Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g016670.3 Solanum lycopersicum HOM05M006109 ORTHO05M007895 3.8e-120 434.1 220 100.0
Glyma.20G018500 Glycine max HOM05M006109 ORTHO05M007895 2.1e-86 322.0 216 72.2
CDE02G0590 Ceratophyllum demersum HOM05M006109 ORTHO05M007895 3.0e-85 318.2 215 72.6
Glyma.07G220200 Glycine max HOM05M006109 ORTHO05M007895 6.7e-85 317.0 215 71.6
CDE06G1306 Ceratophyllum demersum HOM05M006109 ORTHO05M007895 1.5e-84 315.8 215 72.6
AT1G30070 Arabidopsis thaliana HOM05M006109 ORTHO05M007895 1.5e-81 305.8 220 68.2
Potri.011G085100 Populus trichocarpa HOM05M006109 ORTHO05M007895 2.0e-81 305.4 219 68.0
Ot_Chr3_g12565 Oropetium thomaeum HOM05M006109 ORTHO05M007895 1.4e-79 299.3 217 68.2
Dexi5B01G0027630 Digitaria exilis HOM05M006109 ORTHO05M007895 4.6e-78 294.3 215 67.9
Dexi5A01G0027440 Digitaria exilis HOM05M006109 ORTHO05M007895 6.1e-78 293.9 215 67.4
GWHGAORA044860 Cenchrus purpureus HOM05M006109 ORTHO05M007895 1.8e-77 292.4 216 67.6
evm.TU.AsparagusV1_01.431.V1.1 Asparagus officinalis HOM05M006109 ORTHO05M007895 5.1e-77 290.8 217 66.4
GWHGAORA031543 Cenchrus purpureus HOM05M006109 ORTHO05M007895 5.1e-77 290.8 216 66.7
CALSI_Maker00016278 Calamus simplicifolius HOM05M006109 ORTHO05M007895 6.7e-77 290.4 214 67.8
p5.00_sc00065_p0067 Elaeis guineensis HOM05M006109 ORTHO05M007895 6.7e-77 290.4 214 66.4
TraesCS3B03G0839700 Triticum aestivum HOM05M006109 ORTHO05M007895 1.5e-76 289.3 217 65.0
Seita.5G323600 Setaria italica HOM05M006109 ORTHO05M007895 3.3e-76 288.1 216 66.2
Sevir.5G327100 Setaria viridis HOM05M006109 ORTHO05M007895 3.3e-76 288.1 216 66.2
Ma06_g28590 Musa acuminata HOM05M006109 ORTHO05M007895 5.7e-76 287.3 215 65.1
Pahal.5G153300 Panicum hallii HOM05M006109 ORTHO05M007895 7.4e-76 287.0 215 64.7
Sspon.03G0006220-2C Saccharum spontaneum HOM05M006109 ORTHO05M007895 9.7e-76 286.6 216 64.4
Sspon.03G0006220-1A Saccharum spontaneum HOM05M006109 ORTHO05M007895 2.2e-75 285.4 216 63.4
GWHGASIY015991 Secale cereale HOM05M006109 ORTHO05M007895 2.2e-75 285.4 218 64.2
Ma07_g26770 Musa acuminata HOM05M006109 ORTHO05M007895 2.8e-75 285.0 217 65.9
OB01G40380 Oryza brachyantha HOM05M006109 ORTHO05M007895 2.8e-75 285.0 218 65.1
DDU314G0406 Dioscorea dumetorum HOM05M006109 ORTHO05M007895 1.4e-74 282.7 231 63.6
EJB05_16926 Eragrostis curvula HOM05M006109 ORTHO05M007895 1.8e-74 282.3 217 65.0
Misin05G278700 Miscanthus sinensis HOM05M006109 ORTHO05M007895 5.3e-74 280.8 215 62.3
Sobic.003G301000 Sorghum bicolor HOM05M006109 ORTHO05M007895 5.3e-74 280.8 217 64.5
HPP92_020290 Vanilla planifolia HOM05M006109 ORTHO05M007895 5.3e-74 280.8 216 64.8
