Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g050400.3 Solanum lycopersicum HOM05M000864 ORTHO05M003292 4.1e-53 210.3 103 100.0
Solyc12g044690.3 Solanum lycopersicum HOM05M000864 ORTHO05M003292 4.0e-48 193.7 102 93.1
Solyc07g019620.3 Solanum lycopersicum HOM05M000864 ORTHO05M003292 7.5e-47 189.5 102 92.2
Solyc11g020030.3 Solanum lycopersicum HOM05M000864 ORTHO05M003292 1.3e-43 178.7 92 94.6
Solyc06g073330.4 Solanum lycopersicum HOM05M000864 ORTHO05M003292 1.4e-40 168.7 85 95.3
Potri.006G166000 Populus trichocarpa HOM05M000864 ORTHO05M003292 7.3e-34 146.4 85 78.8
Potri.018G090600 Populus trichocarpa HOM05M000864 ORTHO05M003292 1.6e-33 145.2 85 77.6
DDU879G0308 Dioscorea dumetorum HOM05M000864 ORTHO05M003292 2.1e-33 144.8 85 76.5
GWHGAZTO025240 Oryza alta HOM05M000864 ORTHO05M003292 2.8e-33 144.4 85 77.6
Potri.018G090400 Populus trichocarpa HOM05M000864 ORTHO05M003292 4.7e-33 143.7 85 76.5
OsKitaake03g242700 Oryza sativa Kitaake HOM05M000864 ORTHO05M003292 6.2e-33 143.3 85 76.5
Os03g0586800 Oryza sativa ssp. japonica HOM05M000864 ORTHO05M003292 6.2e-33 143.3 85 76.5
SEGI_22674 Sequoiadendron giganteum HOM05M000864 ORTHO05M003292 6.2e-33 143.3 85 76.5
GWHGAZTO075259 Oryza alta HOM05M000864 ORTHO05M003292 8.1e-33 142.9 85 76.5
OsR498G0306468000.01 Oryza sativa ssp. indica HOM05M000864 ORTHO05M003292 8.1e-33 142.9 85 76.5
PH02Gene28044 Phyllostachys edulis HOM05M000864 ORTHO05M003292 1.4e-32 142.1 85 75.3
Spipo6G0005000 Spirodela polyrhiza HOM05M000864 ORTHO05M003292 1.4e-32 142.1 85 74.1
Zosma04g21510 Zostera marina HOM05M000864 ORTHO05M003292 1.4e-32 142.1 85 75.3
AET5Gv21024400 Aegilops tauschii HOM05M000864 ORTHO05M003292 6.9e-32 139.8 85 74.1
Bradi1g15370 Brachypodium distachyon HOM05M000864 ORTHO05M003292 6.9e-32 139.8 85 74.1
CDE10G1081 Ceratophyllum demersum HOM05M000864 ORTHO05M003292 6.9e-32 139.8 85 74.1
Horvu_MOREX_5H01G627400 Hordeum vulgare HOM05M000864 ORTHO05M003292 6.9e-32 139.8 85 74.1
MBI06_g35964_MAGBIO Magnolia biondii HOM05M000864 ORTHO05M003292 6.9e-32 139.8 85 74.1
GWHGASIY028813 Secale cereale HOM05M000864 ORTHO05M003292 6.9e-32 139.8 85 74.1
SEGI_35430 Sequoiadendron giganteum HOM05M000864 ORTHO05M003292 6.9e-32 139.8 85 75.3
TraesCS5A03G1043000 Triticum aestivum HOM05M000864 ORTHO05M003292 6.9e-32 139.8 85 74.1
TraesCS5B03G1095000 Triticum aestivum HOM05M000864 ORTHO05M003292 6.9e-32 139.8 85 74.1
TraesCS5D03G0987200 Triticum aestivum HOM05M000864 ORTHO05M003292 6.9e-32 139.8 85 74.1
