Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g065230.1 Solanum lycopersicum HOM05M001800 ORTHO05M002951 5.6e-99 363.6 197 100.0
Potri.001G361100 Populus trichocarpa HOM05M001800 ORTHO05M002951 1.5e-40 169.5 203 55.2
Potri.011G088400 Populus trichocarpa HOM05M001800 ORTHO05M002951 1.4e-38 162.9 203 55.2
Glyma.14G016700 Glycine max HOM05M001800 ORTHO05M002951 3.2e-38 161.8 203 57.6
MBI19_g06161_MAGBIO Magnolia biondii HOM05M001800 ORTHO05M002951 2.3e-36 155.6 204 52.9
Glyma.18G081900 Glycine max HOM05M001800 ORTHO05M002951 9.7e-35 150.2 204 55.9
Glyma.08G325300 Glycine max HOM05M001800 ORTHO05M002951 3.1e-33 145.2 204 54.4
Glyma.02G296900 Glycine max HOM05M001800 ORTHO05M002951 1.4e-28 129.8 200 49.5
MBI16_g11548_MAGBIO Magnolia biondii HOM05M001800 ORTHO05M002951 3.0e-28 128.6 204 49.5
Ma01_g16230 Musa acuminata HOM05M001800 ORTHO05M002951 4.8e-26 121.3 215 46.5
CALSI_Maker00047477 Calamus simplicifolius HOM05M001800 ORTHO05M002951 1.4e-25 119.8 204 46.6
CDE10G0054 Ceratophyllum demersum HOM05M001800 ORTHO05M002951 5.3e-25 117.9 204 47.5
p5.00_sc02285_p0001 Elaeis guineensis HOM05M001800 ORTHO05M002951 5.3e-25 117.9 206 44.7
p5.00_sc00137_p0014 Elaeis guineensis HOM05M001800 ORTHO05M002951 3.5e-24 115.2 204 46.1
p5.00_sc00137_p0015 Elaeis guineensis HOM05M001800 ORTHO05M002951 3.5e-24 115.2 204 46.1
CDE10G0274 Ceratophyllum demersum HOM05M001800 ORTHO05M002951 4.5e-24 114.8 205 47.8
Aco012280 Ananas comosus HOM05M001800 ORTHO05M002951 3.8e-23 111.7 202 44.6
Ma06_g26680 Musa acuminata HOM05M001800 ORTHO05M002951 3.2e-22 108.6 211 42.7
PH02Gene39960 Phyllostachys edulis HOM05M001800 ORTHO05M002951 1.2e-21 106.7 201 41.3
Misin01G436600 Miscanthus sinensis HOM05M001800 ORTHO05M002951 3.6e-21 105.1 152 50.0
AT5G55530 Arabidopsis thaliana HOM05M001800 ORTHO05M002951 6.1e-21 104.4 198 43.4
Misin02G446200 Miscanthus sinensis HOM05M001800 ORTHO05M002951 6.1e-21 104.4 152 49.3
Ma07_g27320 Musa acuminata HOM05M001800 ORTHO05M002951 6.1e-21 104.4 206 41.7
Sobic.001G471900 Sorghum bicolor HOM05M001800 ORTHO05M002951 6.1e-21 104.4 153 49.0
DDU409G0007 Dioscorea dumetorum HOM05M001800 ORTHO05M002951 8.0e-21 104.0 221 41.2
AT1G50570 Arabidopsis thaliana HOM05M001800 ORTHO05M002951 2.3e-20 102.4 202 46.0
MBI19_g42627_MAGBIO Magnolia biondii HOM05M001800 ORTHO05M002951 2.3e-20 102.4 73 76.7
Zm00001eb401160 Zea mays B73 HOM05M001800 ORTHO05M002951 5.2e-20 101.3 201 42.8
Zm00007a00005639 Zea mays B104 HOM05M001800 ORTHO05M002951 5.2e-20 101.3 201 42.8
Horvu_MOREX_4H01G409200 Hordeum vulgare HOM05M001800 ORTHO05M002951 8.8e-20 100.5 208 42.8
HPP92_009574 Vanilla planifolia HOM05M001800 ORTHO05M002951 5.7e-19 97.8 204 39.7
Zm00001eb008290 Zea mays B73 HOM05M001800 ORTHO05M002951 7.5e-19 97.4 153 47.7
Zm00001eb008270 Zea mays B73 HOM05M001800 ORTHO05M002951 9.7e-19 97.1 153 47.7
Zm00007a00028733 Zea mays B104 HOM05M001800 ORTHO05M002951 9.7e-19 97.1 153 47.7
