Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g074990.4 Solanum lycopersicum HOM05M006243 ORTHO05M008134 0.0e+00 1402.1 711 100.0
Potri.014G130800 Populus trichocarpa HOM05M006243 ORTHO05M008134 5.4e-176 621.3 718 51.7
Glyma.02G155200 Glycine max HOM05M006243 ORTHO05M008134 2.0e-170 602.8 743 49.3
p5.00_sc00025_p0013 Elaeis guineensis HOM05M006243 ORTHO05M008134 6.0e-159 564.7 725 46.6
Aco000661 Ananas comosus HOM05M006243 ORTHO05M008134 1.7e-158 563.1 725 47.0
evm.TU.AsparagusV1_02.2118.V1.1 Asparagus officinalis HOM05M006243 ORTHO05M008134 7.3e-157 557.8 707 47.9
Ma06_g21630 Musa acuminata HOM05M006243 ORTHO05M008134 1.4e-152 543.5 711 47.0
ATR0796G058 Amborella trichopoda HOM05M006243 ORTHO05M008134 3.3e-149 532.3 770 43.8
DDU479G0226 Dioscorea dumetorum HOM05M006243 ORTHO05M008134 1.4e-147 526.9 729 45.1
PH02Gene04735 Phyllostachys edulis HOM05M006243 ORTHO05M008134 5.4e-144 515.0 709 43.2
Zosma06g14190 Zostera marina HOM05M006243 ORTHO05M008134 6.0e-143 511.5 733 43.7
Bradi3g47472 Brachypodium distachyon HOM05M006243 ORTHO05M008134 1.1e-141 507.3 731 42.7
Sspon.04G0009380-2B Saccharum spontaneum HOM05M006243 ORTHO05M008134 1.6e-140 503.4 746 41.0
Sspon.04G0009380-1A Saccharum spontaneum HOM05M006243 ORTHO05M008134 1.4e-139 500.4 717 42.3
OsKitaake02g228900 Oryza sativa Kitaake HOM05M006243 ORTHO05M008134 2.0e-138 496.5 724 41.3
OsR498G0204218400.01 Oryza sativa ssp. indica HOM05M006243 ORTHO05M008134 2.0e-138 496.5 724 41.3
Os02g0592300 Oryza sativa ssp. japonica HOM05M006243 ORTHO05M008134 2.0e-138 496.5 724 41.3
TRITD6Av1G124350 Triticum turgidum HOM05M006243 ORTHO05M008134 2.6e-138 496.1 718 42.1
Misin08G184600 Miscanthus sinensis HOM05M006243 ORTHO05M008134 3.4e-138 495.7 715 41.7
TRITD6Bv1G119700 Triticum turgidum HOM05M006243 ORTHO05M008134 4.4e-138 495.4 724 42.0
GWHGAZTO019292 Oryza alta HOM05M006243 ORTHO05M008134 2.2e-137 493.0 731 40.8
OB02G29930 Oryza brachyantha HOM05M006243 ORTHO05M008134 2.2e-137 493.0 714 42.0
Sobic.004G199200 Sorghum bicolor HOM05M006243 ORTHO05M008134 3.8e-137 492.3 712 41.7
EJB05_21027 Eragrostis curvula HOM05M006243 ORTHO05M008134 6.4e-137 491.5 788 39.0
GWHGAZTO070907 Oryza alta HOM05M006243 ORTHO05M008134 1.1e-136 490.7 716 41.5
HPP92_011379 Vanilla planifolia HOM05M006243 ORTHO05M008134 1.9e-136 490.0 735 43.5
AET6Gv20552700 Aegilops tauschii HOM05M006243 ORTHO05M008134 3.2e-136 489.2 763 40.8
GWHGASIY031982 Secale cereale HOM05M006243 ORTHO05M008134 3.2e-136 489.2 713 41.2