ATR0730G012 Amborella trichopoda HOM05M006109 ORTHO05M007895 6.9e-74 280.4 213 63.4
TraesCS3A03G0733000 Triticum aestivum HOM05M006109 ORTHO05M007895 6.9e-74 280.4 216 63.0
TraesCS3D03G0676700 Triticum aestivum HOM05M006109 ORTHO05M007895 6.9e-74 280.4 217 63.6
TRIDC3AG043500 Triticum dicoccoides HOM05M006109 ORTHO05M007895 6.9e-74 280.4 216 63.0
CALSI_Maker00041872 Calamus simplicifolius HOM05M006109 ORTHO05M007895 1.2e-73 279.6 228 63.2
Misin06G267600 Miscanthus sinensis HOM05M006109 ORTHO05M007895 1.2e-73 279.6 216 63.9
Sspon.03G0006220-3D Saccharum spontaneum HOM05M006109 ORTHO05M007895 1.5e-73 279.3 221 62.0
TRIDC3BG049540 Triticum dicoccoides HOM05M006109 ORTHO05M007895 2.0e-73 278.9 208 64.9
GWHGAZTO057462 Oryza alta HOM05M006109 ORTHO05M007895 7.7e-73 276.9 220 62.7
TRITD3Av1G190600 Triticum turgidum HOM05M006109 ORTHO05M007895 1.0e-72 276.6 216 63.0
Zm00007a00047088 Zea mays B104 HOM05M006109 ORTHO05M007895 1.0e-72 276.6 221 61.5
SEGI_02039 Sequoiadendron giganteum HOM05M006109 ORTHO05M007895 2.9e-72 275.0 220 61.4
Asa8G04838 Allium sativum HOM05M006109 ORTHO05M007895 5.0e-72 274.2 216 66.7
Zm00001eb370650 Zea mays B73 HOM05M006109 ORTHO05M007895 5.0e-72 274.2 215 60.5
Horvu_MOREX_3H01G437500 Hordeum vulgare HOM05M006109 ORTHO05M007895 1.9e-71 272.3 217 61.8
OsKitaake01g331000 Oryza sativa Kitaake HOM05M006109 ORTHO05M007895 3.2e-71 271.6 227 59.9
Os01g0757500 Oryza sativa ssp. japonica HOM05M006109 ORTHO05M007895 3.2e-71 271.6 227 59.9
OsR498G0102022800.01 Oryza sativa ssp. indica HOM05M006109 ORTHO05M007895 4.2e-71 271.2 227 59.9
Bradi2g50300 Brachypodium distachyon HOM05M006109 ORTHO05M007895 9.4e-71 270.0 216 61.1
MBI10_g30420_MAGBIO Magnolia biondii HOM05M006109 ORTHO05M007895 2.3e-69 265.4 185 68.6
GWHGAZTO005128 Oryza alta HOM05M006109 ORTHO05M007895 3.0e-69 265.0 227 59.9
Zm00001eb152680 Zea mays B73 HOM05M006109 ORTHO05M007895 3.0e-69 265.0 215 60.5
TRITD3Bv1G173240 Triticum turgidum HOM05M006109 ORTHO05M007895 1.5e-68 262.7 217 61.8
Aco006747 Ananas comosus HOM05M006109 ORTHO05M007895 4.5e-65 251.1 175 69.1
evm.TU.AsparagusV1_05.1828.V1.1 Asparagus officinalis HOM05M006109 ORTHO05M007895 1.3e-64 249.6 167 71.3
Mapoly0148s0015 Marchantia polymorpha HOM05M006109 ORTHO05M007895 4.0e-61 238.0 239 51.5
Zosma01g31630 Zostera marina HOM05M006109 ORTHO05M007895 8.8e-61 236.9 209 56.9
Zjn_sc00040.1.g00240.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M006109 ORTHO05M007895 1.8e-58 229.2 219 56.2
Pp3c4_13920 Physcomitrium patens HOM05M006109 ORTHO05M007895 2.4e-58 228.8 219 54.8
Spipo0G0021500 Spirodela polyrhiza HOM05M006109 ORTHO05M007895 9.4e-55 216.9 180 61.7
