Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g068660.1 Solanum lycopersicum HOM05M001760 ORTHO05M001888 5.2e-53 209.9 99 100.0
Solyc08g068610.3 Solanum lycopersicum HOM05M001760 ORTHO05M001888 3.9e-32 140.6 77 81.8
Solyc08g068665.1 Solanum lycopersicum HOM05M001760 ORTHO05M001888 5.0e-32 140.2 87 74.7
Solyc08g068600.3 Solanum lycopersicum HOM05M001760 ORTHO05M001888 8.6e-32 139.4 77 80.5
Solyc08g068630.4 Solanum lycopersicum HOM05M001760 ORTHO05M001888 1.1e-31 139.0 77 80.5
Solyc08g068640.4 Solanum lycopersicum HOM05M001760 ORTHO05M001888 3.3e-31 137.5 77 79.2
Solyc08g068680.4 Solanum lycopersicum HOM05M001760 ORTHO05M001888 3.3e-31 137.5 77 79.2
Solyc08g006740.3 Solanum lycopersicum HOM05M001760 ORTHO05M001888 1.5e-28 128.6 77 71.4
Solyc08g006750.4 Solanum lycopersicum HOM05M001760 ORTHO05M001888 1.5e-28 128.6 76 72.4
Solyc08g066250.4 Solanum lycopersicum HOM05M001760 ORTHO05M001888 1.7e-24 115.2 76 63.2
Solyc08g066260.3 Solanum lycopersicum HOM05M001760 ORTHO05M001888 3.0e-24 114.4 76 63.2
Solyc08g066220.4 Solanum lycopersicum HOM05M001760 ORTHO05M001888 1.5e-23 112.1 76 61.8
Solyc08g016770.4 Solanum lycopersicum HOM05M001760 ORTHO05M001888 3.3e-23 110.9 75 65.3
Solyc08g066240.3 Solanum lycopersicum HOM05M001760 ORTHO05M001888 3.3e-23 110.9 76 61.8
Solyc08g068620.3 Solanum lycopersicum HOM05M001760 ORTHO05M001888 4.4e-20 100.5 53 84.9
Glyma.08G076400 Glycine max HOM05M001760 ORTHO05M001888 1.9e-15 85.1 73 47.9
Solyc04g071140.3 Solanum lycopersicum HOM05M001760 ORTHO05M001888 1.9e-15 85.1 74 48.6
V3.Lp_chr2_0G16644 Lolium perenne HOM05M001760 ORTHO05M001888 3.3e-15 84.3 73 47.9
Mapoly0067s0048 Marchantia polymorpha HOM05M001760 ORTHO05M001888 7.3e-15 83.2 73 46.6
Pp3c3_22850 Physcomitrium patens HOM05M001760 ORTHO05M001888 7.3e-15 83.2 74 45.9
Potri.005G190500 Populus trichocarpa HOM05M001760 ORTHO05M001888 1.2e-14 82.4 74 45.9
Glyma.08G181700 Glycine max HOM05M001760 ORTHO05M001888 1.6e-14 82.0 77 42.9
Glyma.15G050600 Glycine max HOM05M001760 ORTHO05M001888 1.6e-14 82.0 77 42.9
PH02Gene46515 Phyllostachys edulis HOM05M001760 ORTHO05M001888 2.1e-14 81.6 73 46.6
SMO174G0152 Selaginella moellendorffii HOM05M001760 ORTHO05M001888 2.1e-14 81.6 73 45.2
Spipo3G0065400 Spirodela polyrhiza HOM05M001760 ORTHO05M001888 2.1e-14 81.6 74 45.9
ATR0772G131 Amborella trichopoda HOM05M001760 ORTHO05M001888 2.8e-14 81.3 74 45.9
Bradi5g09817 Brachypodium distachyon HOM05M001760 ORTHO05M001888 2.8e-14 81.3 73 46.6
