Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g056160.4 Solanum lycopersicum HOM05M006499 ORTHO05M008282 6.1e-236 819.7 423 100.0
AT5G48470 Arabidopsis thaliana HOM05M006499 ORTHO05M008282 1.3e-140 503.1 351 74.6
Ma08_g28950 Musa acuminata HOM05M006499 ORTHO05M008282 1.6e-135 486.1 317 78.5
Spipo4G0046100 Spirodela polyrhiza HOM05M006499 ORTHO05M008282 2.1e-135 485.7 321 76.9
Potri.002G251400 Populus trichocarpa HOM05M006499 ORTHO05M008282 1.1e-133 479.9 393 65.9
p5.00_sc00603_p0004 Elaeis guineensis HOM05M006499 ORTHO05M008282 1.4e-131 473.0 392 66.6
DDU556G0503 Dioscorea dumetorum HOM05M006499 ORTHO05M008282 3.1e-131 471.9 317 75.4
CALSI_Maker00028528 Calamus simplicifolius HOM05M006499 ORTHO05M008282 7.0e-131 470.7 419 62.8
evm.TU.AsparagusV1_09.1649.V1.1 Asparagus officinalis HOM05M006499 ORTHO05M008282 1.7e-129 466.1 320 75.6
HPP92_024258 Vanilla planifolia HOM05M006499 ORTHO05M008282 1.5e-128 463.0 308 77.3
Zosma04g00840 Zostera marina HOM05M006499 ORTHO05M008282 1.9e-128 462.6 360 68.3
Asa6G03799 Allium sativum HOM05M006499 ORTHO05M008282 2.7e-127 458.8 310 75.8
Glyma.03G089700 Glycine max HOM05M006499 ORTHO05M008282 5.2e-126 454.5 386 64.2
GWHGAORA020980 Cenchrus purpureus HOM05M006499 ORTHO05M008282 1.5e-125 453.0 323 71.5
GWHGAORA063451 Cenchrus purpureus HOM05M006499 ORTHO05M008282 1.5e-125 453.0 323 71.5
Seita.3G023600 Setaria italica HOM05M006499 ORTHO05M008282 2.6e-125 452.2 323 71.5
Sevir.3G024300 Setaria viridis HOM05M006499 ORTHO05M008282 2.6e-125 452.2 323 71.5
Zm00001eb169280 Zea mays B73 HOM05M006499 ORTHO05M008282 2.6e-125 452.2 323 70.9
Pahal.7G322400 Panicum hallii HOM05M006499 ORTHO05M008282 5.7e-125 451.1 323 71.5
PH02Gene36479 Phyllostachys edulis HOM05M006499 ORTHO05M008282 5.7e-125 451.1 323 71.2
Sobic.001G037500 Sorghum bicolor HOM05M006499 ORTHO05M008282 1.3e-124 449.9 322 71.4
Glyma.16G083300 Glycine max HOM05M006499 ORTHO05M008282 1.7e-124 449.5 363 67.8
OB11G18860 Oryza brachyantha HOM05M006499 ORTHO05M008282 1.7e-124 449.5 323 71.2
Misin02G009600 Miscanthus sinensis HOM05M006499 ORTHO05M008282 2.2e-124 449.1 322 71.1
ATR0686G167 Amborella trichopoda HOM05M006499 ORTHO05M008282 4.8e-124 448.0 349 67.3
V3.Lp_chr5_0G1308 Lolium perenne HOM05M006499 ORTHO05M008282 8.2e-124 447.2 318 70.8
GWHGASIY006766 Secale cereale HOM05M006499 ORTHO05M008282 2.4e-123 445.7 323 69.0
GWHGASIY024553 Secale cereale HOM05M006499 ORTHO05M008282 2.4e-123 445.7 323 69.0
OsR498G1119984600.01 Oryza sativa ssp. indica HOM05M006499 ORTHO05M008282 3.1e-123 445.3 325 70.5
TraesCS5D03G0180400 Triticum aestivum HOM05M006499 ORTHO05M008282 5.3e-123 444.5 323 69.3
TraesCS5A03G0163200 Triticum aestivum HOM05M006499 ORTHO05M008282 7.0e-123 444.1 323 69.0
Ot_Chr10_g26473 Oropetium thomaeum HOM05M006499 ORTHO05M008282 9.1e-123 443.7 323 70.3
AET5Gv20181700 Aegilops tauschii HOM05M006499 ORTHO05M008282 1.2e-122 443.4 323 69.3
Horvu_MOREX_5H01G102400 Hordeum vulgare HOM05M006499 ORTHO05M008282 2.7e-122 442.2 323 69.7
