-266 919.1 486 93.0
Asa5G04211 Allium sativum HOM05M002213 ORTHO05M003090 1.6e-264 914.8 486 91.6
Asa5G06097 Allium sativum HOM05M002213 ORTHO05M003090 1.6e-264 914.8 486 91.6
Glyma.05G152000 Glycine max HOM05M002213 ORTHO05M003090 2.7e-264 914.1 486 92.6
MBI07_g24020_MAGBIO Magnolia biondii HOM05M002213 ORTHO05M003090 1.0e-263 912.1 486 91.8
Potri.001G320500 Populus trichocarpa HOM05M002213 ORTHO05M003090 1.4e-263 911.8 486 92.0
AT3G23810 Arabidopsis thaliana HOM05M002213 ORTHO05M003090 1.8e-263 911.4 486 92.0
AT4G13940 Arabidopsis thaliana HOM05M002213 ORTHO05M003090 8.8e-263 909.1 486 91.4
GWHGAORA035595 Cenchrus purpureus HOM05M002213 ORTHO05M003090 1.5e-262 908.3 486 91.2
Dexi3A01G0002910 Digitaria exilis HOM05M002213 ORTHO05M003090 2.6e-262 907.5 486 91.4
Dexi1A01G0023620 Digitaria exilis HOM05M002213 ORTHO05M003090 3.3e-262 907.1 486 91.2
p5.00_sc00716_p0004 Elaeis guineensis HOM05M002213 ORTHO05M003090 3.3e-262 907.1 486 91.2
GWHGAORA013460 Cenchrus purpureus HOM05M002213 ORTHO05M003090 4.4e-262 906.7 486 90.9
Seita.6G085800 Setaria italica HOM05M002213 ORTHO05M003090 5.7e-262 906.4 486 91.2
Sevir.6G085300 Setaria viridis HOM05M002213 ORTHO05M003090 5.7e-262 906.4 486 91.2
Dexi1B01G0022670 Digitaria exilis HOM05M002213 ORTHO05M003090 9.7e-262 905.6 486 90.9
Dexi3B01G0002960 Digitaria exilis HOM05M002213 ORTHO05M003090 9.7e-262 905.6 486 91.4
Pahal.1G353000 Panicum hallii HOM05M002213 ORTHO05M003090 9.7e-262 905.6 486 91.2
OsR498G1120079200.01 Oryza sativa ssp. indica HOM05M002213 ORTHO05M003090 1.3e-261 905.2 486 91.4
Bradi4g19457 Brachypodium distachyon HOM05M002213 ORTHO05M003090 1.7e-261 904.8 486 90.7
Misin09G116500 Miscanthus sinensis HOM05M002213 ORTHO05M003090 1.7e-261 904.8 486 91.2
Spipo13G0029700 Spirodela polyrhiza HOM05M002213 ORTHO05M003090 1.7e-261 904.8 486 91.6
Misin10G097300 Miscanthus sinensis HOM05M002213 ORTHO05M003090 2.8e-261 904.0 486 91.2
Pahal.6G014400 Panicum hallii HOM05M002213 ORTHO05M003090 2.8e-261 904.0 486 91.2
GWHGAORA060282 Cenchrus purpureus HOM05M002213 ORTHO05M003090 4.8e-261 903.3 486 90.7
EJB05_28055 Eragrostis curvula HOM05M002213 ORTHO05M003090 6.3e-261 902.9 486 90.7
GWHGAZTO063881 Oryza alta HOM05M002213 ORTHO05M003090 6.3e-261 902.9 486 90.9
Seita.1G277600 Setaria italica HOM05M002213 ORTHO05M003090 6.3e-261 902.9 486 90.5
Sevir.1G283100 Setaria viridis HOM05M002213 ORTHO05M003090 6.3e-261 902.9 486 90.5
Glyma.11G254700 Glycine max HOM05M002213 ORTHO05M003090 8.2e-261 902.5 486 90.9
Zm00001eb170040 Zea mays B73 HOM05M002213 ORTHO05M003090 8.2e-261 902.5 486 90.7
