Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g050069.1 Solanum lycopersicum HOM05M000535 ORTHO05M020591 8.6e-54 212.6 106 100.0
TRITD6Bv1G097820 Triticum turgidum HOM05M000535 ORTHO05M000804 6.0e-23 110.2 108 62.0
Asa2G06251 Allium sativum HOM05M211343 ORTHO05M020591 7.8e-23 109.8 66 78.8
Zm00007a00043673 Zea mays B104 HOM05M000535 ORTHO05M000804 2.4e-16 88.2 109 52.3
Solyc00g500146.1 Solanum lycopersicum HOM05M000535 ORTHO05M000804 2.7e-15 84.7 101 56.4
Aco020651 Ananas comosus HOM05M000535 ORTHO05M020591 6.0e-15 83.6 77 63.6
Solyc09g055840.1 Solanum lycopersicum HOM05M000535 ORTHO05M000804 1.7e-14 82.0 52 86.5
Solyc12g027820.1 Solanum lycopersicum HOM05M000535 ORTHO05M000804 1.7e-14 82.0 52 86.5
ATCG00890 Arabidopsis thaliana HOM05M000535 ORTHO05M000804 2.3e-14 81.6 100 55.0
ATCG01250 Arabidopsis thaliana HOM05M000535 ORTHO05M000804 2.3e-14 81.6 100 55.0
Aco025944 Ananas comosus HOM05M000535 ORTHO05M000804 3.9e-14 80.9 101 53.5
Aco027529 Ananas comosus HOM05M000535 ORTHO05M000804 3.9e-14 80.9 101 53.5
AET4Gv20401700 Aegilops tauschii HOM05M000535 ORTHO05M000804 5.1e-14 80.5 99 53.5
TraesCS4D03G0329300 Triticum aestivum HOM05M000535 ORTHO05M000804 5.1e-14 80.5 99 53.5
Horvu_MOREX_2H01G373900 Hordeum vulgare HOM05M000535 ORTHO05M000804 8.7e-14 79.7 100 52.0
Pahal.5G243800 Panicum hallii HOM05M000535 ORTHO05M000804 1.1e-13 79.3 104 50.0
Glyma.05G094500 Glycine max HOM05M000535 ORTHO05M000804 1.9e-13 78.6 52 82.7
AET1Gv20305700 Aegilops tauschii HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
AET3Gv20245700 Aegilops tauschii HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
AET4Gv20044200 Aegilops tauschii HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
AET5Gv20015900 Aegilops tauschii HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
AET6Gv20471600 Aegilops tauschii HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
AET6Gv20951100 Aegilops tauschii HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
AET7Gv20708600 Aegilops tauschii HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
Asa0G04489 Allium sativum HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
Asa2G05756 Allium sativum HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
Asa3G01532 Allium sativum HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
Asa3G05071 Allium sativum HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
Asa5G05761 Allium sativum HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
Asa7G01607 Allium sativum HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
Asa8G02584 Allium sativum HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
Asa8G05534 Allium sativum HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
Aco024837 Ananas comosus HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
Bradi1g05824 Brachypodium distachyon HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
Bradi3g27346 Brachypodium distachyon HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
Horvu_MOREX_2H01G421000 Hordeum vulgare HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
Ot_Un136_gn40096 Oropetium thomaeum HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
Ot_Un136_gn40109 Oropetium thomaeum HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
Ot_Un168_gn40553 Oropetium thomaeum HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
Ot_Un169_gn40622 Oropetium thomaeum HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
Ot_Un171_gn40671 Oropetium thomaeum HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
Ot_Un3_gn40904 Oropetium thomaeum HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