CALSI_Maker00026788 Calamus simplicifolius HOM05M001800 ORTHO05M002951 1.3e-18 96.7 200 42.5
TraesCS4B03G0706700 Triticum aestivum HOM05M001800 ORTHO05M002951 1.3e-18 96.7 205 40.5
TRIDC4BG046110 Triticum dicoccoides HOM05M001800 ORTHO05M002951 1.3e-18 96.7 205 41.0
Ma04_g06990 Musa acuminata HOM05M001800 ORTHO05M002951 1.7e-18 96.3 200 41.0
Aco020752 Ananas comosus HOM05M001800 ORTHO05M002951 3.7e-18 95.1 151 46.4
TraesCS4D03G0632000 Triticum aestivum HOM05M001800 ORTHO05M002951 3.7e-18 95.1 165 44.2
TRITD4Bv1G158360 Triticum turgidum HOM05M001800 ORTHO05M002951 1.4e-17 93.2 148 47.3
TRITD4Av1G016310 Triticum turgidum HOM05M001800 ORTHO05M002951 1.8e-17 92.8 148 48.0
AET4Gv20654600 Aegilops tauschii HOM05M001800 ORTHO05M002951 2.4e-17 92.4 205 40.5
PH02Gene17922 Phyllostachys edulis HOM05M001800 ORTHO05M002951 3.1e-17 92.0 223 39.5
PH02Gene05430 Phyllostachys edulis HOM05M001800 ORTHO05M002951 9.1e-17 90.5 197 38.6
GWHGASIY037959 Secale cereale HOM05M001800 ORTHO05M002951 1.2e-16 90.1 202 43.6
GWHGAZTO022572 Oryza alta HOM05M001800 ORTHO05M002951 1.6e-16 89.7 206 39.3
PH02Gene13308 Phyllostachys edulis HOM05M001800 ORTHO05M002951 1.6e-16 89.7 226 38.9
OsKitaake03g072700 Oryza sativa Kitaake HOM05M001800 ORTHO05M002951 2.0e-16 89.4 206 38.3
OsR498G0305379000.01 Oryza sativa ssp. indica HOM05M001800 ORTHO05M002951 2.0e-16 89.4 206 38.3
Os03g0194100 Oryza sativa ssp. japonica HOM05M001800 ORTHO05M002951 2.0e-16 89.4 206 38.3
TraesCS4A03G0086700 Triticum aestivum HOM05M001800 ORTHO05M002951 3.5e-16 88.6 202 40.1
TRIDC4AG006190 Triticum dicoccoides HOM05M001800 ORTHO05M002951 3.5e-16 88.6 202 40.1
V3.Lp_chr2_0G5968 Lolium perenne HOM05M001800 ORTHO05M002951 5.9e-16 87.8 234 36.8
ATR0712G073 Amborella trichopoda HOM05M001800 ORTHO05M002951 7.7e-16 87.4 205 40.5
SEGI_36403 Sequoiadendron giganteum HOM05M001800 ORTHO05M002951 1.0e-15 87.0 185 40.5
Solyc07g048040.1 Solanum lycopersicum HOM05M001800 ORTHO05M002951 1.0e-15 87.0 202 40.1
Ot_Chr7_g16675 Oropetium thomaeum HOM05M001800 ORTHO05M002951 2.2e-15 85.9 233 39.1
Sspon.01G0035540-1B Saccharum spontaneum HOM05M001800 ORTHO05M002951 2.2e-15 85.9 136 44.9
GWHGAORA054890 Cenchrus purpureus HOM05M001800 ORTHO05M002951 3.8e-15 85.1 153 45.8
GWHGAORA054908 Cenchrus purpureus HOM05M001800 ORTHO05M002951 3.8e-15 85.1 153 45.8
SEGI_15819 Sequoiadendron giganteum HOM05M001800 ORTHO05M002951 5.0e-15 84.7 260 38.1
Ot_Chr4_g00366 Oropetium thomaeum HOM05M001800 ORTHO05M002951 6.5e-15 84.3 209 40.2
V3.Lp_chr4_0G24652 Lolium perenne HOM05M001800 ORTHO05M002951 8.5e-15 84.0 206 39.3
TraesCS2A03G0397300 Triticum aestivum HOM05M001800 ORTHO05M002951 1.1e-14 83.6 231 35.5
TRIDC2AG024400 Triticum dicoccoides HOM05M001800 ORTHO05M002951 1.1e-14 83.6 231 35.5
TRITD2Av1G067080 Triticum turgidum HOM05M001800 ORTHO05M002951 1.1e-14 83.6 231 35.5
Spipo24G0012000 Spirodela polyrhiza HOM05M001800 ORTHO05M002951 1.5e-14 83.2 74 62.2
