Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g015980.4 Solanum lycopersicum HOM05M004501 ORTHO05M005306 1.5e-300 1034.6 525 100.0
Potri.018G138206 Populus trichocarpa HOM05M004501 ORTHO05M005306 9.7e-183 643.3 559 60.5
Glyma.12G049000 Glycine max HOM05M004501 ORTHO05M005306 9.8e-175 616.7 493 64.1
CALSI_Maker00042998 Calamus simplicifolius HOM05M004501 ORTHO05M005306 4.1e-157 558.1 526 57.2
evm.TU.AsparagusV1_04.2371.V1.1 Asparagus officinalis HOM05M004501 ORTHO05M005306 7.0e-157 557.4 522 57.3
MBI11_g07424_MAGBIO Magnolia biondii HOM05M004501 ORTHO05M005306 3.5e-156 555.1 495 59.0
DDU469G0106 Dioscorea dumetorum HOM05M004501 ORTHO05M005306 3.6e-153 545.0 529 56.1
OsKitaake03g413600 Oryza sativa Kitaake HOM05M004501 ORTHO05M005306 4.4e-151 538.1 495 56.8
OsR498G0307367000.01 Oryza sativa ssp. indica HOM05M004501 ORTHO05M005306 1.7e-150 536.2 495 56.6
OB03G47840 Oryza brachyantha HOM05M004501 ORTHO05M005306 3.7e-150 535.0 499 55.5
Sspon.01G0032700-1P Saccharum spontaneum HOM05M004501 ORTHO05M005306 8.3e-150 533.9 502 55.2
Sspon.01G0032700-2P Saccharum spontaneum HOM05M004501 ORTHO05M005306 8.3e-150 533.9 502 55.2
Spipo9G0068800 Spirodela polyrhiza HOM05M004501 ORTHO05M005306 7.0e-149 530.8 492 57.9
Sevir.9G012700 Setaria viridis HOM05M004501 ORTHO05M005306 1.6e-148 529.6 513 54.8
Misin16G020400 Miscanthus sinensis HOM05M004501 ORTHO05M005306 2.7e-148 528.9 501 54.5
PH02Gene08369 Phyllostachys edulis HOM05M004501 ORTHO05M005306 7.8e-148 527.3 537 52.9
V3.Lp_scaffold_6358G2 Lolium perenne HOM05M004501 ORTHO05M005306 1.0e-147 526.9 507 54.8
Sspon.01G0032700-3D Saccharum spontaneum HOM05M004501 ORTHO05M005306 1.0e-147 526.9 504 54.8
Seita.9G012500 Setaria italica HOM05M004501 ORTHO05M005306 1.0e-147 526.9 513 54.6
Pahal.9G011900 Panicum hallii HOM05M004501 ORTHO05M005306 2.3e-147 525.8 502 55.0
GWHGASIY036952 Secale cereale HOM05M004501 ORTHO05M005306 6.6e-147 524.2 503 54.5
Sobic.001G013900 Sorghum bicolor HOM05M004501 ORTHO05M005306 6.6e-147 524.2 502 54.0
V3.Lp_chr4_0G1016 Lolium perenne HOM05M004501 ORTHO05M005306 2.5e-146 522.3 505 54.7
Aco006635 Ananas comosus HOM05M004501 ORTHO05M005306 3.3e-146 521.9 499 55.5
GWHGAORA020559 Cenchrus purpureus HOM05M004501 ORTHO05M005306 3.3e-146 521.9 510 54.5
TRITD5Bv1G245760 Triticum turgidum HOM05M004501 ORTHO05M005306 7.3e-146 520.8 488 55.7
TRIDC5BG079880 Triticum dicoccoides HOM05M004501 ORTHO05M005306 2.1e-145 519.2 503 54.5
TraesCS4A03G0838500 Triticum aestivum HOM05M004501 ORTHO05M005306 2.8e-145 518.8 486 55.6
EJB05_57792 Eragrostis curvula HOM05M004501 ORTHO05M005306 3.6e-145 518.5 486 55.8
Horvu_MOREX_5H01G722600 Hordeum vulgare HOM05M004501 ORTHO05M005306 4.7e-145 518.1 486 55.8
TRITD4Av1G214740 Triticum turgidum HOM05M004501 ORTHO05M005306 1.1e-144 516.9 486 55.6
Bradi1g01810 Brachypodium distachyon HOM05M004501 ORTHO05M005306 1.4e-144 516.5 502 54.2
AET5Gv21185900 Aegilops tauschii HOM05M004501 ORTHO05M005306 1.8e-144 516.2 503 54.3
TraesCS5B03G1304500 Triticum aestivum HOM05M004501 ORTHO05M005306 2.3e-144 515.8 488 55.3
