Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g017940.3 Solanum lycopersicum HOM05M002317 ORTHO05M002464 4.0e-101 370.5 174 100.0
Solyc04g017800.1 Solanum lycopersicum HOM05M002317 ORTHO05M002464 8.4e-83 309.7 172 85.5
Solyc07g064380.4 Solanum lycopersicum HOM05M002317 ORTHO05M002464 4.3e-71 270.8 227 60.4
Solyc04g017880.1 Solanum lycopersicum HOM05M002317 ORTHO05M002464 7.7e-60 233.4 172 66.9
Solyc04g017780.3 Solanum lycopersicum HOM05M002317 ORTHO05M002464 2.5e-58 228.4 187 63.1
Solyc04g018000.3 Solanum lycopersicum HOM05M002317 ORTHO05M002464 2.3e-48 195.3 187 55.6
Solyc04g017920.1 Solanum lycopersicum HOM05M002317 ORTHO05M002464 1.7e-46 189.1 92 91.3
Solyc07g064360.3 Solanum lycopersicum HOM05M002317 ORTHO05M002464 1.6e-44 182.6 242 43.8
Solyc04g017840.1 Solanum lycopersicum HOM05M002317 ORTHO05M002464 4.2e-42 174.5 167 55.1
Solyc04g017850.1 Solanum lycopersicum HOM05M002317 ORTHO05M002464 5.7e-31 137.5 140 52.9
Solyc04g018030.1 Solanum lycopersicum HOM05M002317 ORTHO05M002464 1.8e-29 132.5 64 95.3
Solyc07g064400.2 Solanum lycopersicum HOM05M002317 ORTHO05M002464 1.2e-23 113.2 107 46.7
AT1G32120 Arabidopsis thaliana HOM05M002317 ORTHO05M002464 9.8e-23 110.2 107 49.5
Spipo1G0120700 Spirodela polyrhiza HOM05M002317 ORTHO05M002464 6.0e-20 100.9 234 29.9
evm.TU.AsparagusV1_Unassigned.1163.V1.1 Asparagus officinalis HOM05M002317 ORTHO05M002464 7.8e-20 100.5 221 29.9
AT1G50750 Arabidopsis thaliana HOM05M002317 ORTHO05M002464 3.0e-19 98.6 159 40.9
CALSI_Maker00048172 Calamus simplicifolius HOM05M002317 ORTHO05M002464 3.0e-19 98.6 230 30.9
Ma08_g09240 Musa acuminata HOM05M002317 ORTHO05M002464 1.5e-18 96.3 106 40.6
CALSI_Maker00020596 Calamus simplicifolius HOM05M002317 ORTHO05M002464 1.9e-18 95.9 106 45.3
HPP92_005289 Vanilla planifolia HOM05M002317 ORTHO05M002464 2.5e-18 95.5 106 47.2
AT4G16050 Arabidopsis thaliana HOM05M002317 ORTHO05M002464 4.3e-18 94.7 226 33.2
CALSI_Maker00044041 Calamus simplicifolius HOM05M002317 ORTHO05M002464 9.5e-18 93.6 185 35.1
CALSI_Maker00004333 Calamus simplicifolius HOM05M002317 ORTHO05M002464 1.6e-17 92.8 106 40.6
evm.TU.AsparagusV1_Unassigned.325.V1.1 Asparagus officinalis HOM05M002317 ORTHO05M002464 3.6e-17 91.7 102 42.2
Aco002074 Ananas comosus HOM05M002317 ORTHO05M002464 4.7e-17 91.3 231 31.2
GWHGAORA058503 Cenchrus purpureus HOM05M002317 ORTHO05M002464 1.8e-16 89.4 199 28.6
Ma06_g23920 Musa acuminata HOM05M002317 ORTHO05M002464 5.2e-16 87.8 232 28.9
Solyc07g064370.1 Solanum lycopersicum HOM05M002317 ORTHO05M002464 2.0e-15 85.9 164 38.4
AT1G51538 Arabidopsis thaliana HOM05M002317 ORTHO05M002464 5.8e-15 84.3 219 30.1