OsKitaake01g357200 Oryza sativa Kitaake HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
OsKitaake07g119400 Oryza sativa Kitaake HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
OsKitaake10g127401 Oryza sativa Kitaake HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
Pahal.5G333100 Panicum hallii HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
Sobic.010G201266 Sorghum bicolor HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
TraesCS1B03G1047100 Triticum aestivum HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
TraesCS3B03G0294700 Triticum aestivum HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
TraesCS6A03G0461900 Triticum aestivum HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
TraesCS6B03G0597200 Triticum aestivum HOM05M000535 ORTHO05M000804 2.5e-13 78.2 104 49.0
TraesCS7D03G0659200 Triticum aestivum HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
TraesCSU03G0168600 Triticum aestivum HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
TraesCSU03G0276300 Triticum aestivum HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
TRIDC2BG031450 Triticum dicoccoides HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
TRIDC4AG060150 Triticum dicoccoides HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
TRIDC6AG026850 Triticum dicoccoides HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
TRIDC7AG053990 Triticum dicoccoides HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
TRITD1Bv1G201080 Triticum turgidum HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
TRITD3Av1G071490 Triticum turgidum HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
TRITD3Av1G179020 Triticum turgidum HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
TRITD3Av1G245860 Triticum turgidum HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
TRITD6Av1G021980 Triticum turgidum HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
TRITD6Av1G085080 Triticum turgidum HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
Zm00007a00005727 Zea mays B104 HOM05M000535 ORTHO05M000804 2.5e-13 78.2 101 52.5
AET0Gv20061000 Aegilops tauschii HOM05M000535 ORTHO05M000804 3.3e-13 77.8 52 80.8
AET6Gv20428100 Aegilops tauschii HOM05M000535 ORTHO05M000804 3.3e-13 77.8 93 52.7
TraesCS1D03G0460800 Triticum aestivum HOM05M000535 ORTHO05M000804 3.3e-13 77.8 101 52.5
TraesCSU03G0507800 Triticum aestivum HOM05M000535 ORTHO05M000804 3.3e-13 77.8 52 80.8
TRIDC5AG078130 Triticum dicoccoides HOM05M000535 ORTHO05M000804 3.3e-13 77.8 101 52.5
V3.Lp_chr3_0G28 Lolium perenne HOM05M000535 ORTHO05M000804 4.3e-13 77.4 101 51.5
V3.Lp_chr7_0.1G1190 Lolium perenne HOM05M000535 ORTHO05M000804 4.3e-13 77.4 101 51.5
V3.Lp_chr7_0.1G1230 Lolium perenne HOM05M000535 ORTHO05M000804 4.3e-13 77.4 101 51.5
V3.Lp_scaffold_5331G36 Lolium perenne HOM05M000535 ORTHO05M000804 4.3e-13 77.4 101 51.5
V3.Lp_scaffold_891G44 Lolium perenne HOM05M000535 ORTHO05M000804 4.3e-13 77.4 101 51.5
TRIDC4BG041950 Triticum dicoccoides HOM05M000535 ORTHO05M000804 4.3e-13 77.4 101 52.5
AET0Gv20104400 Aegilops tauschii HOM05M000535 ORTHO05M000804 7.3e-13 76.6 101 51.5
OsKitaake05g100800 Oryza sativa Kitaake HOM05M000535 ORTHO05M000804 7.3e-13 76.6 101 52.5
OsR498G0510354100.01 Oryza sativa ssp. indica HOM05M000535 ORTHO05M000804 7.3e-13 76.6 101 52.5
TraesCS5D03G0019200 Triticum aestivum HOM05M000535 ORTHO05M000804 7.3e-13 76.6 101 51.5
TraesCS6A03G0269200 Triticum aestivum HOM05M000535 ORTHO05M000804 7.3e-13 76.6 101 51.5
TRIDC3BG005830 Triticum dicoccoides HOM05M000535 ORTHO05M000804 7.3e-13 76.6 101 51.5
TRITD1Av1G099700 Triticum turgidum HOM05M000535 ORTHO05M000804 7.3e-13 76.6 101 51.5