EJB05_24740 Eragrostis curvula HOM05M001760 ORTHO05M001888 2.8e-14 81.3 74 47.3
SEGI_24105 Sequoiadendron giganteum HOM05M001760 ORTHO05M001888 2.8e-14 81.3 74 44.6
Aco007843 Ananas comosus HOM05M001760 ORTHO05M001888 3.6e-14 80.9 74 44.6
AagrBONN_evm.TU.Sc2ySwM_228.1470 Anthoceros agrestis HOM05M001760 ORTHO05M001888 3.6e-14 80.9 73 45.2
Ma06_g27120 Musa acuminata HOM05M001760 ORTHO05M001888 3.6e-14 80.9 74 44.6
Zosma05g02810 Zostera marina HOM05M001760 ORTHO05M001888 3.6e-14 80.9 74 44.6
CDE06G0991 Ceratophyllum demersum HOM05M001760 ORTHO05M001888 4.7e-14 80.5 73 45.2
CDE08G0925 Ceratophyllum demersum HOM05M001760 ORTHO05M001888 4.7e-14 80.5 73 45.2
OsKitaake10g003000 Oryza sativa Kitaake HOM05M001760 ORTHO05M001888 4.7e-14 80.5 76 46.1
Pp3c4_17670 Physcomitrium patens HOM05M001760 ORTHO05M001888 4.7e-14 80.5 73 45.2
Potri.002G069800 Populus trichocarpa HOM05M001760 ORTHO05M001888 4.7e-14 80.5 74 44.6
Bradi3g45260 Brachypodium distachyon HOM05M001760 ORTHO05M001888 6.2e-14 80.1 74 44.6
EJB05_21393 Eragrostis curvula HOM05M001760 ORTHO05M001888 6.2e-14 80.1 74 44.6
V3.Lp_chr6_0G10570 Lolium perenne HOM05M001760 ORTHO05M001888 6.2e-14 80.1 74 44.6
Misin08G157800 Miscanthus sinensis HOM05M001760 ORTHO05M001888 6.2e-14 80.1 74 44.6
Ot_Chr1_g11390 Oropetium thomaeum HOM05M001760 ORTHO05M001888 6.2e-14 80.1 74 44.6
GWHGAZTO007261 Oryza alta HOM05M001760 ORTHO05M001888 6.2e-14 80.1 73 47.9
OsR498G1018014500.01 Oryza sativa ssp. indica HOM05M001760 ORTHO05M001888 6.2e-14 80.1 76 46.1
Pahal.1G260500 Panicum hallii HOM05M001760 ORTHO05M001888 6.2e-14 80.1 74 44.6
PH02Gene44071 Phyllostachys edulis HOM05M001760 ORTHO05M001888 6.2e-14 80.1 74 44.6
Sspon.04G0010630-2B Saccharum spontaneum HOM05M001760 ORTHO05M001888 6.2e-14 80.1 74 44.6
Sspon.04G0010630-4D Saccharum spontaneum HOM05M001760 ORTHO05M001888 6.2e-14 80.1 74 44.6
Sobic.004G170200 Sorghum bicolor HOM05M001760 ORTHO05M001888 6.2e-14 80.1 74 44.6
AET2Gv20676800 Aegilops tauschii HOM05M001760 ORTHO05M001888 8.1e-14 79.7 73 43.8
Asa7G07635 Allium sativum HOM05M001760 ORTHO05M001888 8.1e-14 79.7 74 43.2
Horvu_MOREX_2H01G445300 Hordeum vulgare HOM05M001760 ORTHO05M001888 8.1e-14 79.7 73 43.8
GWHGASIY008750 Secale cereale HOM05M001760 ORTHO05M001888 8.1e-14 79.7 73 43.8
GWHGASIY043327 Secale cereale HOM05M001760 ORTHO05M001888 8.1e-14 79.7 73 43.8
TraesCS2A03G0744500 Triticum aestivum HOM05M001760 ORTHO05M001888 8.1e-14 79.7 73 43.8
TraesCS2B03G0821500 Triticum aestivum HOM05M001760 ORTHO05M001888 8.1e-14 79.7 73 43.8
