Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g042480.2 Solanum lycopersicum HOM05M004567 ORTHO05M005189 1.8e-78 295.0 149 100.0
Solyc03g095680.2 Solanum lycopersicum HOM05M004567 ORTHO05M005189 7.0e-62 240.0 192 69.3
Solyc12g043070.2 Solanum lycopersicum HOM05M004567 ORTHO05M005189 1.2e-61 239.2 192 69.3
Solyc07g064540.3 Solanum lycopersicum HOM05M004567 ORTHO05M005189 1.0e-60 236.1 192 68.8
Glyma.02G219200 Glycine max HOM05M004567 ORTHO05M005189 9.3e-22 106.7 108 50.0
Potri.019G060900 Populus trichocarpa HOM05M004567 ORTHO05M005189 3.5e-21 104.8 110 50.9
AT2G40770 Arabidopsis thaliana HOM05M004567 ORTHO05M005189 6.9e-17 90.5 108 46.3
DDU059G0039 Dioscorea dumetorum HOM05M004567 ORTHO05M005189 4.9e-15 84.3 124 42.7
CALSI_Maker00029602 Calamus simplicifolius HOM05M004567 ORTHO05M005189 2.7e-13 78.6 109 41.3
Ma03_g09570 Musa acuminata HOM05M004567 ORTHO05M005189 1.0e-12 76.6 109 41.3
MBI15_g39394_MAGBIO Magnolia biondii HOM05M004567 ORTHO05M005189 3.9e-12 74.7 105 41.9
GWHGAORA049971 Cenchrus purpureus HOM05M004567 ORTHO05M005189 5.1e-12 74.3 111 38.7
p5.00_sc00007_p0111 Elaeis guineensis HOM05M004567 ORTHO05M005189 1.1e-11 73.2 109 39.4
Seita.2G433700 Setaria italica HOM05M004567 ORTHO05M005189 1.1e-11 73.2 135 39.3
Sevir.2G446300 Setaria viridis HOM05M004567 ORTHO05M005189 1.1e-11 73.2 135 39.3
EJB05_58008 Eragrostis curvula HOM05M004567 ORTHO05M005189 1.9e-11 72.4 111 36.0
Asa5G02476 Allium sativum HOM05M004567 ORTHO05M005189 3.3e-11 71.6 101 38.6
Asa5G02477 Allium sativum HOM05M004567 ORTHO05M005189 3.3e-11 71.6 101 38.6
evm.TU.AsparagusV1_07.681.V1.1 Asparagus officinalis HOM05M004567 ORTHO05M005189 1.3e-10 69.7 107 42.1
Pahal.2G489400 Panicum hallii HOM05M004567 ORTHO05M005189 1.3e-10 69.7 128 34.4
Zjn_sc00001.1.g00820.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M004567 ORTHO05M005189 2.1e-10 68.9 111 34.2
Misin03G348100 Miscanthus sinensis HOM05M004567 ORTHO05M005189 3.7e-10 68.2 132 34.1
Ot_Chr7_g10195 Oropetium thomaeum HOM05M004567 ORTHO05M005189 4.8e-10 67.8 111 34.2
Ot_Chr7_gn38055 Oropetium thomaeum HOM05M004567 ORTHO05M005189 4.8e-10 67.8 111 34.2
Sobic.002G418600 Sorghum bicolor HOM05M004567 ORTHO05M005189 6.3e-10 67.4 132 33.3
Sspon.02G0000930-1A Saccharum spontaneum HOM05M004567 ORTHO05M005189 8.2e-10 67.0 111 35.1
Zm00007a00050370 Zea mays B104 HOM05M004567 ORTHO05M005189 1.1e-09 66.6 110 35.5
PH02Gene27616 Phyllostachys edulis HOM05M004567 ORTHO05M005189 2.4e-09 65.5 113 33.6
GWHGASIY006485 Secale cereale HOM05M004567 ORTHO05M005189 2.4e-09 65.5 137 36.5
TraesCS2B03G0296500 Triticum aestivum HOM05M004567 ORTHO05M005189 2.4e-09 65.5 137 35.8
CDE04G3054 Ceratophyllum demersum HOM05M004567 ORTHO05M005189 5.3e-09 64.3 114 36.0