TRIDC5AG063480 Triticum dicoccoides HOM05M000864 ORTHO05M003292 6.9e-32 139.8 85 74.1
TRIDC5BG067990 Triticum dicoccoides HOM05M000864 ORTHO05M003292 6.9e-32 139.8 85 74.1
TRITD5Av1G220060 Triticum turgidum HOM05M000864 ORTHO05M003292 6.9e-32 139.8 85 74.1
TRITD5Bv1G217960 Triticum turgidum HOM05M000864 ORTHO05M003292 6.9e-32 139.8 85 74.1
OB03G33160 Oryza brachyantha HOM05M000864 ORTHO05M003292 9.0e-32 139.4 85 72.9
Zosma03g05470 Zostera marina HOM05M000864 ORTHO05M003292 9.0e-32 139.4 85 74.1
Aco019351 Ananas comosus HOM05M000864 ORTHO05M003292 1.2e-31 139.0 85 72.9
Dexi9B01G0016800 Digitaria exilis HOM05M000864 ORTHO05M003292 2.0e-31 138.3 85 71.8
V3.Lp_chr4_0G16732 Lolium perenne HOM05M000864 ORTHO05M003292 2.0e-31 138.3 85 74.1
PH02Gene32290 Phyllostachys edulis HOM05M000864 ORTHO05M003292 2.0e-31 138.3 85 74.1
Dexi9A01G0017110 Digitaria exilis HOM05M000864 ORTHO05M003292 2.6e-31 137.9 85 71.8
Misin01G164600 Miscanthus sinensis HOM05M000864 ORTHO05M003292 2.6e-31 137.9 85 71.8
Misin02G155500 Miscanthus sinensis HOM05M000864 ORTHO05M003292 2.6e-31 137.9 85 71.8
Sobic.001G178400 Sorghum bicolor HOM05M000864 ORTHO05M003292 2.6e-31 137.9 85 71.8
Pahal.9G175000 Panicum hallii HOM05M000864 ORTHO05M003292 4.4e-31 137.1 85 70.6
SEGI_37908 Sequoiadendron giganteum HOM05M000864 ORTHO05M003292 4.4e-31 137.1 85 72.9
Zm00001eb219500 Zea mays B73 HOM05M000864 ORTHO05M003292 4.4e-31 137.1 85 70.6
Zm00007a00004869 Zea mays B104 HOM05M000864 ORTHO05M003292 4.4e-31 137.1 85 70.6
AT3G11710 Arabidopsis thaliana HOM05M000864 ORTHO05M003292 5.8e-31 136.7 85 71.8
Ma10_g28260 Musa acuminata HOM05M000864 ORTHO05M003292 9.9e-31 136.0 85 70.6
Seita.9G178100 Setaria italica HOM05M000864 ORTHO05M003292 9.9e-31 136.0 85 70.6
Sevir.9G176900 Setaria viridis HOM05M000864 ORTHO05M003292 9.9e-31 136.0 85 70.6
p5.00_sc00051_p0091 Elaeis guineensis HOM05M000864 ORTHO05M003292 1.3e-30 135.6 85 70.6
Zjn_sc00019.1.g00590.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M000864 ORTHO05M003292 2.2e-30 134.8 80 75.0
Asa8G00803 Allium sativum HOM05M000864 ORTHO05M003292 3.8e-30 134.0 85 71.8
Solyc10g076610.2 Solanum lycopersicum HOM05M000864 ORTHO05M003292 4.9e-30 133.7 85 67.1
Sspon.01G0022650-2B Saccharum spontaneum HOM05M000864 ORTHO05M003292 6.4e-30 133.3 85 69.4
Zm00001eb049290 Zea mays B73 HOM05M000864 ORTHO05M003292 6.4e-30 133.3 85 68.2
Zm00007a00014505 Zea mays B104 HOM05M000864 ORTHO05M003292 6.4e-30 133.3 85 68.2
ATR1136G155 Amborella trichopoda HOM05M000864 ORTHO05M003292 1.4e-29 132.1 85 67.1