TraesCS2D03G0687000 Triticum aestivum HOM05M001760 ORTHO05M001888 8.1e-14 79.7 73 43.8
TRIDC2AG043360 Triticum dicoccoides HOM05M001760 ORTHO05M001888 8.1e-14 79.7 73 43.8
TRITD2Av1G182480 Triticum turgidum HOM05M001760 ORTHO05M001888 8.1e-14 79.7 73 43.8
TRITD2Bv1G149630 Triticum turgidum HOM05M001760 ORTHO05M001888 8.1e-14 79.7 73 43.8
CALSI_Maker00032563 Calamus simplicifolius HOM05M001760 ORTHO05M001888 1.1e-13 79.3 74 43.2
Glyma.10G227600 Glycine max HOM05M001760 ORTHO05M001888 1.1e-13 79.3 77 48.1
evm.TU.AsparagusV1_09.150.V1.1 Asparagus officinalis HOM05M001760 ORTHO05M001888 1.4e-13 79.0 73 43.8
DDU161G0015 Dioscorea dumetorum HOM05M001760 ORTHO05M001888 1.4e-13 79.0 73 43.8
DDU163G0004 Dioscorea dumetorum HOM05M001760 ORTHO05M001888 1.4e-13 79.0 73 43.8
DDU556G0075 Dioscorea dumetorum HOM05M001760 ORTHO05M001888 1.4e-13 79.0 73 43.8
Misin07G373700 Miscanthus sinensis HOM05M001760 ORTHO05M001888 1.4e-13 79.0 74 44.6
PH02Gene30680 Phyllostachys edulis HOM05M001760 ORTHO05M001888 1.4e-13 79.0 73 45.2
GWHGAORA059359 Cenchrus purpureus HOM05M001760 ORTHO05M001888 1.8e-13 78.6 74 43.2
Dexi1A01G0016380 Digitaria exilis HOM05M001760 ORTHO05M001888 1.8e-13 78.6 74 43.2
Dexi1B01G0015300 Digitaria exilis HOM05M001760 ORTHO05M001888 1.8e-13 78.6 74 43.2
DDU739G0307 Dioscorea dumetorum HOM05M001760 ORTHO05M001888 1.8e-13 78.6 74 43.2
Ma09_g08470 Musa acuminata HOM05M001760 ORTHO05M001888 1.8e-13 78.6 74 43.2
Ma10_g10490 Musa acuminata HOM05M001760 ORTHO05M001888 1.8e-13 78.6 74 43.2
OB02G27350 Oryza brachyantha HOM05M001760 ORTHO05M001888 1.8e-13 78.6 74 43.2
Seita.1G186500 Setaria italica HOM05M001760 ORTHO05M001888 1.8e-13 78.6 74 43.2
Sevir.1G190400 Setaria viridis HOM05M001760 ORTHO05M001888 1.8e-13 78.6 74 43.2
Zm00001eb243180 Zea mays B73 HOM05M001760 ORTHO05M001888 1.8e-13 78.6 74 43.2
Zm00007a00022086 Zea mays B104 HOM05M001760 ORTHO05M001888 1.8e-13 78.6 74 43.2
Zjn_sc00017.1.g03750.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M001760 ORTHO05M001888 1.8e-13 78.6 74 43.2
AT1G43710 Arabidopsis thaliana HOM05M001760 ORTHO05M001888 2.4e-13 78.2 74 44.6
GWHGAORA023926 Cenchrus purpureus HOM05M001760 ORTHO05M001888 2.4e-13 78.2 74 43.2
MBI12_g36304_MAGBIO Magnolia biondii HOM05M001760 ORTHO05M001888 2.4e-13 78.2 73 43.8
GWHGAZTO059605 Oryza alta HOM05M001760 ORTHO05M001888 2.4e-13 78.2 73 46.6
GWHGAZTO070525 Oryza alta HOM05M001760 ORTHO05M001888 2.4e-13 78.2 74 41.9
OsKitaake02g199400 Oryza sativa Kitaake HOM05M001760 ORTHO05M001888 2.4e-13 78.2 74 41.9