GWHGAZTO077193 Oryza alta HOM05M002317 ORTHO05M002464 5.8e-15 84.3 220 28.6
Zosma03g32110 Zostera marina HOM05M002317 ORTHO05M002464 5.8e-15 84.3 230 29.1
GWHGAORA015543 Cenchrus purpureus HOM05M002317 ORTHO05M002464 7.5e-15 84.0 213 27.2
EJB05_13583 Eragrostis curvula HOM05M002317 ORTHO05M002464 1.7e-14 82.8 225 27.6
EJB05_13639 Eragrostis curvula HOM05M002317 ORTHO05M002464 1.7e-14 82.8 225 27.6
OsKitaake03g390001 Oryza sativa Kitaake HOM05M002317 ORTHO05M002464 2.9e-14 82.0 220 28.2
OsR498G0307271600.01 Oryza sativa ssp. indica HOM05M002317 ORTHO05M002464 2.9e-14 82.0 220 28.2
Aco014518 Ananas comosus HOM05M002317 ORTHO05M002464 3.7e-14 81.6 211 30.3
GWHGAZTO027312 Oryza alta HOM05M002317 ORTHO05M002464 8.3e-14 80.5 220 27.7
TraesCS5B03G1014700 Triticum aestivum HOM05M002317 ORTHO05M002464 1.9e-13 79.3 225 26.7
TRITD5Bv1G205390 Triticum turgidum HOM05M002317 ORTHO05M002464 1.9e-13 79.3 225 26.2
TRITD5Bv1G205460 Triticum turgidum HOM05M002317 ORTHO05M002464 1.9e-13 79.3 225 26.7
Zosma05g20220 Zostera marina HOM05M002317 ORTHO05M002464 2.4e-13 79.0 106 39.6
Zm00001eb163540 Zea mays B73 HOM05M002317 ORTHO05M002464 3.2e-13 78.6 225 28.4
Zm00007a00013286 Zea mays B104 HOM05M002317 ORTHO05M002464 3.2e-13 78.6 225 28.4
AET5Gv20936600 Aegilops tauschii HOM05M002317 ORTHO05M002464 4.1e-13 78.2 225 26.7
Pahal.3G253200 Panicum hallii HOM05M002317 ORTHO05M002464 4.1e-13 78.2 227 25.6
TraesCS5D03G0918600 Triticum aestivum HOM05M002317 ORTHO05M002464 4.1e-13 78.2 225 26.7
Dexi3A01G0021880 Digitaria exilis HOM05M002317 ORTHO05M002464 5.4e-13 77.8 225 26.2
Dexi3B01G0022520 Digitaria exilis HOM05M002317 ORTHO05M002464 5.4e-13 77.8 225 26.2
AET2Gv20598100 Aegilops tauschii HOM05M002317 ORTHO05M002464 7.1e-13 77.4 224 26.8
AT1G50830 Arabidopsis thaliana HOM05M002317 ORTHO05M002464 7.1e-13 77.4 220 28.6
Seita.3G218400 Setaria italica HOM05M002317 ORTHO05M002464 7.1e-13 77.4 227 25.1
Sevir.3G223500 Setaria viridis HOM05M002317 ORTHO05M002464 7.1e-13 77.4 227 25.1
TraesCS2D03G0612600 Triticum aestivum HOM05M002317 ORTHO05M002464 7.1e-13 77.4 224 26.8
TraesCS2A03G0619800 Triticum aestivum HOM05M002317 ORTHO05M002464 1.2e-12 76.6 224 26.8
TRITD2Av1G141340 Triticum turgidum HOM05M002317 ORTHO05M002464 1.2e-12 76.6 224 26.8
CALSI_Maker00006365 Calamus simplicifolius HOM05M002317 ORTHO05M002464 1.6e-12 76.3 78 47.4
MisinT154700 Miscanthus sinensis HOM05M002317 ORTHO05M002464 1.6e-12 76.3 225 28.0
Os12g0256800 Oryza sativa ssp. japonica HOM05M002317 ORTHO05M002464 1.6e-12 76.3 110 34.5
GWHGAORA018661 Cenchrus purpureus HOM05M002317 ORTHO05M002464 2.7e-12 75.5 227 28.6