GWHGAORA026554 Cenchrus purpureus HOM05M001800 ORTHO05M002951 2.5e-14 82.4 233 36.5
GWHGAZTO044777 Oryza alta HOM05M001800 ORTHO05M002951 3.2e-14 82.0 230 36.1
OB03G17020 Oryza brachyantha HOM05M001800 ORTHO05M002951 4.2e-14 81.6 210 38.1
GWHGASIY007566 Secale cereale HOM05M001800 ORTHO05M002951 4.2e-14 81.6 231 34.2
Bradi1g23257 Brachypodium distachyon HOM05M001800 ORTHO05M002951 9.4e-14 80.5 237 35.0
Spipo2G0074800 Spirodela polyrhiza HOM05M001800 ORTHO05M002951 1.2e-13 80.1 144 42.4
Seita.9G507300 Setaria italica HOM05M001800 ORTHO05M002951 1.6e-13 79.7 101 51.5
Bradi1g71592 Brachypodium distachyon HOM05M001800 ORTHO05M002951 2.1e-13 79.3 181 39.2
Misin04G336600 Miscanthus sinensis HOM05M001800 ORTHO05M002951 2.7e-13 79.0 233 35.2
Sobic.002G355500 Sorghum bicolor HOM05M001800 ORTHO05M002951 2.7e-13 79.0 238 35.3
SEGI_15344 Sequoiadendron giganteum HOM05M001800 ORTHO05M002951 3.6e-13 78.6 241 33.6
AET2Gv20393000 Aegilops tauschii HOM05M001800 ORTHO05M002951 4.7e-13 78.2 231 33.8
CALSI_Maker00025625 Calamus simplicifolius HOM05M001800 ORTHO05M010100 4.7e-13 78.2 200 37.5
GWHGAZTO000922 Oryza alta HOM05M001800 ORTHO05M002951 4.7e-13 78.2 202 37.1
TraesCS2D03G0410700 Triticum aestivum HOM05M001800 ORTHO05M002951 4.7e-13 78.2 231 33.8
Zm00001eb107970 Zea mays B73 HOM05M001800 ORTHO05M002951 4.7e-13 78.2 229 34.9
Zm00007a00042629 Zea mays B104 HOM05M001800 ORTHO05M002951 6.1e-13 77.8 229 35.4
Misin03G308500 Miscanthus sinensis HOM05M001800 ORTHO05M002951 8.0e-13 77.4 234 36.3
Pahal.9G569500 Panicum hallii HOM05M001800 ORTHO05M002951 8.0e-13 77.4 154 42.2
Sevir.9G511400 Setaria viridis HOM05M001800 ORTHO05M002951 8.0e-13 77.4 155 41.3
Pahal.2G428700 Panicum hallii HOM05M001800 ORTHO05M002951 1.4e-12 76.6 235 36.6
Horvu_MOREX_2H01G242400 Hordeum vulgare HOM05M001800 ORTHO05M002951 2.3e-12 75.9 238 33.6
Zm00001eb325820 Zea mays B73 HOM05M001800 ORTHO05M002951 2.3e-12 75.9 235 35.7
Zm00007a00045477 Zea mays B104 HOM05M001800 ORTHO05M002951 2.3e-12 75.9 235 35.7
Solyc11g064840.1 Solanum lycopersicum HOM05M001800 ORTHO05M002951 3.0e-12 75.5 137 44.5
Zosma06g22410 Zostera marina HOM05M001800 ORTHO05M002951 1.2e-11 73.6 186 33.9
Seita.2G370400 Setaria italica HOM05M001800 ORTHO05M002951 1.5e-11 73.2 235 34.9
Sevir.2G381400 Setaria viridis HOM05M001800 ORTHO05M002951 1.5e-11 73.2 235 34.9
DDU009G0070 Dioscorea dumetorum HOM05M001800 ORTHO05M010100 2.0e-11 72.8 93 51.6
Zjn_sc00003.1.g09570.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M001800 ORTHO05M002951 2.0e-11 72.8 203 37.9
DDU256G0344 Dioscorea dumetorum HOM05M001800 ORTHO05M002951 2.6e-11 72.4 93 51.6
ATR0745G036 Amborella trichopoda HOM05M001800 ORTHO05M002951 4.4e-11 71.6 198 33.8
Potri.009G070400 Populus trichocarpa HOM05M001800 ORTHO05M010100 4.4e-11 71.6 106 45.3
p5.00_sc00022_p0061 Elaeis guineensis HOM05M001800 ORTHO05M010100 5.7e-11 71.2 210 36.7