Zm00007a00028082 Zea mays B104 HOM05M002213 ORTHO05M003090 8.2e-261 902.5 486 90.7
Sspon.06G0013840-1A Saccharum spontaneum HOM05M002213 ORTHO05M003090 1.1e-260 902.1 486 90.9
Zjn_sc00061.1.g01070.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M002213 ORTHO05M003090 1.1e-260 902.1 486 90.5
EJB05_28052 Eragrostis curvula HOM05M002213 ORTHO05M003090 1.4e-260 901.7 486 90.5
GWHGAORA024857 Cenchrus purpureus HOM05M002213 ORTHO05M003090 1.8e-260 901.4 486 90.3
V3.Lp_chr6_0G754 Lolium perenne HOM05M002213 ORTHO05M003090 1.8e-260 901.4 486 90.5
Sspon.06G0013840-2B Saccharum spontaneum HOM05M002213 ORTHO05M003090 1.8e-260 901.4 486 90.7
DDU502G0018 Dioscorea dumetorum HOM05M002213 ORTHO05M003090 2.4e-260 901.0 486 89.9
DDU739G0238 Dioscorea dumetorum HOM05M002213 ORTHO05M003090 2.4e-260 901.0 486 89.9
GWHGAZTO011841 Oryza alta HOM05M002213 ORTHO05M003090 4.1e-260 900.2 486 90.7
PH02Gene07645 Phyllostachys edulis HOM05M002213 ORTHO05M003090 7.0e-260 899.4 486 90.3
PH02Gene43588 Phyllostachys edulis HOM05M002213 ORTHO05M003090 1.2e-259 898.7 486 90.1
Sobic.005G112800 Sorghum bicolor HOM05M002213 ORTHO05M003090 1.2e-259 898.7 486 90.5
CDE09G1358 Ceratophyllum demersum HOM05M002213 ORTHO05M003090 1.6e-259 898.3 486 90.7
V3.Lp_chr6_0G742 Lolium perenne HOM05M002213 ORTHO05M003090 1.6e-259 898.3 486 89.9
Ma08_g16380 Musa acuminata HOM05M002213 ORTHO05M003090 2.0e-259 897.9 486 89.9
Ma09_g01600 Musa acuminata HOM05M002213 ORTHO05M003090 3.5e-259 897.1 486 89.9
TraesCS2B03G1307900 Triticum aestivum HOM05M002213 ORTHO05M003090 3.5e-259 897.1 486 89.9
TRIDC2BG075250 Triticum dicoccoides HOM05M002213 ORTHO05M003090 3.5e-259 897.1 486 89.9
SEGI_34472 Sequoiadendron giganteum HOM05M002213 ORTHO05M003090 4.5e-259 896.7 486 90.1
GWHGASIY011354 Secale cereale HOM05M002213 ORTHO05M003090 5.9e-259 896.3 486 89.7
p5.00_sc00082_p0043 Elaeis guineensis HOM05M002213 ORTHO05M003090 7.7e-259 896.0 486 89.5
CALSI_Maker00037858 Calamus simplicifolius HOM05M002213 ORTHO05M003090 1.0e-258 895.6 486 90.1
AET2Gv21086800 Aegilops tauschii HOM05M002213 ORTHO05M003090 1.3e-258 895.2 486 89.7
Horvu_MOREX_2H01G682000 Hordeum vulgare HOM05M002213 ORTHO05M003090 1.3e-258 895.2 486 89.7
TraesCS2A03G1151900 Triticum aestivum HOM05M002213 ORTHO05M003090 1.3e-258 895.2 486 89.7
TraesCS2D03G1100800 Triticum aestivum HOM05M002213 ORTHO05M003090 1.3e-258 895.2 486 89.7
OB11G19990 Oryza brachyantha HOM05M002213 ORTHO05M003090 2.2e-258 894.4 486 90.7
TraesCS2B03G1299600 Triticum aestivum HOM05M002213 ORTHO05M003090 2.2e-258 894.4 486 89.7