TraesCS6A03G0559000 Triticum aestivum HOM05M006243 ORTHO05M008134 4.2e-136 488.8 767 40.9
Horvu_MOREX_6H01G312200 Hordeum vulgare HOM05M006243 ORTHO05M008134 1.6e-135 486.9 734 40.6
TRIDC6BG038340 Triticum dicoccoides HOM05M006243 ORTHO05M008134 1.0e-134 484.2 773 40.0
EJB05_21040 Eragrostis curvula HOM05M006243 ORTHO05M008134 1.7e-134 483.4 789 38.8
Pahal.1G288200 Panicum hallii HOM05M006243 ORTHO05M008134 1.9e-133 479.9 788 39.5
Zm00001eb183500 Zea mays B73 HOM05M006243 ORTHO05M008134 5.6e-133 478.4 782 39.8
Sevir.1G219200 Setaria viridis HOM05M006243 ORTHO05M008134 1.3e-132 477.2 790 39.6
GWHGAORA024202 Cenchrus purpureus HOM05M006243 ORTHO05M008134 8.1e-132 474.6 795 38.7
Ot_Chr1_g02620 Oropetium thomaeum HOM05M006243 ORTHO05M008134 3.1e-131 472.6 753 40.2
Dexi1B01G0017670 Digitaria exilis HOM05M006243 ORTHO05M008134 5.3e-131 471.9 796 38.7
Glyma.10G019200 Glycine max HOM05M006243 ORTHO05M008134 1.1e-128 464.2 651 46.4
GWHGAORA059655 Cenchrus purpureus HOM05M006243 ORTHO05M008134 1.9e-128 463.4 791 38.4
Spipo6G0046500 Spirodela polyrhiza HOM05M006243 ORTHO05M008134 8.4e-113 411.4 699 38.5
Pp3c8_22650 Physcomitrium patens HOM05M006243 ORTHO05M008134 8.7e-110 401.4 725 38.6
Asa6G03607 Allium sativum HOM05M006243 ORTHO05M008134 1.5e-106 390.6 607 41.2
AT4G02460 Arabidopsis thaliana HOM05M006243 ORTHO05M008134 4.5e-106 389.0 582 43.1
Mapoly0103s0058 Marchantia polymorpha HOM05M006243 ORTHO05M008134 3.8e-105 386.0 833 34.8
TraesCS6D03G0474100 Triticum aestivum HOM05M006243 ORTHO05M008134 2.5e-101 373.2 763 35.5
Misin07G389400 Miscanthus sinensis HOM05M006243 ORTHO05M008134 1.2e-98 364.4 825 33.8
Seita.1G215500 Setaria italica HOM05M006243 ORTHO05M008134 2.4e-91 340.1 718 33.7
Zm00007a00031658 Zea mays B104 HOM05M006243 ORTHO05M008134 9.4e-88 328.2 296 57.8
Asa6G04127 Allium sativum HOM05M006243 ORTHO05M008134 4.7e-87 325.9 393 47.3
TraesCS6B03G0683800 Triticum aestivum HOM05M006243 ORTHO05M008134 5.3e-83 312.4 638 36.1
SMO116G0380 Selaginella moellendorffii HOM05M006243 ORTHO05M008134 2.0e-82 310.5 676 33.6
AagrBONN_evm.TU.Sc2ySwM_117.2165 Anthoceros agrestis HOM05M006243 ORTHO05M008134 2.6e-74 283.5 636 33.8
CBR_g46895 Chara braunii HOM05M006243 ORTHO05M008134 4.4e-69 266.2 281 49.5
CALSI_Maker00029797 Calamus simplicifolius HOM05M006243 ORTHO05M008134 1.1e-67 261.5 196 65.3
MCO14G224 Micromonas commoda HOM05M006243 ORTHO05M008134 4.5e-66 256.1 699 31.6
TRIDC6AG031240 Triticum dicoccoides HOM05M006243 ORTHO05M008134 1.2e-61 241.5 591 33.5