EJB05_03586 Eragrostis curvula HOM05M004501 ORTHO05M005306 3.1e-144 515.4 484 54.8
HPP92_003174 Vanilla planifolia HOM05M004501 ORTHO05M005306 4.0e-144 515.0 515 55.5
TraesCS5D03G1166300 Triticum aestivum HOM05M004501 ORTHO05M005306 1.3e-142 510.0 501 53.9
Ot_Chr4_g25892 Oropetium thomaeum HOM05M004501 ORTHO05M002424 3.7e-142 508.4 516 52.7
Potri.018G145600 Populus trichocarpa HOM05M004501 ORTHO05M005306 9.2e-141 503.8 417 61.2
ATR1147G022 Amborella trichopoda HOM05M004501 ORTHO05M005306 2.1e-140 502.7 490 53.7
Ma10_g16970 Musa acuminata HOM05M004501 ORTHO05M005306 2.5e-138 495.7 484 55.4
SEGI_12293 Sequoiadendron giganteum HOM05M004501 ORTHO05M005306 1.2e-135 486.9 498 52.8
Sspon.01G0032700-2B Saccharum spontaneum HOM05M004501 ORTHO05M005306 1.3e-134 483.4 446 56.3
EJB05_03603 Eragrostis curvula HOM05M004501 ORTHO05M005306 1.7e-131 473.0 452 55.8
GWHGAORA050260 Cenchrus purpureus HOM05M004501 ORTHO05M005306 6.2e-129 464.5 513 49.9
CDE06G1948 Ceratophyllum demersum HOM05M004501 ORTHO05M005306 6.2e-129 464.5 452 53.1
Sspon.01G0032700-1A Saccharum spontaneum HOM05M004501 ORTHO05M005306 4.4e-127 458.4 450 54.0
Misin07G534100 Miscanthus sinensis HOM05M004501 ORTHO05M005306 1.7e-126 456.4 500 49.8
AagrBONN_evm.TU.Sc2ySwM_117.1864 Anthoceros agrestis HOM05M004501 ORTHO05M005306 2.0e-119 433.0 506 46.6
p5.00_sc00091_p0007 Elaeis guineensis HOM05M004501 ORTHO05M005306 4.4e-119 431.8 392 57.9
Pp3c15_21680 Physcomitrium patens HOM05M004501 ORTHO05M005306 4.9e-118 428.3 492 47.8
Mapoly0055s0075 Marchantia polymorpha HOM05M004501 ORTHO05M005306 3.0e-115 419.1 508 46.1
Asa5G03552 Allium sativum HOM05M004501 ORTHO05M005306 3.4e-111 405.6 393 56.2
Zm00001eb064440 Zea mays B73 HOM05M004501 ORTHO05M005306 5.8e-111 404.8 392 53.6
Dexi9B01G0001160 Digitaria exilis HOM05M004501 ORTHO05M005306 2.1e-108 396.4 394 53.6
GWHGAZTO077451 Oryza alta HOM05M004501 ORTHO05M005306 2.7e-108 396.0 393 54.7
Dexi9A01G0001260 Digitaria exilis HOM05M004501 ORTHO05M005306 4.6e-108 395.2 394 53.6
Misin01G007400 Miscanthus sinensis HOM05M004501 ORTHO05M005306 3.9e-107 392.1 394 52.5
GWHGAZTO027595 Oryza alta HOM05M004501 ORTHO05M005306 1.3e-94 350.5 392 51.3
CBR_g2798 Chara braunii HOM05M004501 ORTHO05M005306 3.3e-90 335.9 641 34.8
CDE06G1657 Ceratophyllum demersum HOM05M004501 ORTHO05M005306 2.9e-86 322.8 424 44.1
CALSI_Maker00012870 Calamus simplicifolius HOM05M004501 ORTHO05M005306 8.5e-86 321.2 282 61.7
Solyc07g016050.3 Solanum lycopersicum HOM05M004501 ORTHO05M005306 2.2e-78 296.6 343 46.9
V3.Lp_chr4_0G1014 Lolium perenne HOM05M004501 ORTHO05M005306 1.4e-75 287.3 377 46.7
Solyc07g016030.1 Solanum lycopersicum HOM05M004501 ORTHO05M005306 3.7e-73 279.3 312 48.1
Asa3G00355 Allium sativum HOM05M004501 ORTHO05M005306 1.2e-63 247.7 285 50.2
Cre02.g105150 Chlamydomonas reinhardtii HOM05M004501 ORTHO05M005306 7.2e-61 238.4 620 31.6
Solyc07g016080.4 Solanum lycopersicum HOM05M004501 ORTHO05M005306 1.4e-59 234.2 240 50.0