Zm00007a00041472 Zea mays B104 HOM05M006109 ORTHO05M007895 6.1e-54 214.2 130 74.6
p5.00_sc00116_p0111 Elaeis guineensis HOM05M006109 ORTHO05M007895 2.2e-51 205.7 120 78.3
AagrBONN_evm.TU.Sc2ySwM_344.1819 Anthoceros agrestis HOM05M006109 ORTHO05M007895 4.1e-50 201.4 238 46.2
AET3Gv20695900 Aegilops tauschii HOM05M006109 ORTHO05M007895 2.2e-48 195.7 112 78.6
SMO364G0114 Selaginella moellendorffii HOM05M006109 ORTHO05M007895 7.2e-47 190.7 206 49.5
MBI16_g34289_MAGBIO Magnolia biondii HOM05M006109 ORTHO05M007895 4.0e-37 158.3 100 72.0
CBR_g22260 Chara braunii HOM05M006109 ORTHO05M007895 4.4e-36 154.8 252 36.1
Aco018086 Ananas comosus HOM05M006109 ORTHO05M007895 1.0e-32 143.7 161 47.2
Seita.4G150200 Setaria italica HOM05M006109 ORTHO05M007895 6.8e-13 77.8 47 68.1
Asa2G00026 Allium sativum HOM05M000401 ORTHO05M001358 8.9e-13 77.4 49 77.6
MBI18_g05573_MAGBIO Magnolia biondii HOM05M006109 ORTHO05M007895 1.2e-12 77.0 42 83.3
SMO353G0169 Selaginella moellendorffii HOM05M006109 ORTHO05M003003 1.2e-09 67.0 44 70.5
MBI18_g05572_MAGBIO Magnolia biondii HOM05M005989 ORTHO05M007749 8.6e-08 60.8 43 65.1
SMO364G0864 Selaginella moellendorffii HOM05M006109 ORTHO05M235231 1.1e-07 60.5 207 28.0
AT1G30060 Arabidopsis thaliana HOM05M014651 ORTHO05M000495 5.6e-07 58.2 27 100.0
Asa5G05340 Allium sativum HOM05M000401 ORTHO05M001358 7.3e-07 57.8 32 81.2
Seita.6G116000 Setaria italica HOM05M006109 ORTHO05M007895 4.7e-06 55.1 29 79.3

Aegilops tauschii (1 genes)
Allium sativum (3 genes)
Amborella trichopoda (1 genes)
Ananas comosus (2 genes)
Anthoceros agrestis (1 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (2 genes)
Cenchrus purpureus (2 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (2 genes)
Dioscorea dumetorum (1 genes)
Elaeis guineensis (2 genes)
Eragrostis curvula (1 genes)
Glycine max (2 genes)
Hordeum vulgare (1 genes)
Lolium perenne (0 genes)
Magnolia biondii (4 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (1 genes)
Oryza alta (2 genes)
Oryza brachyantha (1 genes)
Oryza sativa Kitaake (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Panicum hallii (1 genes)
Phyllostachys edulis (0 genes)
Physcomitrium patens (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (3 genes)
Secale cereale (1 genes)
Selaginella moellendorffii (3 genes)
Sequoiadendron giganteum (1 genes)
Setaria italica (3 genes)
Setaria viridis (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum dicoccoides (2 genes)
Triticum turgidum (2 genes)
Vanilla planifolia (1 genes)
Zea mays B73 (2 genes)
Zea mays B104 (2 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

Program Settings