CALSI_Maker00001707 Calamus simplicifolius HOM05M000864 ORTHO05M003292 1.4e-29 132.1 85 67.1
evm.TU.AsparagusV1_02.1237.V1.1 Asparagus officinalis HOM05M000864 ORTHO05M003292 1.9e-29 131.7 84 69.0
SEGI_08077 Sequoiadendron giganteum HOM05M000864 ORTHO05M003292 1.9e-29 131.7 85 69.4
p5.00_sc00462_p0001 Elaeis guineensis HOM05M000864 ORTHO05M003292 5.4e-29 130.2 85 69.4
Glyma.10G069800 Glycine max HOM05M000864 ORTHO05M003292 3.5e-28 127.5 86 68.6
Glyma.13G152678 Glycine max HOM05M000864 ORTHO05M003292 6.0e-28 126.7 86 68.6
Glyma.17G028300 Glycine max HOM05M000864 ORTHO05M003292 6.0e-28 126.7 86 69.8
Zm00007a00001722 Zea mays B104 HOM05M000864 ORTHO05M003292 1.7e-27 125.2 79 68.4
TraesCS4B03G0075400 Triticum aestivum HOM05M000864 ORTHO05M003292 1.1e-26 122.5 85 65.9
TRITD4Bv1G009640 Triticum turgidum HOM05M000864 ORTHO05M003292 1.1e-26 122.5 85 65.9
TraesCS4A03G0717700 Triticum aestivum HOM05M000864 ORTHO05M003292 2.5e-26 121.3 85 64.7
TRIDC4AG043230 Triticum dicoccoides HOM05M000864 ORTHO05M003292 2.5e-26 121.3 85 64.7
TRITD4Av1G196410 Triticum turgidum HOM05M000864 ORTHO05M003292 2.5e-26 121.3 85 64.7
V3.Lp_chr4_0G7636 Lolium perenne HOM05M000864 ORTHO05M003292 9.6e-26 119.4 85 62.4
Mapoly0090s0010 Marchantia polymorpha HOM05M000864 ORTHO05M003292 2.1e-25 118.2 85 62.4
GWHGASIY018245 Secale cereale HOM05M000864 ORTHO05M003292 2.8e-25 117.9 85 63.5
TraesCS3B03G0727600 Triticum aestivum HOM05M000864 ORTHO05M003292 4.8e-25 117.1 85 63.5
TraesCS4B03G0074300 Triticum aestivum HOM05M000864 ORTHO05M003292 4.8e-25 117.1 85 63.5
TraesCS4D03G0054700 Triticum aestivum HOM05M000864 ORTHO05M003292 4.8e-25 117.1 85 63.5
TRIDC4BG005670 Triticum dicoccoides HOM05M000864 ORTHO05M003292 4.8e-25 117.1 85 63.5
TRITD3Bv1G147080 Triticum turgidum HOM05M000864 ORTHO05M003292 4.8e-25 117.1 85 63.5
TraesCS3B03G0138700 Triticum aestivum HOM05M000864 ORTHO05M003292 6.2e-25 116.7 93 61.3
EJB05_05832 Eragrostis curvula HOM05M000864 ORTHO05M003292 1.4e-24 115.5 87 64.4
EJB05_50578 Eragrostis curvula HOM05M000864 ORTHO05M003292 1.4e-24 115.5 87 64.4
TRIDC3BG008170 Triticum dicoccoides HOM05M000864 ORTHO05M003292 1.4e-24 115.5 86 61.6
AagrBONN_evm.TU.Sc2ySwM_344.1321 Anthoceros agrestis HOM05M000864 ORTHO05M003292 1.8e-24 115.2 85 61.2
CALSI_Maker00041965 Calamus simplicifolius HOM05M000864 ORTHO05M003292 1.8e-24 115.2 72 68.1
TRITD4Bv1G009460 Triticum turgidum HOM05M000864 ORTHO05M003292 1.8e-24 115.2 85 62.4