Sspon.02G0000930-2C Saccharum spontaneum HOM05M004567 ORTHO05M005189 5.3e-09 64.3 91 36.3
AET2Gv20211200 Aegilops tauschii HOM05M004567 ORTHO05M005189 1.5e-08 62.8 137 35.0
GWHGASIY006463 Secale cereale HOM05M004567 ORTHO05M005189 1.5e-08 62.8 137 35.8
TraesCS2D03G0221200 Triticum aestivum HOM05M004567 ORTHO05M005189 1.5e-08 62.8 137 35.0
HPP92_012544 Vanilla planifolia HOM05M004567 ORTHO05M005189 1.5e-08 62.8 83 44.6
Bradi1g17650 Brachypodium distachyon HOM05M004567 ORTHO05M005189 4.5e-08 61.2 123 35.8
V3.Lp_chr2_0G3156 Lolium perenne HOM05M004567 ORTHO05M005189 4.5e-08 61.2 137 34.3
TRIDC2BG015240 Triticum dicoccoides HOM05M004567 ORTHO05M005189 5.9e-08 60.8 94 38.3
Dexi2A01G0036960 Digitaria exilis HOM05M004567 ORTHO05M005189 1.3e-07 59.7 111 32.4
Dexi2B01G0035760 Digitaria exilis HOM05M004567 ORTHO05M005189 1.3e-07 59.7 111 32.4
TraesCS2A03G0215600 Triticum aestivum HOM05M004567 ORTHO05M005189 6.5e-07 57.4 108 36.1
TRIDC2AG012460 Triticum dicoccoides HOM05M004567 ORTHO05M005189 6.5e-07 57.4 108 36.1
TRITD2Av1G028070 Triticum turgidum HOM05M004567 ORTHO05M005189 6.5e-07 57.4 108 36.1
Horvu_MOREX_7H01G433200 Hordeum vulgare HOM05M004567 ORTHO05M005189 8.5e-07 57.0 107 35.5
ATR1127G041 Amborella trichopoda HOM05M004567 ORTHO05M005189 1.1e-06 56.6 116 37.1
OB07G31910 Oryza brachyantha HOM05M004567 ORTHO05M005189 2.5e-06 55.5 112 32.1
Zosma01g29230 Zostera marina HOM05M004567 ORTHO05M005189 2.5e-06 55.5 106 32.1

Aegilops tauschii (1 genes)
Allium sativum (2 genes)
Amborella trichopoda (1 genes)
Ananas comosus (0 genes)
Anthoceros agrestis (0 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus purpureus (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (2 genes)
Dioscorea dumetorum (1 genes)
Elaeis guineensis (1 genes)
Eragrostis curvula (1 genes)
Glycine max (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Magnolia biondii (1 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (1 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (2 genes)
Oryza alta (0 genes)
Oryza brachyantha (1 genes)
Oryza sativa Kitaake (0 genes)
Oryza sativa ssp. indica (0 genes)
Oryza sativa ssp. japonica (0 genes)
Panicum hallii (1 genes)
Phyllostachys edulis (1 genes)
Physcomitrium patens (0 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (2 genes)
Secale cereale (2 genes)
Selaginella moellendorffii (0 genes)
Sequoiadendron giganteum (0 genes)
Setaria italica (1 genes)
Setaria viridis (1 genes)
Solanum lycopersicum (4 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (0 genes)
Triticum aestivum (3 genes)
Triticum dicoccoides (2 genes)
Triticum turgidum (1 genes)
Vanilla planifolia (1 genes)
Zea mays B73 (0 genes)
Zea mays B104 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

Program Settings