OsR498G0204036700.01 Oryza sativa ssp. indica HOM05M001760 ORTHO05M001888 2.4e-13 78.2 74 41.9
Os02g0541325 Oryza sativa ssp. japonica HOM05M001760 ORTHO05M001888 2.4e-13 78.2 74 41.9
V3.Lp_chr3_0G25422 Lolium perenne HOM05M001760 ORTHO05M001888 3.1e-13 77.8 73 45.2
OB10G10320 Oryza brachyantha HOM05M001760 ORTHO05M001888 4.0e-13 77.4 73 45.2
HPP92_026235 Vanilla planifolia HOM05M001760 ORTHO05M001888 4.0e-13 77.4 74 41.9
Horvu_MOREX_3H01G688700 Hordeum vulgare HOM05M001760 ORTHO05M001888 6.8e-13 76.6 73 41.1
TraesCS3B03G1452000 Triticum aestivum HOM05M001760 ORTHO05M001888 6.8e-13 76.6 73 41.1
AET3Gv21203100 Aegilops tauschii HOM05M001760 ORTHO05M001888 8.9e-13 76.3 73 41.1
GWHGASIY035215 Secale cereale HOM05M001760 ORTHO05M001888 8.9e-13 76.3 73 41.1
TraesCS3D03G1150200 Triticum aestivum HOM05M001760 ORTHO05M001888 8.9e-13 76.3 73 41.1
TRITD3Av1G278210 Triticum turgidum HOM05M001760 ORTHO05M001888 8.9e-13 76.3 73 41.1
CBR_g24274 Chara braunii HOM05M001760 ORTHO05M001888 1.2e-12 75.9 77 44.2
Glyma.10G226200 Glycine max HOM05M001760 ORTHO05M001888 1.2e-12 75.9 77 48.1
DDU739G0334 Dioscorea dumetorum HOM05M001760 ORTHO05M001888 1.5e-12 75.5 73 41.1
Sspon.04G0032740-1C Saccharum spontaneum HOM05M001760 ORTHO05M001888 1.5e-12 75.5 68 47.1
TRIDC3BG083750 Triticum dicoccoides HOM05M001760 ORTHO05M001888 1.5e-12 75.5 77 39.0
Cre01.g038250 Chlamydomonas reinhardtii HOM05M001760 ORTHO05M001888 2.0e-12 75.1 70 41.4
Sspon.04G0010630-1P Saccharum spontaneum HOM05M001760 ORTHO05M001888 2.0e-12 75.1 65 49.2
Sspon.04G0010630-3C Saccharum spontaneum HOM05M001760 ORTHO05M001888 2.0e-12 75.1 65 49.2
Sspon.04G0010630-3P Saccharum spontaneum HOM05M001760 ORTHO05M001888 2.0e-12 75.1 65 49.2
PH02Gene49140 Phyllostachys edulis HOM05M001760 ORTHO05M001888 2.6e-12 74.7 73 45.2
TraesCS3A03G1207400 Triticum aestivum HOM05M001760 ORTHO05M001888 4.4e-12 73.9 73 39.7
TraesCS3B03G1451600 Triticum aestivum HOM05M001760 ORTHO05M001888 4.4e-12 73.9 73 41.1
TRIDC3AG072530 Triticum dicoccoides HOM05M001760 ORTHO05M001888 4.4e-12 73.9 73 39.7
Bradi2g41817 Brachypodium distachyon HOM05M001760 ORTHO05M001888 7.6e-12 73.2 73 39.7
CBR_g24393 Chara braunii HOM05M001760 ORTHO05M001888 7.6e-12 73.2 73 41.1
Sobic.003G437900 Sorghum bicolor HOM05M001760 ORTHO05M001888 7.6e-12 73.2 73 46.6
TRIDC3AG072450 Triticum dicoccoides HOM05M001760 ORTHO05M001888 1.7e-11 72.0 73 39.7
TRIDC3BG083710 Triticum dicoccoides HOM05M001760 ORTHO05M001888 1.7e-11 72.0 73 39.7