Horvu_MOREX_4H01G032800 Hordeum vulgare HOM05M000864 ORTHO05M003292 3.1e-24 114.4 85 61.2
Sspon.01G0022650-1A Saccharum spontaneum HOM05M000864 ORTHO05M003292 3.1e-24 114.4 70 71.4
TraesCS3B03G0139100 Triticum aestivum HOM05M000864 ORTHO05M003292 5.3e-24 113.6 86 60.5
TraesCSU03G0442600 Triticum aestivum HOM05M000864 ORTHO05M003292 5.3e-24 113.6 86 60.5
TRIDC3BG008130 Triticum dicoccoides HOM05M000864 ORTHO05M003292 5.3e-24 113.6 86 60.5
TRIDC3BG008140 Triticum dicoccoides HOM05M000864 ORTHO05M003292 5.3e-24 113.6 86 60.5
TRITD3Bv1G016570 Triticum turgidum HOM05M000864 ORTHO05M003292 5.3e-24 113.6 86 60.5
TraesCS3A03G0108500 Triticum aestivum HOM05M000864 ORTHO05M003292 2.6e-23 111.3 84 60.7
TRITD3Av1G013310 Triticum turgidum HOM05M000864 ORTHO05M003292 2.6e-23 111.3 84 60.7
GWHGASIY013048 Secale cereale HOM05M000864 ORTHO05M003292 3.4e-23 110.9 85 60.0
TRIDC4BG005730 Triticum dicoccoides HOM05M000864 ORTHO05M003292 3.4e-23 110.9 85 61.2
TRITD3Bv1G016590 Triticum turgidum HOM05M000864 ORTHO05M003292 4.5e-23 110.5 86 59.3
TraesCS3B03G0139300 Triticum aestivum HOM05M000864 ORTHO05M003292 5.8e-23 110.2 86 59.3
Bradi1g11876 Brachypodium distachyon HOM05M000864 ORTHO05M003292 2.9e-22 107.8 85 57.6
Ot_Chr4_g24561 Oropetium thomaeum HOM05M000864 ORTHO05M003292 2.9e-22 107.8 85 60.0
Pp3c4_7510 Physcomitrium patens HOM05M000864 ORTHO05M003292 2.9e-22 107.8 90 56.7
CBR_g37546 Chara braunii HOM05M000864 ORTHO05M003292 4.9e-22 107.1 85 55.3
GWHGASIY013047 Secale cereale HOM05M000864 ORTHO05M003292 6.4e-22 106.7 72 62.5
TRIDC3AG006020 Triticum dicoccoides HOM05M000864 ORTHO05M003292 8.4e-22 106.3 84 58.3
CALSI_Maker00038705 Calamus simplicifolius HOM05M000864 ORTHO05M003292 1.4e-21 105.5 65 72.3
SMO365G0058 Selaginella moellendorffii HOM05M000864 ORTHO05M003292 1.4e-21 105.5 85 52.9
Pp3c12_20520 Physcomitrium patens HOM05M000864 ORTHO05M003292 2.4e-21 104.8 90 54.4
PRCOL_00000537 Prasinoderma coloniale HOM05M000864 ORTHO05M003292 1.9e-18 95.1 85 50.6
SMO365G0017 Selaginella moellendorffii HOM05M000864 ORTHO05M003292 3.1e-16 87.8 85 41.2
MBI06_g41415_MAGBIO Magnolia biondii HOM05M000864 ORTHO05M003292 2.6e-15 84.7 54 70.4
MCO12G184 Micromonas commoda HOM05M000864 ORTHO05M003292 2.2e-14 81.6 83 47.0
Cre03.g160500 Chlamydomonas reinhardtii HOM05M000864 ORTHO05M003292 3.8e-14 80.9 85 44.7
Asa6G00173 Allium sativum HOM05M000864 ORTHO05M003292 6.4e-14 80.1 53 69.8


User provided reference genes

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