TRIDC5BG011480 Triticum dicoccoides HOM05M006499 ORTHO05M008282 2.7e-122 442.2 317 70.3
GWHGAZTO011716 Oryza alta HOM05M006499 ORTHO05M008282 1.0e-121 440.3 323 69.0
TRIDC5AG009850 Triticum dicoccoides HOM05M006499 ORTHO05M008282 2.2e-121 439.1 309 71.2
EJB05_28148 Eragrostis curvula HOM05M006499 ORTHO05M008282 1.9e-120 436.0 355 65.1
Bradi4g19560 Brachypodium distachyon HOM05M006499 ORTHO05M008282 7.2e-120 434.1 318 69.2
Zm00007a00003481 Zea mays B104 HOM05M006499 ORTHO05M008282 2.1e-119 432.6 320 68.8
Aco021395 Ananas comosus HOM05M006499 ORTHO05M008282 1.2e-117 426.8 318 71.1
GWHGASIY029289 Secale cereale HOM05M006499 ORTHO05M008282 4.4e-117 424.9 309 68.9
TRITD5Av1G031500 Triticum turgidum HOM05M006499 ORTHO05M008282 4.4e-117 424.9 316 67.7
Sspon.01G0062740-1P Saccharum spontaneum HOM05M006499 ORTHO05M008282 1.7e-116 422.9 308 69.8
Dexi7A01G0021620 Digitaria exilis HOM05M006499 ORTHO05M008282 5.2e-110 401.4 323 65.6
Dexi7B01G0022310 Digitaria exilis HOM05M006499 ORTHO05M008282 7.0e-107 391.0 290 69.0
OsKitaake11g115600 Oryza sativa Kitaake HOM05M006499 ORTHO05M008282 3.5e-106 388.7 290 68.3
Os11g0425300 Oryza sativa ssp. japonica HOM05M006499 ORTHO05M008282 3.5e-106 388.7 290 68.3
SEGI_39839 Sequoiadendron giganteum HOM05M006499 ORTHO05M008282 4.5e-106 388.3 319 63.6
TRITD5Bv1G030290 Triticum turgidum HOM05M006499 ORTHO05M008282 7.8e-106 387.5 289 68.2
Zjn_sc00114.1.g00610.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M006499 ORTHO05M008282 1.6e-103 379.8 297 68.7
CDE09G0438 Ceratophyllum demersum HOM05M006499 ORTHO05M008282 3.6e-95 352.1 239 75.7
Sspon.01G0062740-1D Saccharum spontaneum HOM05M006499 ORTHO05M008282 3.4e-93 345.5 322 58.4
TraesCS5B03G0169300 Triticum aestivum HOM05M006499 ORTHO05M008282 6.4e-92 341.3 317 58.4
Aco027516 Ananas comosus HOM05M006499 ORTHO05M008282 4.1e-91 338.6 211 79.6
Sspon.01G0062740-2P Saccharum spontaneum HOM05M006499 ORTHO05M008282 3.2e-83 312.4 212 73.6
Mapoly0125s0038 Marchantia polymorpha HOM05M006499 ORTHO05M008282 4.0e-78 295.4 334 47.3
HPP92_024262 Vanilla planifolia HOM05M006499 ORTHO05M008282 6.8e-78 294.7 195 76.4
SMO367G1011 Selaginella moellendorffii HOM05M006499 ORTHO05M008282 1.2e-77 293.9 313 49.5
Pp3c19_21450 Physcomitrium patens HOM05M006499 ORTHO05M008282 5.1e-73 278.5 318 46.5
AagrBONN_evm.TU.Sc2ySwM_368.2294 Anthoceros agrestis HOM05M006499 ORTHO05M008282 2.9e-68 262.7 236 55.5
MBI11_g07407_MAGBIO Magnolia biondii HOM05M006499 ORTHO05M001517 2.6e-61 239.6 906 27.7
Misin09G113600 Miscanthus sinensis HOM05M006499 ORTHO05M008282 4.6e-58 228.8 164 70.1
CBR_g12604 Chara braunii HOM05M005246 ORTHO05M006744 1.9e-32 143.7 325 32.0
CDE02G0544 Ceratophyllum demersum HOM05M006499 ORTHO05M008282 7.4e-24 115.2 82 70.7
Misin09G113700 Miscanthus sinensis HOM05M006499 ORTHO05M008282 5.3e-22 109.0 92 63.0
Cre09.g393800 Chlamydomonas reinhardtii HOM05M006499 ORTHO05M008282 4.1e-14 82.8 308 27.6
MCO11G451 Micromonas commoda HOM05M006499 ORTHO05M008282 5.9e-13 79.0 256 27.3


User provided reference genes

Program Settings