Horvu_MOREX_2H01G677300 Hordeum vulgare HOM05M002213 ORTHO05M003090 3.8e-258 893.6 486 89.5
TraesCS2D03G1093700 Triticum aestivum HOM05M002213 ORTHO05M003090 3.8e-258 893.6 486 89.5
CDE02G4145 Ceratophyllum demersum HOM05M002213 ORTHO05M003090 5.0e-258 893.3 486 89.3
SMO337G0106 Selaginella moellendorffii HOM05M002213 ORTHO05M003090 5.0e-258 893.3 486 90.7
Ma06_g08140 Musa acuminata HOM05M002213 ORTHO05M003090 1.1e-257 892.1 486 89.5
TraesCS2A03G1143600 Triticum aestivum HOM05M002213 ORTHO05M003090 1.1e-257 892.1 486 89.3
TRIDC2AG069650 Triticum dicoccoides HOM05M002213 ORTHO05M003090 2.5e-257 891.0 482 89.8
GWHGASIY011392 Secale cereale HOM05M002213 ORTHO05M003090 3.2e-257 890.6 486 89.5
ATR0561G223 Amborella trichopoda HOM05M002213 ORTHO05M003090 6.1e-256 886.3 486 89.3
SEGI_27892 Sequoiadendron giganteum HOM05M002213 ORTHO05M003090 6.1e-256 886.3 486 88.7
Os11g0455500 Oryza sativa ssp. japonica HOM05M002213 ORTHO05M003090 1.0e-255 885.6 476 91.0
HPP92_024211 Vanilla planifolia HOM05M002213 ORTHO05M003090 2.3e-255 884.4 486 88.1
Aco022207 Ananas comosus HOM05M002213 ORTHO05M003090 3.0e-255 884.0 483 89.0
PH02Gene39099 Phyllostachys edulis HOM05M002213 ORTHO05M003090 4.0e-255 883.6 486 89.3
Aco016112 Ananas comosus HOM05M002213 ORTHO05M003090 5.7e-254 879.8 486 88.3
DDU049G0430 Dioscorea dumetorum HOM05M002213 ORTHO05M003090 5.7e-254 879.8 484 88.0
MBI11_g07404_MAGBIO Magnolia biondii HOM05M002213 ORTHO05M003090 5.7e-254 879.8 483 88.6
Zosma01g34060 Zostera marina HOM05M002213 ORTHO05M003090 2.8e-253 877.5 482 88.0
Zjn_sc00061.1.g01110.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM05M002213 ORTHO05M003090 1.4e-252 875.2 486 88.3
Mapoly0069s0006 Marchantia polymorpha HOM05M002213 ORTHO05M003090 1.7e-250 868.2 486 87.4
Pp3c19_14590 Physcomitrium patens HOM05M002213 ORTHO05M003090 7.2e-249 862.8 486 86.8
Pp3c19_13650 Physcomitrium patens HOM05M002213 ORTHO05M003090 4.7e-248 860.1 486 86.4
Pp3c19_13810 Physcomitrium patens HOM05M002213 ORTHO05M003090 4.7e-248 860.1 486 86.4
TRITD2Av1G269140 Triticum turgidum HOM05M002213 ORTHO05M003090 2.2e-245 851.3 486 86.6
TRIDC2BG074710 Triticum dicoccoides HOM05M002213 ORTHO05M003090 1.7e-237 825.1 446 89.7
TRIDC2AG069050 Triticum dicoccoides HOM05M002213 ORTHO05M003090 8.3e-237 822.8 446 89.2
CBR_g6529 Chara braunii HOM05M002213 ORTHO05M003090 5.6e-233 810.1 485 80.2
CBR_g32317 Chara braunii HOM05M002213 ORTHO05M003090 2.8e-232 807.7 485 80.6
HPP92_008212 Vanilla planifolia HOM05M002213 ORTHO05M003090 6.1e-232 806.6 487 84.0
