Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g076910.3 Solanum lycopersicum HOM05M002336 ORTHO05M002574 0.0e+00 2209.1 1151 100.0
Potri.002G107400 Populus trichocarpa HOM05M002336 ORTHO05M002574 0.0e+00 1112.8 1121 57.9
Glyma.06G091300 Glycine max HOM05M002336 ORTHO05M002574 4.3e-308 1060.8 1127 55.7
Glyma.04G089400 Glycine max HOM05M002336 ORTHO05M002574 3.5e-302 1041.2 1121 55.5
ATR0767G254 Amborella trichopoda HOM05M002336 ORTHO05M002574 2.3e-269 932.2 1177 50.2
p5.00_sc00008_p0026 Elaeis guineensis HOM05M002336 ORTHO05M002574 6.5e-264 914.1 1195 48.0
CALSI_Maker00003464 Calamus simplicifolius HOM05M002336 ORTHO05M002574 4.5e-257 891.3 1166 48.0
AT1G27595 Arabidopsis thaliana HOM05M002336 ORTHO05M002574 7.7e-257 890.6 1149 48.5
Aco018326 Ananas comosus HOM05M002336 ORTHO05M002574 8.5e-256 887.1 1072 50.2
PH02Gene06577 Phyllostachys edulis HOM05M002336 ORTHO05M002574 1.6e-238 829.7 1129 46.5
PH02Gene38414 Phyllostachys edulis HOM05M002336 ORTHO05M002574 1.0e-237 827.0 1125 47.1
OsR498G0101815600.01 Oryza sativa ssp. indica HOM05M002336 ORTHO05M002574 3.1e-234 815.5 1120 46.2
Zosma04g00100 Zostera marina HOM05M002336 ORTHO05M002574 9.1e-234 813.9 1140 45.8
GWHGAZTO056892 Oryza alta HOM05M002336 ORTHO05M002574 1.3e-232 810.1 1117 46.0
Bradi2g47267 Brachypodium distachyon HOM05M002336 ORTHO05M002574 5.0e-232 808.1 1122 45.9
TraesCS3B03G0755300 Triticum aestivum HOM05M002336 ORTHO05M002574 8.5e-232 807.4 1116 46.2
evm.TU.AsparagusV1_07.237.V1.1 Asparagus officinalis HOM05M002336 ORTHO05M002574 1.5e-231 806.6 1128 46.3
Asa2G05717 Allium sativum HOM05M002336 ORTHO05M002574 7.2e-231 804.3 1097 46.2
GWHGAZTO004529 Oryza alta HOM05M002336 ORTHO05M002574 9.4e-231 803.9 1133 46.1
HPP92_023652 Vanilla planifolia HOM05M002336 ORTHO05M002574 1.2e-230 803.5 1111 45.1
TRITD3Bv1G153890 Triticum turgidum HOM05M002336 ORTHO05M002574 3.0e-229 798.9 1084 46.8
OB01G36590 Oryza brachyantha HOM05M002336 ORTHO05M002574 4.0e-229 798.5 1118 45.9
OsKitaake01g289000 Oryza sativa Kitaake HOM05M002336 ORTHO05M002574 4.0e-229 798.5 1084 46.3
Sevir.5G284300 Setaria viridis HOM05M002336 ORTHO05M002574 5.2e-229 798.1 1134 45.9
Seita.5G281700 Setaria italica HOM05M002336 ORTHO05M002574 6.8e-229 797.7 1136 45.6
Misin06G251200 Miscanthus sinensis HOM05M002336 ORTHO05M002574 8.8e-229 797.3 1121 45.9
Pahal.5G195600 Panicum hallii HOM05M002336 ORTHO05M002574 1.5e-228 796.6 1117 45.9
Zm00001eb155980 Zea mays B73 HOM05M002336 ORTHO05M002574 2.0e-228 796.2 1082 46.1
TRIDC3BG043880 Triticum dicoccoides HOM05M002336 ORTHO05M002574 7.5e-228 794.3 1115 45.7
V3.Lp_chr3_0G15200 Lolium perenne HOM05M002336 ORTHO05M002574 1.3e-227 793.5 1122 45.8
EJB05_17332 Eragrostis curvula HOM05M002336 ORTHO05M002574 4.8e-227 791.6 1116 45.0
Misin05G240500 Miscanthus sinensis HOM05M002336 ORTHO05M002574 9.1e-226 787.3 1117 45.0
