Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g066640.3 Solanum lycopersicum HOM05M004740 ORTHO05M005371 5.7e-250 866.3 423 100.0
Potri.008G084100 Populus trichocarpa HOM05M004740 ORTHO05M005371 1.3e-169 599.4 427 67.4
Potri.010G172300 Populus trichocarpa HOM05M004740 ORTHO05M005371 6.4e-169 597.0 435 65.7
p5.00_sc00042_p0118 Elaeis guineensis HOM05M004740 ORTHO05M005371 4.5e-154 547.7 424 61.6
AT1G16290 Arabidopsis thaliana HOM05M004740 ORTHO05M005371 5.9e-154 547.4 419 61.3
Ma09_g31310 Musa acuminata HOM05M004740 ORTHO05M005371 1.0e-153 546.6 421 62.2
Horvu_MOREX_6H01G212100 Hordeum vulgare HOM05M004740 ORTHO05M005371 7.7e-146 520.4 419 59.7
V3.Lp_chr6_0G4984 Lolium perenne HOM05M004740 ORTHO05M005371 3.8e-145 518.1 420 59.5
Bradi3g05286 Brachypodium distachyon HOM05M004740 ORTHO05M005371 1.1e-144 516.5 421 59.1
TraesCS6A03G0382100 Triticum aestivum HOM05M004740 ORTHO05M005371 9.4e-144 513.5 419 59.4
Seita.1G071700 Setaria italica HOM05M004740 ORTHO05M005371 1.2e-143 513.1 421 58.9
Sevir.1G070300 Setaria viridis HOM05M004740 ORTHO05M005371 1.2e-143 513.1 421 58.9
OB02G14700 Oryza brachyantha HOM05M004740 ORTHO05M005371 3.6e-143 511.5 418 58.6
OsKitaake02g056500 Oryza sativa Kitaake HOM05M004740 ORTHO05M005371 7.9e-143 510.4 418 58.6
TraesCS6B03G0472200 Triticum aestivum HOM05M004740 ORTHO05M005371 7.9e-143 510.4 420 58.6
GWHGAORA058494 Cenchrus purpureus HOM05M004740 ORTHO05M005371 1.0e-142 510.0 422 58.5
Pahal.1G051700 Panicum hallii HOM05M004740 ORTHO05M005371 1.0e-142 510.0 420 57.9
TRIDC6AG022150 Triticum dicoccoides HOM05M004740 ORTHO05M005371 1.8e-142 509.2 419 59.2
TRIDC6BG027830 Triticum dicoccoides HOM05M004740 ORTHO05M005371 1.8e-142 509.2 419 58.7
PH02Gene09109 Phyllostachys edulis HOM05M004740 ORTHO05M005371 2.3e-142 508.8 419 58.9
GWHGASIY031505 Secale cereale HOM05M004740 ORTHO05M005371 2.3e-142 508.8 419 58.9
GWHGASIY031508 Secale cereale HOM05M004740 ORTHO05M005371 2.3e-142 508.8 419 58.9
Ot_Chr1_gn31353 Oropetium thomaeum HOM05M004740 ORTHO05M005371 6.7e-142 507.3 422 57.8
TRITD6Bv1G069790 Triticum turgidum HOM05M004740 ORTHO05M005371 6.7e-142 507.3 419 58.5
GWHGAORA015494 Cenchrus purpureus HOM05M004740 ORTHO05M005371 8.8e-142 506.9 422 58.1
Zm00001eb207280 Zea mays B73 HOM05M004740 ORTHO05M005371 1.5e-141 506.1 422 57.6
Sobic.004G056300 Sorghum bicolor HOM05M004740 ORTHO05M005371 3.3e-141 505.0 422 58.1
Zosma06g19010 Zostera marina HOM05M004740 ORTHO05M005371 3.3e-141 505.0 419 57.0
GWHGAZTO068484 Oryza alta HOM05M004740 ORTHO05M005371 1.0e-137 493.4 412 57.8
Zm00007a00007131 Zea mays B104 HOM05M004740 ORTHO05M005371 1.7e-137 492.7 417 57.1
Aco007468 Ananas comosus HOM05M004740 ORTHO05M005371 5.5e-136 487.6 417 59.7
Glyma.08G165100 Glycine max HOM05M004740 ORTHO05M005371 1.6e-135 486.1 427 56.2
evm.TU.AsparagusV1_06.122.V1.1 Asparagus officinalis HOM05M004740 ORTHO05M005371 6.1e-135 484.2 375 61.1
EJB05_24533 Eragrostis curvula HOM05M004740 ORTHO05M005371 3.7e-132 474.9 457 53.2
Sspon.04G0017370-2C Saccharum spontaneum HOM05M004740 ORTHO05M005371 3.7e-132 474.9 468 51.7
EJB05_24513 Eragrostis curvula HOM05M004740 ORTHO05M005371 4.8e-132 474.6 457 53.2