Cre03.g204250 Chlamydomonas reinhardtii HOM05M002213 ORTHO05M003090 3.1e-231 804.3 486 80.0
CBR_g48580 Chara braunii HOM05M002213 ORTHO05M003090 1.5e-230 802.0 486 80.0
Asa4G00036 Allium sativum HOM05M002213 ORTHO05M003090 3.7e-229 797.3 486 83.3
Sspon.06G0013840-4D Saccharum spontaneum HOM05M002213 ORTHO05M003090 1.9e-228 795.0 424 91.3
CALSI_Maker00046457 Calamus simplicifolius HOM05M002213 ORTHO05M003090 8.6e-226 786.2 424 90.6
TRITD2Bv1G231510 Triticum turgidum HOM05M002213 ORTHO05M003090 4.3e-225 783.9 486 81.5
CDE06G0917 Ceratophyllum demersum HOM05M002213 ORTHO05M003090 7.3e-225 783.1 486 81.7
CALSI_Maker00017828 Calamus simplicifolius HOM05M002213 ORTHO05M003090 9.5e-225 782.7 424 89.9
Sspon.06G0013840-3C Saccharum spontaneum HOM05M002213 ORTHO05M003090 1.2e-224 782.3 486 81.5
TRITD2Av1G267810 Triticum turgidum HOM05M002213 ORTHO05M003090 4.7e-224 780.4 486 80.9
OsKitaake11g125600 Oryza sativa Kitaake HOM05M002213 ORTHO05M003090 1.2e-222 775.8 417 91.4
MCO10G068 Micromonas commoda HOM05M002213 ORTHO05M003090 1.9e-217 758.4 485 77.3
CBR_g11063 Chara braunii HOM05M002213 ORTHO05M003090 1.3e-213 745.7 485 74.6
GWHGAORA060289 Cenchrus purpureus HOM05M002213 ORTHO05M003090 7.1e-212 740.0 486 78.2
PRCOL_00006293 Prasinoderma coloniale HOM05M002213 ORTHO05M003090 3.0e-210 734.6 485 73.8
AagrBONN_evm.TU.Sc2ySwM_362.2860 Anthoceros agrestis HOM05M002213 ORTHO05M003090 3.3e-209 731.1 418 84.4
SEGI_02067 Sequoiadendron giganteum HOM05M002213 ORTHO05M003090 7.9e-195 683.3 398 83.7
Pp3c19_13710 Physcomitrium patens HOM05M002213 ORTHO05M003090 1.7e-181 639.0 367 85.8
SEGI_12597 Sequoiadendron giganteum HOM05M002213 ORTHO05M003090 3.3e-177 624.8 740 48.8
evm.TU.AsparagusV1_09.1215.V1.1 Asparagus officinalis HOM05M002213 ORTHO05M003090 1.5e-169 599.4 324 89.8
evm.TU.AsparagusV1_02.1554.V1.1 Asparagus officinalis HOM05M002213 ORTHO05M003090 6.5e-165 583.9 324 88.6
Spipo9G0067800 Spirodela polyrhiza HOM05M002213 ORTHO05M003090 2.2e-157 558.9 485 62.5
HPP92_003547 Vanilla planifolia HOM05M002213 ORTHO05M003090 4.7e-155 551.2 299 89.0
CDE02G1295 Ceratophyllum demersum HOM05M002213 ORTHO05M015079 7.5e-145 517.3 286 89.5
CALSI_Maker00018783 Calamus simplicifolius HOM05M002213 ORTHO05M003090 4.0e-130 468.4 250 90.8
CALSI_Maker00019248 Calamus simplicifolius HOM05M002213 ORTHO05M003090 4.0e-130 468.4 250 90.8
Zm00001eb090450 Zea mays B73 HOM05M002213 ORTHO05M003090 1.6e-118 429.9 234 89.3
Zm00007a00009417 Zea mays B104 HOM05M002213 ORTHO05M003090 1.6e-118 429.9 234 89.3
AET2Gv21079400 Aegilops tauschii HOM05M002213 ORTHO05M015079 2.0e-118 429.5 260 81.9