Aco019907 Ananas comosus HOM05M001800 ORTHO05M010100 9.8e-11 70.5 97 47.4
OsKitaake07g208400 Oryza sativa Kitaake HOM05M001800 ORTHO05M002951 1.7e-10 69.7 245 33.1
Os07g0585000 Oryza sativa ssp. japonica HOM05M001800 ORTHO05M002951 1.7e-10 69.7 245 33.1
Potri.001G275800 Populus trichocarpa HOM05M001800 ORTHO05M010100 2.2e-10 69.3 106 44.3
EJB05_11537 Eragrostis curvula HOM05M001800 ORTHO05M002951 2.8e-10 68.9 248 34.7
p5.00_sc00032_p0049 Elaeis guineensis HOM05M001800 ORTHO05M010100 3.7e-10 68.6 238 32.8
CALSI_Maker00043504 Calamus simplicifolius HOM05M001800 ORTHO05M010100 4.8e-10 68.2 86 50.0
Glyma.14G034900 Glycine max HOM05M001800 ORTHO05M010100 6.3e-10 67.8 137 40.9
TraesCS2B03G0522200 Triticum aestivum HOM05M001800 ORTHO05M002951 8.3e-10 67.4 234 32.1
TRIDC2BG028700 Triticum dicoccoides HOM05M001800 ORTHO05M002951 8.3e-10 67.4 234 32.1
Zjn_sc00044.1.g00170.1.sm.mk Zoysia japonica ssp. nagirizaki HOM05M001800 ORTHO05M002951 1.1e-09 67.0 231 34.2
Asa2G06364 Allium sativum HOM05M001800 ORTHO05M002951 1.4e-09 66.6 125 44.0
Glyma.20G037600 Glycine max HOM05M001800 ORTHO05M010100 1.4e-09 66.6 134 41.0
GWHGAZTO092291 Oryza alta HOM05M001800 ORTHO05M002951 1.4e-09 66.6 240 32.9
SMO351G0645 Selaginella moellendorffii HOM05M001800 ORTHO05M002951 1.8e-09 66.2 73 53.4
Dexi2B01G0030410 Digitaria exilis HOM05M001800 ORTHO05M002951 2.4e-09 65.9 235 37.9
DDU394G0024 Dioscorea dumetorum HOM05M001800 ORTHO05M002951 9.1e-09 63.9 213 31.0
DDU801G0465 Dioscorea dumetorum HOM05M001800 ORTHO05M002951 9.1e-09 63.9 213 31.0
Glyma.07G230700 Glycine max HOM05M001800 ORTHO05M010100 9.1e-09 63.9 239 31.8
GWHGAZTO059306 Oryza alta HOM05M001800 ORTHO05M010100 9.1e-09 63.9 161 36.6
EJB05_50499 Eragrostis curvula HOM05M001800 ORTHO05M002951 1.2e-08 63.5 207 36.2
MBI13_g27801_MAGBIO Magnolia biondii HOM05M001800 ORTHO05M002951 1.2e-08 63.5 205 33.7
TRITD2Bv1G076360 Triticum turgidum HOM05M001800 ORTHO05M002951 1.6e-08 63.2 234 31.2
PH02Gene21060 Phyllostachys edulis HOM05M001800 ORTHO05M010100 2.0e-08 62.8 150 34.7
OsKitaake01g475400 Oryza sativa Kitaake HOM05M001800 ORTHO05M010100 4.5e-08 61.6 129 37.2
OsR498G0102712800.01 Oryza sativa ssp. indica HOM05M001800 ORTHO05M010100 4.5e-08 61.6 129 37.2
Os01g0953500 Oryza sativa ssp. japonica HOM05M001800 ORTHO05M010100 4.5e-08 61.6 129 37.2
Zosma01g11140 Zostera marina HOM05M001800 ORTHO05M002951 1.0e-07 60.5 119 37.0
GWHGAORA006460 Cenchrus purpureus HOM05M001800 ORTHO05M002951 1.3e-07 60.1 238 31.9
AT5G12300 Arabidopsis thaliana HOM05M001800 ORTHO05M002951 1.7e-07 59.7 83 45.8
GWHGAZTO006971 Oryza alta HOM05M001800 ORTHO05M010100 1.7e-07 59.7 161 36.0
MBI19_g42626_MAGBIO Magnolia biondii HOM05M001800 ORTHO05M002951 2.3e-07 59.3 78 47.4
V3.Lp_chr3_0G24506 Lolium perenne HOM05M001800 ORTHO05M010100 2.9e-07 58.9 141 32.6
Sobic.003G428900 Sorghum bicolor HOM05M001800 ORTHO05M010100 5.0e-07 58.2 130 33.8