TraesCS6D03G0327600 Triticum aestivum HOM05M004740 ORTHO05M005371 4.8e-132 474.6 419 56.1
MBI02_g08257_MAGBIO Magnolia biondii HOM05M004740 ORTHO05M005371 4.2e-128 461.5 348 62.1
SMO196G0059 Selaginella moellendorffii HOM05M004740 ORTHO05M005371 2.7e-127 458.8 407 54.8
Spipo13G0023600 Spirodela polyrhiza HOM05M004740 ORTHO05M005371 1.7e-124 449.5 411 52.8
GWHGAZTO016741 Oryza alta HOM05M004740 ORTHO05M005371 9.1e-123 443.7 370 57.6
SMO137G0068 Selaginella moellendorffii HOM05M004740 ORTHO05M005371 7.7e-122 440.7 432 50.0
DDU479G0281 Dioscorea dumetorum HOM05M004740 ORTHO05M005371 1.0e-121 440.3 401 53.9
DDU732G0055 Dioscorea dumetorum HOM05M004740 ORTHO05M005371 1.0e-121 440.3 401 53.9
Asa8G01936 Allium sativum HOM05M004740 ORTHO05M005371 3.2e-120 435.3 376 58.0
Sspon.04G0017370-1A Saccharum spontaneum HOM05M004740 ORTHO05M005371 4.0e-118 428.3 411 52.8
Sspon.04G0017370-3D Saccharum spontaneum HOM05M004740 ORTHO05M005371 4.0e-118 428.3 411 52.8
Mapoly0008s0010 Marchantia polymorpha HOM05M004740 ORTHO05M005371 1.4e-110 403.3 446 45.5
AET6Gv20400700 Aegilops tauschii HOM05M004740 ORTHO05M005371 5.4e-107 391.3 331 57.4
Misin07G054800 Miscanthus sinensis HOM05M004740 ORTHO05M005371 3.5e-106 388.7 336 56.2
CBR_g32054 Chara braunii HOM05M004740 ORTHO05M005371 3.6e-103 378.6 427 44.3
AagrBONN_evm.TU.Sc2ySwM_117.1218 Anthoceros agrestis HOM05M004740 ORTHO05M005371 4.0e-102 375.2 415 45.8
OsR498G0203056600.01 Oryza sativa ssp. indica HOM05M004740 ORTHO05M005371 9.8e-101 370.5 312 57.7
Pp3c5_22590 Physcomitrium patens HOM05M004740 ORTHO05M005371 9.8e-101 370.5 493 40.6
Aco003685 Ananas comosus HOM05M004740 ORTHO05M005371 5.4e-99 364.8 350 55.7
Dexi1B01G0005390 Digitaria exilis HOM05M004740 ORTHO05M005371 1.4e-94 350.1 330 54.2
CALSI_Maker00020432 Calamus simplicifolius HOM05M004740 ORTHO05M005371 4.6e-90 335.1 295 55.6
MisinT435700 Miscanthus sinensis HOM05M004740 ORTHO05M005371 3.4e-85 318.9 298 53.4
SMO170G0006 Selaginella moellendorffii HOM05M004740 ORTHO05M005371 1.7e-81 306.6 392 41.6
TRITD6Av1G061000 Triticum turgidum HOM05M004740 ORTHO05M005371 2.4e-78 296.2 433 40.4
p5.00_sc00042_p0119 Elaeis guineensis HOM05M004740 ORTHO05M005371 6.9e-70 268.1 226 55.3
HPP92_016685 Vanilla planifolia HOM05M004740 ORTHO05M005371 9.3e-67 257.7 183 61.7
Zosma06g18970 Zostera marina HOM05M004740 ORTHO05M005371 1.2e-66 257.3 187 61.5
HPP92_016686 Vanilla planifolia HOM05M004740 ORTHO05M005371 3.4e-53 212.6 158 62.7
ATR0752G040 Amborella trichopoda HOM05M004740 ORTHO05M005371 6.0e-50 201.8 147 58.5
Zjn_sc00045.1.g03210.1.sm.mk Zoysia japonica ssp. nagirizaki HOM05M004740 ORTHO05M005371 1.5e-45 187.2 301 37.2
CALSI_Maker00020434 Calamus simplicifolius HOM05M004740 ORTHO05M005371 1.8e-41 173.7 118 64.4
ATR0752G225 Amborella trichopoda HOM05M004740 ORTHO05M005371 9.7e-40 167.9 125 61.6
SEGI_07478 Sequoiadendron giganteum HOM05M004740 ORTHO05M005371 2.7e-34 149.8 120 59.2
PH02Gene02909 Phyllostachys edulis HOM05M004740 ORTHO05M005371 1.4e-33 147.5 146 51.4
PH02Gene17134 Phyllostachys edulis HOM05M004740 ORTHO05M005371 1.4e-33 147.5 146 51.4