PRCOL_00003998 Prasinoderma coloniale HOM05M006243 ORTHO05M008134 3.8e-57 226.5 687 27.5
CDE02G4041 Ceratophyllum demersum HOM05M006243 ORTHO05M008134 1.4e-54 218.0 512 32.8
Asa6G04128 Allium sativum HOM05M006243 ORTHO05M008134 1.0e-46 191.8 132 63.6
Zm00007a00031660 Zea mays B104 HOM05M006243 ORTHO05M008134 2.2e-44 184.1 302 37.4
SEGI_05920 Sequoiadendron giganteum HOM05M006243 ORTHO05M008134 1.1e-40 171.8 292 37.3
SEGI_25927 Sequoiadendron giganteum HOM05M006243 ORTHO05M008134 3.3e-40 170.2 565 29.4
Cre04.g227000 Chlamydomonas reinhardtii HOM05M006243 ORTHO05M008134 6.8e-30 136.0 355 29.6
Sspon.04G0009380-3D Saccharum spontaneum HOM05M006243 ORTHO05M008134 1.2e-26 125.2 115 55.7
Zjn_sc00037.1.g02810.1.sm.mk Zoysia japonica ssp. nagirizaki HOM05M006243 ORTHO05M008134 7.8e-26 122.5 293 33.8
SEGI_14206 Sequoiadendron giganteum HOM05M006243 ORTHO05M008134 1.6e-18 98.2 110 48.2
Asa6G03608 Allium sativum HOM05M006243 ORTHO05M008134 1.9e-16 91.3 54 72.2
Mapoly0006s0222 Marchantia polymorpha HOM05M004910 ORTHO05M006184 7.3e-16 89.4 229 27.9
AagrBONN_evm.TU.Sc2ySwM_228.256 Anthoceros agrestis HOM05M004850 ORTHO05M005722 2.0e-13 81.3 241 25.3
evm.TU.AsparagusV1_07.2330.V1.1 Asparagus officinalis HOM05M004910 ORTHO05M006184 3.8e-12 77.0 244 26.2
Glyma.01G158400 Glycine max HOM05M004910 ORTHO05M006184 3.8e-12 77.0 221 27.6
Solyc02g082660.3 Solanum lycopersicum HOM05M004910 ORTHO05M006184 8.4e-12 75.9 221 27.6
PRCOL_00002079 Prasinoderma coloniale HOM05M004910 ORTHO05M006184 4.2e-11 73.6 191 28.8
ATR0807G175 Amborella trichopoda HOM05M004910 ORTHO05M006184 7.1e-11 72.8 230 28.7
AT4G35520 Arabidopsis thaliana HOM05M004910 ORTHO05M006184 6.0e-10 69.7 357 23.8
OsKitaake09g190800 Oryza sativa Kitaake HOM05M004910 ORTHO05M006184 1.0e-09 68.9 226 25.2
Os09g0551900 Oryza sativa ssp. japonica HOM05M004910 ORTHO05M006184 1.0e-09 68.9 226 25.2
Pp3c13_10410 Physcomitrium patens HOM05M004910 ORTHO05M006184 1.0e-09 68.9 229 25.3
Aco018369 Ananas comosus HOM05M004910 ORTHO05M006184 1.3e-09 68.6 229 27.5
GWHGASIY027853 Secale cereale HOM05M004910 ORTHO05M006184 1.3e-09 68.6 223 25.1
TraesCS5A03G0848900 Triticum aestivum HOM05M004910 ORTHO05M006184 1.3e-09 68.6 225 25.3
HPP92_020507 Vanilla planifolia HOM05M004910 ORTHO05M006184 1.3e-09 68.6 228 25.9
p5.00_sc00014_p0202 Elaeis guineensis HOM05M004910 ORTHO05M006184 1.7e-09 68.2 224 25.0
TraesCS5D03G0811200 Triticum aestivum HOM05M004910 ORTHO05M006184 2.3e-09 67.8 223 25.1
