Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g011010.3 Solanum lycopersicum HOM05M005758 ORTHO05M006555 5.2e-57 223.4 113 100.0
Zosma01g16180 Zostera marina HOM05M005758 ORTHO05M006555 9.2e-30 132.9 111 64.0
GWHGAZTO033799 Oryza alta HOM05M005758 ORTHO05M006555 1.6e-29 132.1 85 72.9
OB05G19120 Oryza brachyantha HOM05M005758 ORTHO05M006555 7.8e-29 129.8 106 62.3
SEGI_39626 Sequoiadendron giganteum HOM05M005758 ORTHO05M006555 7.8e-29 129.8 109 64.2
MBI05_g35632_MAGBIO Magnolia biondii HOM05M005758 ORTHO05M006555 1.0e-28 129.4 112 61.6
Sobic.002G033800 Sorghum bicolor HOM05M005758 ORTHO05M006555 3.0e-28 127.9 88 68.2
Ot_Chr5_gn36453 Oropetium thomaeum HOM05M005758 ORTHO05M006555 3.9e-28 127.5 106 61.3
GWHGAORA016597 Cenchrus purpureus HOM05M005758 ORTHO05M006555 5.0e-28 127.1 101 63.4
OsKitaake05g099400 Oryza sativa Kitaake HOM05M005758 ORTHO05M006555 5.0e-28 127.1 110 59.1
OsR498G0510348500.01 Oryza sativa ssp. indica HOM05M005758 ORTHO05M006555 5.0e-28 127.1 110 59.1
Os05g0292800 Oryza sativa ssp. japonica HOM05M005758 ORTHO05M006555 5.0e-28 127.1 110 59.1
Misin04G027300 Miscanthus sinensis HOM05M005758 ORTHO05M006555 8.6e-28 126.3 85 70.6
Sspon.02G0024160-3C Saccharum spontaneum HOM05M005758 ORTHO05M006555 8.6e-28 126.3 85 69.4
Dexi4A01G0010830 Digitaria exilis HOM05M005758 ORTHO05M006555 1.1e-27 125.9 85 69.4
EJB05_34695 Eragrostis curvula HOM05M005758 ORTHO05M006555 1.1e-27 125.9 104 60.6
Zm00001eb299980 Zea mays B73 HOM05M005758 ORTHO05M006555 1.1e-27 125.9 111 60.4
Dexi4B01G0011120 Digitaria exilis HOM05M005758 ORTHO05M006555 1.5e-27 125.6 85 68.2
Misin14G068800 Miscanthus sinensis HOM05M005758 ORTHO05M006555 1.5e-27 125.6 106 57.5
Potri.006G088200 Populus trichocarpa HOM05M005758 ORTHO05M006555 1.9e-27 125.2 111 61.3
DDU188G0022 Dioscorea dumetorum HOM05M005758 ORTHO05M006555 2.5e-27 124.8 114 59.6
p5.00_sc00069_p0027 Elaeis guineensis HOM05M005758 ORTHO05M006555 2.5e-27 124.8 103 61.2
Seita.9G423600 Setaria italica HOM05M005758 ORTHO05M006555 2.5e-27 124.8 85 69.4
Sevir.9G427800 Setaria viridis HOM05M005758 ORTHO05M006555 2.5e-27 124.8 85 69.4
TraesCS6B03G1261000 Triticum aestivum HOM05M005758 ORTHO05M006555 3.3e-27 124.4 79 72.2
TRITD6Bv1G224120 Triticum turgidum HOM05M005758 ORTHO05M006555 3.3e-27 124.4 79 72.2
Glyma.07G135300 Glycine max HOM05M005758 ORTHO05M006555 4.3e-27 124.0 111 58.6
AET6Gv20986600 Aegilops tauschii HOM05M005758 ORTHO05M006555 5.6e-27 123.6 79 70.9
GWHGAORA056644 Cenchrus purpureus HOM05M000806 ORTHO05M006555 5.6e-27 123.6 85 68.2
Pahal.4G282000 Panicum hallii HOM05M005758 ORTHO05M006555 5.6e-27 123.6 85 68.2
Seita.4G117400 Setaria italica HOM05M005758 ORTHO05M006555 7.3e-27 123.2 85 68.2
Sevir.4G118400 Setaria viridis HOM05M005758 ORTHO05M006555 7.3e-27 123.2 85 68.2
ATR0559G337 Amborella trichopoda HOM05M005758 ORTHO05M006555 9.5e-27 122.9 73 80.8
V3.Lp_chr5_0G5798 Lolium perenne HOM05M005758 ORTHO05M006555 9.5e-27 122.9 79 69.6
GWHGASIY034419 Secale cereale HOM05M005758 ORTHO05M006555 9.5e-27 122.9 79 70.9
CALSI_Maker00013544 Calamus simplicifolius HOM05M005758 ORTHO05M006555 1.2e-26 122.5 111 55.0
DDU059G0426 Dioscorea dumetorum HOM05M005758 ORTHO05M006555 1.2e-26 122.5 114 58.8
evm.TU.AsparagusV1_02.111.V1.1 Asparagus officinalis HOM05M005758 ORTHO05M006555 1.6e-26 122.1 112 58.0
Bradi4g07440 Brachypodium distachyon HOM05M005758 ORTHO05M006555 2.1e-26 121.7 79 69.6