PH02Gene02595 Phyllostachys edulis HOM05M004740 ORTHO05M005371 1.9e-32 143.7 142 51.4
PH02Gene24951 Phyllostachys edulis HOM05M004740 ORTHO05M005371 1.9e-32 143.7 142 51.4
Aco014252 Ananas comosus HOM05M004740 ORTHO05M005371 1.8e-30 137.1 144 49.3
Dexi1A01G0005690 Digitaria exilis HOM05M004740 ORTHO05M005371 2.2e-28 130.2 89 62.9
Dexi1B01G0005380 Digitaria exilis HOM05M004740 ORTHO05M005371 2.2e-28 130.2 89 62.9
SEGI_03880 Sequoiadendron giganteum HOM05M004740 ORTHO05M005371 2.5e-27 126.7 101 56.4
SEGI_07505 Sequoiadendron giganteum HOM05M004740 ORTHO05M005371 3.6e-26 122.9 108 50.9
Zm00007a00049910 Zea mays B104 HOM05M004740 ORTHO05M005371 1.3e-23 114.4 148 44.6
Zm00001eb338130 Zea mays B73 HOM05M004740 ORTHO05M005371 4.1e-22 109.4 119 51.3
SEGI_02544 Sequoiadendron giganteum HOM05M004740 ORTHO05M005371 9.1e-22 108.2 72 65.3
PRCOL_00003152 Prasinoderma coloniale HOM05M004740 ORTHO05M005371 1.4e-14 84.3 175 30.9
ATR0752G173 Amborella trichopoda HOM05M004740 ORTHO05M005371 2.6e-13 80.1 53 66.0
Zm00001eb249880 Zea mays B73 HOM05M004740 ORTHO05M005371 1.1e-11 74.7 51 62.7
Zm00007a00016123 Zea mays B104 HOM05M000083 ORTHO05M005371 1.1e-11 74.7 51 62.7
Zm00007a00007832 Zea mays B104 HOM05M000083 ORTHO05M009533 8.0e-10 68.6 49 61.2
Zm00007a00014107 Zea mays B104 HOM05M000083 ORTHO05M009533 8.0e-10 68.6 49 61.2
HPP92_016689 Vanilla planifolia HOM05M004740 ORTHO05M005371 4.0e-09 66.2 37 70.3
Zm00001eb234590 Zea mays B73 HOM05M000083 ORTHO05M005371 5.2e-09 65.9 42 66.7
Zm00001eb316750 Zea mays B73 HOM05M000083 ORTHO05M001072 2.6e-08 63.5 42 64.3
Zm00007a00004595 Zea mays B104 HOM05M002044 ORTHO05M018928 1.3e-07 61.2 42 59.5
Zm00007a00037833 Zea mays B104 HOM05M002044 ORTHO05M018928 1.3e-07 61.2 42 59.5
Zm00007a00038677 Zea mays B104 HOM05M002044 ORTHO05M018928 1.3e-07 61.2 42 59.5

Aegilops tauschii (1 genes)
Allium sativum (1 genes)
Amborella trichopoda (3 genes)
Ananas comosus (3 genes)
Anthoceros agrestis (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (2 genes)
Cenchrus purpureus (2 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (1 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (3 genes)
Dioscorea dumetorum (2 genes)
Elaeis guineensis (2 genes)
Eragrostis curvula (2 genes)
Glycine max (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Magnolia biondii (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (1 genes)
Oryza alta (2 genes)
Oryza brachyantha (1 genes)
Oryza sativa Kitaake (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (0 genes)
Panicum hallii (1 genes)
Phyllostachys edulis (5 genes)
Physcomitrium patens (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (1 genes)
Saccharum spontaneum (3 genes)
Secale cereale (2 genes)
Selaginella moellendorffii (3 genes)
Sequoiadendron giganteum (4 genes)
Setaria italica (1 genes)
Setaria viridis (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum dicoccoides (2 genes)
Triticum turgidum (2 genes)
Vanilla planifolia (3 genes)
Zea mays B73 (5 genes)
Zea mays B104 (8 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

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