GWHGAORA031980 Cenchrus purpureus HOM05M002336 ORTHO05M002574 7.7e-225 784.3 1141 44.5
Sobic.004G291900 Sorghum bicolor HOM05M002336 ORTHO05M002574 7.7e-225 784.3 1118 45.2
Ot_Chr3_g11513 Oropetium thomaeum HOM05M002336 ORTHO05M002574 5.0e-224 781.6 1119 44.8
TraesCS3D03G0604500 Triticum aestivum HOM05M002336 ORTHO05M002574 1.9e-223 779.6 1117 44.7
GWHGASIY015659 Secale cereale HOM05M002336 ORTHO05M002574 1.0e-221 773.9 1115 44.8
GWHGASIY043094 Secale cereale HOM05M002336 ORTHO05M002574 1.0e-221 773.9 1115 44.8
Horvu_MOREX_3H01G383600 Hordeum vulgare HOM05M002336 ORTHO05M002574 4.0e-221 771.9 1148 44.3
TraesCS3A03G0661500 Triticum aestivum HOM05M002336 ORTHO05M002574 2.0e-220 769.6 1118 44.4
Sobic.003G266100 Sorghum bicolor HOM05M002336 ORTHO05M002574 1.7e-219 766.5 1122 44.5
TRITD3Av1G173120 Triticum turgidum HOM05M002336 ORTHO05M002574 9.2e-218 760.8 1080 45.0
GWHGAORA044458 Cenchrus purpureus HOM05M002336 ORTHO05M002574 6.6e-208 728.0 1140 43.0
Dexi5B01G0024370 Digitaria exilis HOM05M002336 ORTHO05M002574 6.4e-203 711.4 1097 42.8
Dexi5A01G0024130 Digitaria exilis HOM05M002336 ORTHO05M002574 8.3e-203 711.1 1098 42.9
Mapoly0035s0121 Marchantia polymorpha HOM05M002336 ORTHO05M002574 3.3e-199 699.1 1173 41.3
ATR0681G274 Amborella trichopoda HOM05M002336 ORTHO05M002574 2.8e-198 696.0 1147 41.6
evm.TU.AsparagusV1_05.365.V1.1 Asparagus officinalis HOM05M002336 ORTHO05M002574 1.5e-191 673.7 859 48.7
DDU613G0334 Dioscorea dumetorum HOM05M002336 ORTHO05M002574 1.7e-187 660.2 1028 44.4
Potri.016G116600 Populus trichocarpa HOM05M002336 ORTHO05M002574 6.4e-187 658.3 1127 40.2
p5.00_sc00121_p0044 Elaeis guineensis HOM05M002336 ORTHO05M002574 1.0e-184 651.0 1153 39.6
AagrBONN_evm.TU.Sc2ySwM_362.1261 Anthoceros agrestis HOM05M002336 ORTHO05M002574 1.7e-176 623.6 1117 39.7
Glyma.03G057600 Glycine max HOM05M002336 ORTHO05M002574 2.1e-174 616.7 1141 38.4
Glyma.01G121400 Glycine max HOM05M002336 ORTHO05M002574 3.6e-174 615.9 1151 37.5
Pp3c2_10640 Physcomitrium patens HOM05M002336 ORTHO05M002574 5.3e-173 612.1 1119 38.6
Ma06_g17130 Musa acuminata HOM05M002336 ORTHO05M002574 1.5e-172 610.5 1135 38.0
SMO141G0211 Selaginella moellendorffii HOM05M002336 ORTHO05M002574 2.6e-172 609.8 1087 38.2
Aco011048 Ananas comosus HOM05M002336 ORTHO05M002574 7.6e-172 608.2 1124 38.4
Sspon.03G0008430-1A Saccharum spontaneum HOM05M002336 ORTHO05M002574 1.2e-169 600.9 931 43.9
CALSI_Maker00042788 Calamus simplicifolius HOM05M002336 ORTHO05M002574 1.2e-164 584.3 1070 38.1
CDE01G0414 Ceratophyllum demersum HOM05M002336 ORTHO05M002574 1.5e-164 583.9 838 45.8
Spipo29G0018100 Spirodela polyrhiza HOM05M002336 ORTHO05M002574 5.5e-162 575.5 1092 38.2
Zosma02g21560 Zostera marina HOM05M002336 ORTHO05M002574 7.1e-162 575.1 1124 37.5