CALSI_Maker00019237 Calamus simplicifolius HOM05M002213 ORTHO05M015079 2.0e-118 429.5 237 88.2
GWHGAORA035617 Cenchrus purpureus HOM05M002213 ORTHO05M003090 4.6e-110 401.7 228 87.3
TRITD2Bv1G232570 Triticum turgidum HOM05M002213 ORTHO05M015079 1.1e-108 397.1 227 85.9
GWHGAORA035616 Cenchrus purpureus HOM05M002213 ORTHO05M015079 6.6e-101 371.3 208 87.5
CALSI_Maker00049864 Calamus simplicifolius HOM05M002213 ORTHO05M003090 2.8e-99 365.9 203 87.7
CDE02G3350 Ceratophyllum demersum HOM05M002213 ORTHO05M003090 3.2e-95 352.4 184 91.3
CALSI_Maker00006963 Calamus simplicifolius HOM05M002213 ORTHO05M023875 9.2e-95 350.9 299 62.9
CALSI_Maker00006976 Calamus simplicifolius HOM05M002213 ORTHO05M003090 1.5e-92 343.6 265 69.8
CALSI_Maker00047085 Calamus simplicifolius HOM05M000399 ORTHO05M000306 3.1e-90 335.9 250 71.6
Pp3c19_14520 Physcomitrium patens HOM05M002213 ORTHO05M003090 8.9e-90 334.3 184 87.5
Solyc05g032820.3 Solanum lycopersicum HOM05M002213 ORTHO05M003090 9.9e-89 330.9 221 75.6
CALSI_Maker00018769 Calamus simplicifolius HOM05M002213 ORTHO05M015079 6.0e-86 321.6 175 88.6
Asa6G00186 Allium sativum HOM05M002213 ORTHO05M003090 3.8e-80 302.4 265 62.3
CALSI_Maker00003013 Calamus simplicifolius HOM05M002213 ORTHO05M003090 5.6e-68 261.9 166 80.1
CALSI_Maker00049951 Calamus simplicifolius HOM05M002213 ORTHO05M003090 3.2e-55 219.5 116 87.9
CALSI_Maker00007643 Calamus simplicifolius HOM05M002213 ORTHO05M003090 1.6e-54 217.2 166 66.3
MBI06_g27725_MAGBIO Magnolia biondii HOM05M002213 ORTHO05M003090 4.2e-47 192.6 115 85.2
MBI02_g44627_MAGBIO Magnolia biondii HOM05M002213 ORTHO05M003090 3.9e-45 186.0 115 81.7
PH02Gene49831 Phyllostachys edulis HOM05M002213 ORTHO05M015079 1.1e-44 184.5 151 60.9
p5.00_sc00866_p0005 Elaeis guineensis HOM05M002213 ORTHO05M015079 2.6e-44 183.3 184 54.3
CDE03G0470 Ceratophyllum demersum HOM05M002213 ORTHO05M023875 1.5e-41 174.1 238 46.2
CDE12G0566 Ceratophyllum demersum HOM05M002213 ORTHO05M015079 4.2e-39 166.0 103 75.7
Asa6G06295 Allium sativum HOM05M002213 ORTHO05M003090 1.3e-35 154.5 129 62.8
CALSI_Maker00049904 Calamus simplicifolius HOM05M002213 ORTHO05M023875 7.7e-33 145.2 233 39.9
SEGI_27404 Sequoiadendron giganteum HOM05M002213 ORTHO05M021130 6.7e-29 132.1 88 73.9
CALSI_Maker00006936 Calamus simplicifolius HOM05M002213 ORTHO05M021130 3.1e-26 123.2 77 77.9
CALSI_Maker00007661 Calamus simplicifolius HOM05M002213 ORTHO05M021130 4.1e-26 122.9 77 77.9
PH02Gene44984 Phyllostachys edulis HOM05M002213 ORTHO05M002637 5.5e-23 112.5 75 76.0
MBI08_g29407_MAGBIO Magnolia biondii HOM05M002213 ORTHO05M007638 4.1e-18 96.3 49 87.8