TraesCS6A03G1022300 Triticum aestivum HOM05M005758 ORTHO05M006555 2.1e-26 121.7 79 69.6
TRIDC6AG059840 Triticum dicoccoides HOM05M005758 ORTHO05M006555 2.1e-26 121.7 79 69.6
TRIDC6BG071010 Triticum dicoccoides HOM05M005758 ORTHO05M006555 2.1e-26 121.7 79 69.6
TRITD6Av1G223680 Triticum turgidum HOM05M005758 ORTHO05M006555 2.1e-26 121.7 79 69.6
Zjn_sc00024.1.g02490.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M005758 ORTHO05M006555 2.1e-26 121.7 106 57.5
Ma10_g26600 Musa acuminata HOM05M005758 ORTHO05M006555 2.8e-26 121.3 105 58.1
Asa0G03523 Allium sativum HOM05M005758 ORTHO05M006555 4.7e-26 120.6 113 58.4
Horvu_MOREX_6H01G594500 Hordeum vulgare HOM05M005758 ORTHO05M006555 8.1e-26 119.8 79 68.4
TraesCS6D03G0900800 Triticum aestivum HOM05M005758 ORTHO05M006555 1.4e-25 119.0 79 68.4
Misin03G014700 Miscanthus sinensis HOM05M005758 ORTHO05M006555 1.8e-25 118.6 80 68.8
OsR498G1221602100.01 Oryza sativa ssp. indica HOM05M005758 ORTHO05M006555 5.2e-25 117.1 90 62.2
Os12g0480100 Oryza sativa ssp. japonica HOM05M005758 ORTHO05M006555 5.2e-25 117.1 90 62.2
AT5G02120 Arabidopsis thaliana HOM05M005758 ORTHO05M006555 6.8e-25 116.7 79 73.4
Sspon.02G0024160-1A Saccharum spontaneum HOM05M005758 ORTHO05M006555 9.8e-24 112.8 85 64.7
PH02Gene35217 Phyllostachys edulis HOM05M005758 ORTHO05M006555 2.2e-23 111.7 73 69.9
Sspon.02G0024160-2B Saccharum spontaneum HOM05M005758 ORTHO05M006555 3.7e-23 110.9 64 81.2
Zm00001eb090340 Zea mays B73 HOM05M005758 ORTHO05M006555 6.4e-23 110.2 64 81.2
CDE06G2558 Ceratophyllum demersum HOM05M000844 ORTHO05M006555 1.9e-22 108.6 73 69.9
Aco016838 Ananas comosus HOM05M005758 ORTHO05M006555 2.1e-21 105.1 64 76.6
Pp3c18_21050 Physcomitrium patens HOM05M005758 ORTHO05M006555 1.0e-20 102.8 88 56.8
AagrBONN_evm.TU.Sc2ySwM_344.1593 Anthoceros agrestis HOM05M005758 ORTHO05M006555 1.3e-20 102.4 75 64.0
Mapoly0151s0005 Marchantia polymorpha HOM05M005758 ORTHO05M006555 7.3e-19 96.7 71 64.8
SEGI_14936 Sequoiadendron giganteum HOM05M005758 ORTHO05M006555 7.3e-19 96.7 87 60.9
Pp3c22_8010 Physcomitrium patens HOM05M005758 ORTHO05M006555 9.5e-19 96.3 81 56.8
GWHGAZTO082798 Oryza alta HOM05M005758 ORTHO05M006555 8.1e-18 93.2 88 56.8
Zm00001eb372120 Zea mays B73 HOM05M005758 ORTHO05M006555 1.1e-17 92.8 54 81.5
CBR_g4596 Chara braunii HOM05M005758 ORTHO05M006555 1.8e-17 92.0 82 57.3
HPP92_019240 Vanilla planifolia HOM05M005758 ORTHO05M006555 1.8e-17 92.0 116 50.0
Misin15G085700 Miscanthus sinensis HOM05M005758 ORTHO05M006555 4.0e-17 90.9 64 71.9
GWHGAZTO066827 Oryza alta HOM05M005758 ORTHO05M006555 5.8e-16 87.0 84 53.6
PH02Gene36977 Phyllostachys edulis HOM05M005758 ORTHO05M006555 1.3e-15 85.9 97 51.5
OsKitaake12g127700 Oryza sativa Kitaake HOM05M005758 ORTHO05M006555 1.7e-15 85.5 68 61.8
Glyma.18G185300 Glycine max HOM05M005758 ORTHO05M006555 2.9e-15 84.7 110 50.0
Zm00007a00025233 Zea mays B104 HOM05M005758 ORTHO05M006555 8.6e-12 73.2 42 81.0
Zm00007a00034338 Zea mays B104 HOM05M005758 ORTHO05M006555 8.6e-12 73.2 42 81.0
Cre02.g109950 Chlamydomonas reinhardtii HOM05M005758 ORTHO05M006555 4.4e-08 60.8 75 44.0
MCO09G323 Micromonas commoda HOM05M005758 ORTHO05M006555 6.4e-07 57.0 72 41.7
PRCOL_00006531 Prasinoderma coloniale HOM05M005758 ORTHO05M006555 1.9e-06 55.5 57 43.9


User provided reference genes

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