PRCOL_00000420 Prasinoderma coloniale HOM05M004501 ORTHO05M005306 5.2e-51 205.7 500 33.0
Zm00007a00039445 Zea mays B104 HOM05M004501 ORTHO05M005306 6.8e-51 205.3 246 48.0
Zm00007a00014221 Zea mays B104 HOM05M004501 ORTHO05M005306 1.3e-49 201.1 246 47.2
Solyc07g016020.1 Solanum lycopersicum HOM05M004501 ORTHO05M005306 1.2e-47 194.5 147 63.9
Asa2G00639 Allium sativum HOM05M004501 ORTHO05M005306 2.7e-47 193.4 254 44.9
TRIDC4AG051050 Triticum dicoccoides HOM05M004501 ORTHO05M005306 7.7e-47 191.8 196 50.0
Solyc07g016040.3 Solanum lycopersicum HOM05M004501 ORTHO05M005306 5.2e-43 179.1 118 72.0
Asa7G04783 Allium sativum HOM05M004501 ORTHO05M005306 1.3e-41 174.5 366 32.2
Solyc07g032590.1 Solanum lycopersicum HOM05M004501 ORTHO05M005306 3.7e-41 172.9 120 83.3
Aco023431 Ananas comosus HOM05M004501 ORTHO05M005306 8.0e-36 155.2 142 57.0
Asa7G01335 Allium sativum HOM05M004501 ORTHO05M005306 3.0e-30 136.7 212 40.1
Asa0G04724 Allium sativum HOM05M004501 ORTHO05M005306 3.3e-21 106.7 97 54.6
Asa0G04641 Allium sativum HOM05M004501 ORTHO05M005306 2.8e-20 103.6 77 61.0
Asa3G04159 Allium sativum HOM05M004501 ORTHO05M005306 2.8e-20 103.6 77 61.0
AET5Gv21186400 Aegilops tauschii HOM05M004501 ORTHO05M005306 8.1e-20 102.1 92 59.8
Asa0G04642 Allium sativum HOM05M004501 ORTHO05M005306 1.6e-15 87.8 95 52.6
Asa3G04160 Allium sativum HOM05M004501 ORTHO05M005306 1.6e-15 87.8 95 52.6
GWHGAZTO027596 Oryza alta HOM05M004501 ORTHO05M005306 1.6e-15 87.8 75 56.0
Zjn_sc00013.1.g09950.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM05M004501 ORTHO05M005306 7.8e-15 85.5 52 69.2
Ma10_g16960 Musa acuminata HOM05M004501 ORTHO05M005306 2.9e-09 67.0 45 73.3

Aegilops tauschii (2 genes)
Allium sativum (10 genes)
Amborella trichopoda (1 genes)
Ananas comosus (2 genes)
Anthoceros agrestis (1 genes)
Arabidopsis thaliana (0 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (2 genes)
Cenchrus purpureus (2 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chlamydomonas reinhardtii (1 genes)
Digitaria exilis (2 genes)
Dioscorea dumetorum (1 genes)
Elaeis guineensis (1 genes)
Eragrostis curvula (3 genes)
Glycine max (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (3 genes)
Magnolia biondii (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (1 genes)
Oryza alta (3 genes)
Oryza brachyantha (1 genes)
Oryza sativa Kitaake (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (0 genes)
Panicum hallii (1 genes)
Phyllostachys edulis (1 genes)
Physcomitrium patens (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (1 genes)
Saccharum spontaneum (5 genes)
Secale cereale (1 genes)
Selaginella moellendorffii (0 genes)
Sequoiadendron giganteum (1 genes)
Setaria italica (1 genes)
Setaria viridis (1 genes)
Solanum lycopersicum (7 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum dicoccoides (2 genes)
Triticum turgidum (2 genes)
Vanilla planifolia (1 genes)
Zea mays B73 (1 genes)
Zea mays B104 (2 genes)
Zostera marina (0 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

Program Settings