Seita.6G063700 Setaria italica HOM05M002213 ORTHO05M000040 4.5e-17 92.8 55 83.6
Asa2G00430 Allium sativum HOM05M002213 ORTHO05M003090 6.5e-16 89.0 49 81.6
CALSI_Maker00018795 Calamus simplicifolius HOM05M002213 ORTHO05M082363 6.5e-16 89.0 51 84.3
Pahal.8G229600 Panicum hallii HOM05M002213 ORTHO05M204532 1.1e-15 88.2 57 80.7
SEGI_07239 Sequoiadendron giganteum HOM05M002213 ORTHO05M001127 1.9e-15 87.4 54 68.5
PH02Gene18454 Phyllostachys edulis HOM05M002213 ORTHO05M021130 4.7e-14 82.8 56 71.4
SEGI_05487 Sequoiadendron giganteum HOM05M000125 ORTHO05M000091 6.1e-14 82.4 73 58.9
PH02Gene02972 Phyllostachys edulis HOM05M002213 ORTHO05M209568 3.0e-13 80.1 237 30.4
SEGI_17057 Sequoiadendron giganteum HOM05M002213 ORTHO05M014925 5.2e-13 79.3 46 80.4
Zjn_sc00030.1.g01740.1.am.mk Zoysia japonica ssp. nagirizaki HOM05M002213 ORTHO05M292125 6.8e-13 79.0 61 72.1
PH02Gene24140 Phyllostachys edulis HOM05M002213 ORTHO05M210602 2.8e-11 73.6 47 74.5
CDE02G0046 Ceratophyllum demersum HOM05M002213 ORTHO05M085134 9.2e-10 68.6 44 75.0
PH02Gene09553 Phyllostachys edulis HOM05M002213 ORTHO05M002637 1.6e-09 67.8 45 75.6

Aegilops tauschii (2 genes)
Allium sativum (7 genes)
Amborella trichopoda (1 genes)
Ananas comosus (2 genes)
Anthoceros agrestis (1 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (18 genes)
Cenchrus purpureus (7 genes)
Ceratophyllum demersum (8 genes)
Chara braunii (4 genes)
Chlamydomonas reinhardtii (1 genes)
Digitaria exilis (4 genes)
Dioscorea dumetorum (3 genes)
Elaeis guineensis (3 genes)
Eragrostis curvula (2 genes)
Glycine max (3 genes)
Hordeum vulgare (2 genes)
Lolium perenne (2 genes)
Magnolia biondii (5 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (3 genes)
Oropetium thomaeum (0 genes)
Oryza alta (2 genes)
Oryza brachyantha (1 genes)
Oryza sativa Kitaake (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Panicum hallii (3 genes)
Phyllostachys edulis (9 genes)
Physcomitrium patens (5 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (1 genes)
Saccharum spontaneum (4 genes)
Secale cereale (2 genes)
Selaginella moellendorffii (1 genes)
Sequoiadendron giganteum (8 genes)
Setaria italica (3 genes)
Setaria viridis (2 genes)
Solanum lycopersicum (4 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (6 genes)
Triticum dicoccoides (4 genes)
Triticum turgidum (4 genes)
Vanilla planifolia (3 genes)
Zea mays B73 (2 genes)
Zea mays B104 (2 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (3 genes)

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