AT5G01400 Arabidopsis thaliana HOM05M002336 ORTHO05M002574 1.3e-158 564.3 1146 35.6
OsKitaake07g284500 Oryza sativa Kitaake HOM05M002336 ORTHO05M002574 4.8e-158 562.4 1081 37.7
Os07g0693900 Oryza sativa ssp. japonica HOM05M002336 ORTHO05M002574 4.8e-158 562.4 1081 37.7
PH02Gene08305 Phyllostachys edulis HOM05M002336 ORTHO05M002574 4.8e-158 562.4 1120 37.1
GWHGASIY006137 Secale cereale HOM05M002336 ORTHO05M002574 2.4e-157 560.1 1144 36.9
V3.Lp_chr2_0G614 Lolium perenne HOM05M002336 ORTHO05M002574 1.7e-155 553.9 1092 36.8
AET2Gv20157200 Aegilops tauschii HOM05M002336 ORTHO05M002574 2.2e-155 553.5 1117 37.4
Horvu_MOREX_2H01G087200 Hordeum vulgare HOM05M002336 ORTHO05M002574 6.5e-155 552.0 1119 36.7
OB07G32870 Oryza brachyantha HOM05M002336 ORTHO05M002574 6.5e-155 552.0 1112 37.2
Sobic.002G430300 Sorghum bicolor HOM05M002336 ORTHO05M002574 8.4e-155 551.6 1111 36.7
GWHGAZTO081357 Oryza alta HOM05M002336 ORTHO05M002574 1.9e-154 550.4 1125 37.1
TraesCS2A03G0164400 Triticum aestivum HOM05M002336 ORTHO05M002574 1.9e-154 550.4 1121 37.1
TRIDC2BG011150 Triticum dicoccoides HOM05M002336 ORTHO05M002574 7.1e-154 548.5 1116 36.8
TraesCS2B03G0229100 Triticum aestivum HOM05M002336 ORTHO05M002574 1.6e-153 547.4 1116 36.9
Misin04G409300 Miscanthus sinensis HOM05M002336 ORTHO05M002574 6.7e-152 542.0 1114 36.4
TraesCS2D03G0162400 Triticum aestivum HOM05M002336 ORTHO05M002574 8.7e-152 541.6 1115 36.4
Zm00001eb331590 Zea mays B73 HOM05M002336 ORTHO05M002574 8.7e-152 541.6 1106 37.1
Seita.2G443400 Setaria italica HOM05M002336 ORTHO05M002574 1.1e-151 541.2 1084 36.6
Bradi1g16570 Brachypodium distachyon HOM05M002336 ORTHO05M002574 1.5e-151 540.8 1168 36.5
Sevir.2G455500 Setaria viridis HOM05M002336 ORTHO05M002574 2.5e-151 540.0 1084 36.6
GWHGAORA050058 Cenchrus purpureus HOM05M002336 ORTHO05M002574 4.3e-151 539.3 1084 36.8
Pahal.2G499900 Panicum hallii HOM05M002336 ORTHO05M002574 6.3e-150 535.4 1110 35.8
Ot_Chr7_g10117 Oropetium thomaeum HOM05M002336 ORTHO05M002574 9.0e-149 531.6 1088 35.8
DDU059G0074 Dioscorea dumetorum HOM05M002336 ORTHO05M002574 2.0e-148 530.4 1209 34.9
Asa2G02889 Allium sativum HOM05M002336 ORTHO05M002574 2.6e-148 530.0 1074 35.9
Ma08_g32260 Musa acuminata HOM05M002336 ORTHO05M002574 2.7e-145 520.0 447 63.1
EJB05_10391 Eragrostis curvula HOM05M002336 ORTHO05M002574 1.7e-142 510.8 1043 36.3
GWHGAORA005762 Cenchrus purpureus HOM05M002336 ORTHO05M002574 1.5e-140 504.2 1072 35.7
MBI14_g09758_MAGBIO Magnolia biondii HOM05M002336 ORTHO05M002574 2.2e-123 447.2 1138 33.3
GWHGAZTO093192 Oryza alta HOM05M002336 ORTHO05M002574 8.5e-123 445.3 992 35.4
Zm00007a00023411 Zea mays B104 HOM05M002336 ORTHO05M002574 1.9e-122 444.1 1106 34.4
Ma08_g32270 Musa acuminata HOM05M002336 ORTHO05M002574 2.8e-118 430.3 701 42.1
Zm00007a00033885 Zea mays B104 HOM05M002336 ORTHO05M002574 5.4e-117 426.0 896 36.7