TRITD6Av1G035690 Triticum turgidum HOM05M000535 ORTHO05M000804 7.3e-13 76.6 101 51.5
TRITD7Av1G208750 Triticum turgidum HOM05M000535 ORTHO05M000804 7.3e-13 76.6 101 51.5
TraesCS4B03G0651100 Triticum aestivum HOM05M000535 ORTHO05M000804 9.6e-13 76.3 68 63.2
TraesCS6D03G0353900 Triticum aestivum HOM05M000535 ORTHO05M000804 9.6e-13 76.3 93 51.6
TRITD4Bv1G144190 Triticum turgidum HOM05M000535 ORTHO05M000804 9.6e-13 76.3 68 63.2
AET3Gv20001700 Aegilops tauschii HOM05M000535 ORTHO05M000804 1.3e-12 75.9 52 78.8
TraesCS6B03G0738500 Triticum aestivum HOM05M000535 ORTHO05M000804 1.3e-12 75.9 52 78.8
TraesCS7A03G0939100 Triticum aestivum HOM05M000535 ORTHO05M000804 1.3e-12 75.9 52 78.8
TRIDC2BG048440 Triticum dicoccoides HOM05M000535 ORTHO05M000804 1.3e-12 75.9 52 78.8
TRIDC6BG058040 Triticum dicoccoides HOM05M000535 ORTHO05M000804 1.3e-12 75.9 52 78.8
TRIDC7AG054090 Triticum dicoccoides HOM05M000535 ORTHO05M000804 1.3e-12 75.9 52 78.8
TRITD3Bv1G038170 Triticum turgidum HOM05M000535 ORTHO05M000804 1.3e-12 75.9 101 51.5
Asa0G04973 Allium sativum HOM05M000535 ORTHO05M000804 1.6e-12 75.5 100 50.0
TraesCS4D03G0348100 Triticum aestivum HOM05M000535 ORTHO05M000804 1.6e-12 75.5 88 52.3
TraesCS5D03G1009500 Triticum aestivum HOM05M000535 ORTHO05M000804 2.1e-12 75.1 101 51.5
TRIDC5AG060090 Triticum dicoccoides HOM05M000535 ORTHO05M000804 2.1e-12 75.1 101 51.5
Potri.011G075051 Populus trichocarpa HOM05M000535 ORTHO05M000804 2.8e-12 74.7 101 51.5
Glyma.01G201500 Glycine max HOM05M000535 ORTHO05M000804 3.6e-12 74.3 52 78.8
Pahal.2G175500 Panicum hallii HOM05M000535 ORTHO05M000804 3.6e-12 74.3 101 51.5
TraesCS1A03G0423800 Triticum aestivum HOM05M000535 ORTHO05M000804 3.6e-12 74.3 101 50.5
AET5Gv20842600 Aegilops tauschii HOM05M000535 ORTHO05M000804 1.4e-11 72.4 52 76.9
Solyc11g021090.3 Solanum lycopersicum HOM05M000535 ORTHO05M000804 1.4e-11 72.4 101 51.5
TRIDC2AG014140 Triticum dicoccoides HOM05M000535 ORTHO05M000804 1.4e-11 72.4 52 75.0
Asa0G01432 Allium sativum HOM05M000535 ORTHO05M000804 2.4e-11 71.6 51 74.5
GWHGAORA029267 Cenchrus purpureus HOM05M000535 ORTHO05M000804 4.0e-11 70.9 39 92.3
Seita.J017200 Setaria italica HOM05M000535 ORTHO05M000804 4.0e-11 70.9 96 51.0
AET4Gv20432700 Aegilops tauschii HOM05M000535 ORTHO05M000804 5.3e-11 70.5 52 73.1
Solyc01g017260.1 Solanum lycopersicum HOM05M000535 ORTHO05M000804 6.9e-11 70.1 99 46.5
TraesCS7B03G0242700 Triticum aestivum HOM05M000535 ORTHO05M000804 6.9e-11 70.1 100 47.0
Asa0G01497 Allium sativum HOM05M000535 ORTHO05M000804 9.0e-11 69.7 52 71.2
TraesCS1D03G0338800 Triticum aestivum HOM05M000535 ORTHO05M000804 9.0e-11 69.7 52 73.1
OB05G25860 Oryza brachyantha HOM05M000535 ORTHO05M000804 2.0e-10 68.6 48 75.0
TraesCS6B03G0604900 Triticum aestivum HOM05M000535 ORTHO05M000804 2.0e-10 68.6 49 77.6
TRIDC4AG024240 Triticum dicoccoides HOM05M000535 ORTHO05M000804 2.0e-10 68.6 52 71.2
Solyc04g039790.3 Solanum lycopersicum HOM05M000535 ORTHO05M000804 2.6e-10 68.2 82 53.7
TRITD3Bv1G076070 Triticum turgidum HOM05M000535 ORTHO05M000804 5.8e-10 67.0 93 50.5
TraesCS5D03G0952100 Triticum aestivum HOM05M000535 ORTHO05M000804 2.2e-09 65.1 52 71.2
Asa4G00084 Allium sativum HOM05M000535 ORTHO05M000804 1.1e-08 62.8 103 46.6
Aco020233 Ananas comosus HOM05M000535 ORTHO05M000804 1.4e-08 62.4 62 61.3
AET7Gv20567700 Aegilops tauschii HOM05M000535 ORTHO05M000804 7.9e-07 56.6 29 96.6
Aco020647 Ananas comosus HOM05M008575 ORTHO05M020591 1.0e-06 56.2 57 52.6
AET0Gv20104300 Aegilops tauschii HOM05M000535 ORTHO05M000804 2.3e-06 55.1 29 93.1


User provided reference genes

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