TRIDC5BG055760 Triticum dicoccoides HOM05M004910 ORTHO05M006184 2.3e-09 67.8 223 25.1
TRITD5Bv1G184240 Triticum turgidum HOM05M004910 ORTHO05M006184 2.3e-09 67.8 223 25.1
TRITD5Av1G192190 Triticum turgidum HOM05M004910 ORTHO05M006184 3.0e-09 67.4 223 25.1
Potri.005G101900 Populus trichocarpa HOM05M004910 ORTHO05M006184 3.9e-09 67.0 315 23.8
MCO07G573 Micromonas commoda HOM05M004910 ORTHO05M006184 5.1e-09 66.6 206 27.2
TraesCS5B03G0890500 Triticum aestivum HOM05M004910 ORTHO05M006184 5.1e-09 66.6 223 25.1
GWHGAORA007307 Cenchrus purpureus HOM05M004910 ORTHO05M006184 6.6e-09 66.2 235 22.1
GWHGAORA048490 Cenchrus purpureus HOM05M004910 ORTHO05M006184 8.7e-09 65.9 240 24.6
Pahal.2G358900 Panicum hallii HOM05M004910 ORTHO05M006184 8.7e-09 65.9 228 25.4
Seita.2G300700 Setaria italica HOM05M004910 ORTHO05M006184 8.7e-09 65.9 239 22.2
Sevir.2G311700 Setaria viridis HOM05M004910 ORTHO05M006184 8.7e-09 65.9 235 22.1
V3.Lp_chr5_0G18198 Lolium perenne HOM05M004910 ORTHO05M006184 1.1e-08 65.5 228 25.9
Ma11_g07040 Musa acuminata HOM05M004910 ORTHO05M006184 1.5e-08 65.1 235 23.4
CALSI_Maker00029799 Calamus simplicifolius HOM05M006243 ORTHO05M008134 1.9e-08 64.7 120 36.7
Horvu_MOREX_5H01G519000 Hordeum vulgare HOM05M004910 ORTHO05M006184 3.3e-08 63.9 223 24.7
Ot_Chr2_g06459 Oropetium thomaeum HOM05M004910 ORTHO05M006184 1.3e-07 62.0 225 24.9
Zosma06g11810 Zostera marina HOM05M004910 ORTHO05M006184 1.3e-07 62.0 340 23.2
PH02Gene37020 Phyllostachys edulis HOM05M004910 ORTHO05M006184 2.1e-07 61.2 223 24.2
SEGI_15184 Sequoiadendron giganteum HOM05M006243 ORTHO05M240968 2.8e-07 60.8 59 52.5
Zm00001eb104340 Zea mays B73 HOM05M004910 ORTHO05M006184 3.6e-07 60.5 207 25.6
Misin03G257900 Miscanthus sinensis HOM05M004910 ORTHO05M006184 6.2e-07 59.7 211 21.3
Misin04G272300 Miscanthus sinensis HOM05M004910 ORTHO05M006184 6.2e-07 59.7 229 24.0
Zm00001eb104330 Zea mays B73 HOM05M004910 ORTHO05M006184 6.2e-07 59.7 228 25.4
Zm00001eb104360 Zea mays B73 HOM05M004910 ORTHO05M006184 6.2e-07 59.7 228 25.4
evm.TU.AsparagusV1_09.303.V1.1 Asparagus officinalis HOM05M003409 ORTHO05M004081 1.1e-06 58.9 264 25.0
Sobic.002G290100 Sorghum bicolor HOM05M004910 ORTHO05M006184 1.8e-06 58.2 229 23.6
GWHGAZTO052632 Oryza alta HOM05M004910 ORTHO05M006184 5.3e-06 56.6 347 24.8
GWHGAZTO099042 Oryza alta HOM05M004910 ORTHO05M006184 6.9e-06 56.2 347 23.3
DDU556G0589 Dioscorea dumetorum HOM05M003409 ORTHO05M004081 9.0e-06 55.8 265 24.5


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