Dexi2B01G0036530 Digitaria exilis HOM05M002336 ORTHO05M002574 3.8e-115 419.9 1143 32.2
Dexi2A01G0037510 Digitaria exilis HOM05M002336 ORTHO05M002574 2.5e-114 417.2 1143 32.1
OsR498G0715015300.01 Oryza sativa ssp. indica HOM05M002336 ORTHO05M002574 2.1e-113 414.1 809 38.3
TRITD2Av1G019750 Triticum turgidum HOM05M002336 ORTHO05M002574 3.0e-112 410.2 1004 34.2
Solyc09g005340.3 Solanum lycopersicum HOM05M002336 ORTHO05M002574 2.0e-111 407.5 420 53.3
TRITD2Bv1G026090 Triticum turgidum HOM05M002336 ORTHO05M002574 2.6e-111 407.1 1000 33.8
TRIDC3AG038760 Triticum dicoccoides HOM05M002336 ORTHO05M002574 3.1e-109 400.2 826 37.3
CBR_g40840 Chara braunii HOM05M002336 ORTHO05M002574 3.8e-107 393.3 637 39.9
AET3Gv20629000 Aegilops tauschii HOM05M002336 ORTHO05M002574 6.6e-99 365.9 692 38.6
Sspon.03G0008420-2C Saccharum spontaneum HOM05M002336 ORTHO05M002574 3.3e-98 363.6 465 48.4
evm.TU.AsparagusV1_07.462.V1.1 Asparagus officinalis HOM05M002336 ORTHO05M002574 8.9e-96 355.5 883 33.6
Aco029452 Ananas comosus HOM05M002336 ORTHO05M002574 8.3e-94 349.0 386 51.6
Spipo3G0093500 Spirodela polyrhiza HOM05M002336 ORTHO05M002574 9.2e-93 345.5 377 52.8
Sspon.03G0008420-1A Saccharum spontaneum HOM05M002336 ORTHO05M002574 7.8e-92 342.4 726 36.9
Sspon.03G0008450-2C Saccharum spontaneum HOM05M002336 ORTHO05M002574 8.3e-86 322.4 435 46.2
PRCOL_00002127 Prasinoderma coloniale HOM05M002336 ORTHO05M002574 2.8e-81 307.4 630 33.7
SEGI_29268 Sequoiadendron giganteum HOM05M002336 ORTHO05M002574 1.5e-66 258.5 668 32.8
MCO14G537 Micromonas commoda HOM05M002336 ORTHO05M002574 9.0e-64 249.2 632 29.7
evm.TU.AsparagusV1_07.463.V1.1 Asparagus officinalis HOM05M002336 ORTHO05M002574 1.3e-62 245.4 205 60.0
CDE01G0432 Ceratophyllum demersum HOM05M002336 ORTHO05M002574 1.4e-56 225.3 807 28.1
Sspon.02G0032900-2D Saccharum spontaneum HOM05M002336 ORTHO05M002574 8.4e-46 189.5 637 28.3
Misin04G408100 Miscanthus sinensis HOM05M002336 ORTHO05M002574 3.0e-43 181.0 789 27.6
CDE01G0656 Ceratophyllum demersum HOM05M002336 ORTHO05M002574 2.5e-42 177.9 128 71.1
Solyc09g005330.3 Solanum lycopersicum HOM05M002336 ORTHO05M002574 4.3e-42 177.2 681 28.0
Sspon.03G0008450-1A Saccharum spontaneum HOM05M002336 ORTHO05M002574 3.7e-41 174.1 266 43.6
Os01g0694300 Oryza sativa ssp. japonica HOM05M002336 ORTHO05M002574 5.5e-37 160.2 140 60.7
SEGI_33251 Sequoiadendron giganteum HOM05M002336 ORTHO05M002574 8.7e-35 152.9 142 59.2
Cre02.g099200 Chlamydomonas reinhardtii HOM05M002336 ORTHO05M002574 7.4e-34 149.8 421 29.5
Zjn_sc00029.1.g03120.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM05M002336 ORTHO05M002574 9.7e-34 149.4 481 31.0
Zm00007a00050277 Zea mays B104 HOM05M002336 ORTHO05M002574 8.2e-33 146.4 130 59.2
Bradi3g00320 Brachypodium distachyon HOM05M002336 ORTHO05M002574 6.1e-28 130.2 210 42.4