Sspon.03G0038110-1C Saccharum spontaneum HOM05M001760 ORTHO05M001888 2.2e-11 71.6 73 46.6
Sspon.03G0038110-1P Saccharum spontaneum HOM05M001760 ORTHO05M001888 2.9e-11 71.2 73 45.2
TraesCS3A03G1205600 Triticum aestivum HOM05M001760 ORTHO05M001888 2.9e-11 71.2 73 39.7
AET3Gv21202700 Aegilops tauschii HOM05M001760 ORTHO05M001888 1.1e-10 69.3 73 38.4
Spipo10G0025700 Spirodela polyrhiza HOM05M001760 ORTHO05M001888 1.1e-10 69.3 76 38.2
DDU739G0404 Dioscorea dumetorum HOM05M001760 ORTHO05M001888 1.4e-10 68.9 73 37.0
Os10g0105700 Oryza sativa ssp. japonica HOM05M001760 ORTHO05M001888 1.4e-10 68.9 56 53.6
EJB05_18873 Eragrostis curvula HOM05M001760 ORTHO05M001888 2.4e-10 68.2 72 40.3
PH02Gene36949 Phyllostachys edulis HOM05M001760 ORTHO05M001888 2.4e-10 68.2 105 38.1
OsR498G1120128100.01 Oryza sativa ssp. indica HOM05M001760 ORTHO05M001888 3.2e-10 67.8 76 39.5
Sspon.04G0010640-1A Saccharum spontaneum HOM05M001760 ORTHO05M001888 4.2e-10 67.4 66 43.9
GWHGAZTO018915 Oryza alta HOM05M001760 ORTHO05M001888 7.1e-10 66.6 56 46.4
CBR_g40956 Chara braunii HOM05M001760 ORTHO05M001888 9.3e-10 66.2 78 41.0
Zm00007a00019610 Zea mays B104 HOM05M001760 ORTHO05M001888 1.2e-09 65.9 55 49.1
GWHGAORA046323 Cenchrus purpureus HOM05M001760 ORTHO05M001888 2.7e-09 64.7 73 37.0
GWHGAORA046353 Cenchrus purpureus HOM05M001760 ORTHO05M001888 2.7e-09 64.7 73 37.0
TraesCS3D03G1149800 Triticum aestivum HOM05M001760 ORTHO05M001888 2.7e-09 64.7 74 37.8
GWHGAORA030038 Cenchrus purpureus HOM05M001760 ORTHO05M001888 3.5e-09 64.3 73 38.4
TRIDC3BG083780 Triticum dicoccoides HOM05M001760 ORTHO05M001888 3.5e-09 64.3 58 43.1
GWHGASIY013772 Secale cereale HOM05M001760 ORTHO05M001888 6.0e-09 63.5 55 45.5
Asa5G00908 Allium sativum HOM05M001760 ORTHO05M001888 2.3e-08 61.6 74 36.5
OsKitaake04g014000 Oryza sativa Kitaake HOM05M001760 ORTHO05M001888 2.3e-08 61.6 55 45.5
OB11G19660 Oryza brachyantha HOM05M001760 ORTHO05M001888 5.1e-08 60.5 58 44.8
Spipo10G0026500 Spirodela polyrhiza HOM05M001760 ORTHO05M001888 1.1e-07 59.3 73 34.2
PH02Gene36950 Phyllostachys edulis HOM05M001760 ORTHO05M001888 1.5e-07 58.9 107 33.6
Os11g0473832 Oryza sativa ssp. japonica HOM05M001760 ORTHO05M001888 2.5e-07 58.2 55 45.5
Asa1G00248 Allium sativum HOM05M001760 ORTHO05M001888 1.3e-06 55.8 48 45.8
Spipo10G0026200 Spirodela polyrhiza HOM05M001760 ORTHO05M001888 1.6e-06 55.5 72 34.7
TRITD3Av1G277820 Triticum turgidum HOM05M001760 ORTHO05M001888 3.6e-06 54.3 43 46.5


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