Misin06G399000 Miscanthus sinensis HOM05M001800 ORTHO05M010100 6.6e-07 57.8 81 44.4
Sevir.5G462500 Setaria viridis HOM05M001800 ORTHO05M010100 6.6e-07 57.8 127 33.9
Zjn_sc00009.1.g00840.1.sm.mk Zoysia japonica ssp. nagirizaki HOM05M001800 ORTHO05M010100 8.6e-07 57.4 101 37.6
AET3Gv21142400 Aegilops tauschii HOM05M001800 ORTHO05M010100 1.5e-06 56.6 132 34.8
Bradi2g61060 Brachypodium distachyon HOM05M001800 ORTHO05M010100 1.5e-06 56.6 146 34.9
Glyma.02G279900 Glycine max HOM05M001800 ORTHO05M010100 1.5e-06 56.6 250 30.8
Ma06_g26660 Musa acuminata HOM05M001800 ORTHO05M002951 1.5e-06 56.6 61 57.4
OB07G25960 Oryza brachyantha HOM05M001800 ORTHO05M002951 1.5e-06 56.6 233 32.6
TraesCS3D03G1094700 Triticum aestivum HOM05M001800 ORTHO05M010100 1.5e-06 56.6 132 34.8
TRIDC3AG070030 Triticum dicoccoides HOM05M001800 ORTHO05M010100 1.5e-06 56.6 146 31.5
Seita.5G455800 Setaria italica HOM05M001800 ORTHO05M010100 1.9e-06 56.2 127 33.1
GWHGASIY034921 Secale cereale HOM05M001800 ORTHO05M010100 2.5e-06 55.8 146 34.2
TraesCS3A03G1148600 Triticum aestivum HOM05M001800 ORTHO05M010100 2.5e-06 55.8 146 32.9
TRITD3Av1G270080 Triticum turgidum HOM05M001800 ORTHO05M010100 2.5e-06 55.8 146 32.9
TRIDC3BG079360 Triticum dicoccoides HOM05M001800 ORTHO05M010100 3.3e-06 55.5 132 34.1
GWHGAORA049381 Cenchrus purpureus HOM05M001800 ORTHO05M004540 5.5e-06 54.7 178 34.8
TraesCS3B03G1368900 Triticum aestivum HOM05M001800 ORTHO05M010100 5.5e-06 54.7 132 34.1
TRITD3Bv1G265070 Triticum turgidum HOM05M001800 ORTHO05M010100 5.5e-06 54.7 132 34.1

Aegilops tauschii (3 genes)
Allium sativum (1 genes)
Amborella trichopoda (2 genes)
Ananas comosus (3 genes)
Anthoceros agrestis (0 genes)
Arabidopsis thaliana (3 genes)
Asparagus officinalis (0 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (4 genes)
Cenchrus purpureus (5 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (1 genes)
Dioscorea dumetorum (5 genes)
Elaeis guineensis (5 genes)
Eragrostis curvula (2 genes)
Glycine max (8 genes)
Hordeum vulgare (2 genes)
Lolium perenne (3 genes)
Magnolia biondii (5 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (5 genes)
Musa acuminata (5 genes)
Oropetium thomaeum (2 genes)
Oryza alta (6 genes)
Oryza brachyantha (2 genes)
Oryza sativa Kitaake (3 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (3 genes)
Panicum hallii (2 genes)
Phyllostachys edulis (5 genes)
Physcomitrium patens (0 genes)
Populus trichocarpa (4 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (1 genes)
Secale cereale (3 genes)
Selaginella moellendorffii (1 genes)
Sequoiadendron giganteum (3 genes)
Setaria italica (3 genes)
Setaria viridis (3 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (9 genes)
Triticum dicoccoides (6 genes)
Triticum turgidum (6 genes)
Vanilla planifolia (1 genes)
Zea mays B73 (5 genes)
Zea mays B104 (4 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (3 genes)

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