MBI13_g05164_MAGBIO Magnolia biondii HOM05M002336 ORTHO05M002045 2.4e-24 118.2 90 68.9
MBI05_g37894_MAGBIO Magnolia biondii HOM05M002336 ORTHO05M002574 3.1e-24 117.9 90 67.8
MBI18_g10804_MAGBIO Magnolia biondii HOM05M002336 ORTHO05M002045 1.3e-22 112.5 85 69.4
Sspon.03G0008430-3C Saccharum spontaneum HOM05M002336 ORTHO05M002574 1.7e-22 112.1 375 32.3
Misin04G408200 Miscanthus sinensis HOM05M002336 ORTHO05M002574 7.2e-21 106.7 112 53.6
Sspon.02G0032900-1B Saccharum spontaneum HOM05M002336 ORTHO05M002574 7.2e-21 106.7 97 50.5
Sspon.03G0008410-1A Saccharum spontaneum HOM05M002336 ORTHO05M002574 4.7e-20 104.0 121 45.5
evm.TU.AsparagusV1_05.366.V1.1 Asparagus officinalis HOM05M002336 ORTHO05M002574 1.4e-19 102.4 153 43.8
Zjn_sc00166.1.g00480.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M002336 ORTHO05M002574 6.3e-17 93.6 103 50.5
CBR_g40839 Chara braunii HOM05M002336 ORTHO05M002574 1.6e-15 89.0 72 59.7
SEGI_02970 Sequoiadendron giganteum HOM05M002336 ORTHO05M002574 1.0e-11 76.3 240 29.6
TRIDC2AG009370 Triticum dicoccoides HOM05M002336 ORTHO05M002574 3.0e-11 74.7 616 24.5
Sspon.03G0008430-2B Saccharum spontaneum HOM05M002336 ORTHO05M002574 6.3e-09 67.0 169 35.5
AT1G27570 Arabidopsis thaliana HOM05M000699 ORTHO05M002574 3.5e-07 61.2 129 34.1
AagrBONN_evm.TU.Sc2ySwM_362.1264 Anthoceros agrestis HOM05M002336 ORTHO05M002574 7.7e-07 60.1 744 23.0

Aegilops tauschii (2 genes)
Allium sativum (2 genes)
Amborella trichopoda (2 genes)
Ananas comosus (3 genes)
Anthoceros agrestis (2 genes)
Arabidopsis thaliana (3 genes)
Asparagus officinalis (5 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (2 genes)
Cenchrus purpureus (4 genes)
Ceratophyllum demersum (3 genes)
Chara braunii (2 genes)
Chlamydomonas reinhardtii (1 genes)
Digitaria exilis (4 genes)
Dioscorea dumetorum (2 genes)
Elaeis guineensis (2 genes)
Eragrostis curvula (2 genes)
Glycine max (4 genes)
Hordeum vulgare (2 genes)
Lolium perenne (2 genes)
Magnolia biondii (4 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (5 genes)
Musa acuminata (3 genes)
Oropetium thomaeum (2 genes)
Oryza alta (4 genes)
Oryza brachyantha (2 genes)
Oryza sativa Kitaake (2 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (2 genes)
Panicum hallii (2 genes)
Phyllostachys edulis (3 genes)
Physcomitrium patens (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (1 genes)
Saccharum spontaneum (10 genes)
Secale cereale (3 genes)
Selaginella moellendorffii (1 genes)
Sequoiadendron giganteum (3 genes)
Setaria italica (2 genes)
Setaria viridis (2 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (6 genes)
Triticum dicoccoides (4 genes)
Triticum turgidum (4 genes)
Vanilla planifolia (1 genes)
Zea mays B73 (2 genes)
Zea mays B104 (3 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

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