OsR498G1221221500.01 Oryza sativa ssp. indica HOM05M002317 ORTHO05M002464 2.7e-12 75.5 110 34.5
GWHGAORA051949 Cenchrus purpureus HOM05M002317 ORTHO05M002464 3.5e-12 75.1 96 36.5
GWHGASIY008444 Secale cereale HOM05M002317 ORTHO05M002464 3.5e-12 75.1 224 26.3
TRITD5Av1G209060 Triticum turgidum HOM05M002317 ORTHO05M002464 3.5e-12 75.1 97 34.0
Zm00001eb043050 Zea mays B73 HOM05M002317 ORTHO05M002464 4.6e-12 74.7 97 36.1
Zm00007a00013887 Zea mays B104 HOM05M002317 ORTHO05M002464 4.6e-12 74.7 97 36.1
GWHGAZTO066160 Oryza alta HOM05M002317 ORTHO05M002464 6.0e-12 74.3 107 35.5
TraesCS5B03G1014100 Triticum aestivum HOM05M002317 ORTHO05M002464 6.0e-12 74.3 97 32.0
Dexi9A01G0017730 Digitaria exilis HOM05M002317 ORTHO05M002464 7.8e-12 73.9 228 28.1
TRITD5Av1G209040 Triticum turgidum HOM05M002317 ORTHO05M002464 7.8e-12 73.9 88 37.5
Misin15G008600 Miscanthus sinensis HOM05M002317 ORTHO05M002464 1.0e-11 73.6 225 27.6
TraesCS2B03G0740700 Triticum aestivum HOM05M002317 ORTHO05M002464 1.0e-11 73.6 101 35.6
TRITD2Bv1G130980 Triticum turgidum HOM05M002317 ORTHO05M002464 1.0e-11 73.6 101 35.6
GWHGAORA051948 Cenchrus purpureus HOM05M002317 ORTHO05M002464 1.3e-11 73.2 87 40.2
Sobic.008G017900 Sorghum bicolor HOM05M002317 ORTHO05M002464 1.3e-11 73.2 225 27.6
AET5Gv20936200 Aegilops tauschii HOM05M002317 ORTHO05M002464 5.1e-11 71.2 97 33.0
AT1G50790 Arabidopsis thaliana HOM05M002317 ORTHO05M002464 5.1e-11 71.2 108 41.7
TraesCS5D03G0918300 Triticum aestivum HOM05M002317 ORTHO05M002464 5.1e-11 71.2 97 33.0
V3.Lp_chr5_0G4636 Lolium perenne HOM05M002317 ORTHO05M002464 6.6e-11 70.9 136 30.1
Seita.9G185300 Setaria italica HOM05M002317 ORTHO05M002464 6.6e-11 70.9 126 32.5
AT5G18510 Arabidopsis thaliana HOM05M002317 ORTHO05M002464 1.1e-10 70.1 220 30.0
PH02Gene07488 Phyllostachys edulis HOM05M002317 ORTHO05M002464 1.1e-10 70.1 114 31.6
Sspon.01G0022060-2C Saccharum spontaneum HOM05M002317 ORTHO05M002464 1.1e-10 70.1 83 39.8
Sevir.9G184300 Setaria viridis HOM05M002317 ORTHO05M002464 1.1e-10 70.1 126 32.5
GWHGAORA018676 Cenchrus purpureus HOM05M002317 ORTHO05M002464 1.5e-10 69.7 83 41.0
AT1G50820 Arabidopsis thaliana HOM05M002317 ORTHO05M002464 1.9e-10 69.3 92 43.5
Bradi1g59641 Brachypodium distachyon HOM05M002317 ORTHO05M002464 1.9e-10 69.3 222 25.2
Sspon.07G0017250-3D Saccharum spontaneum HOM05M002317 ORTHO05M002464 1.9e-10 69.3 225 26.7
GWHGAZTO025062 Oryza alta HOM05M002317 ORTHO05M002464 2.5e-10 68.9 96 33.3
OsR498G0306392700.01 Oryza sativa ssp. indica HOM05M002317 ORTHO05M002464 3.3e-10 68.6 96 33.3
Os03g0565300 Oryza sativa ssp. japonica HOM05M002317 ORTHO05M002464 3.3e-10 68.6 96 33.3
TraesCS6A03G0090600 Triticum aestivum HOM05M002317 ORTHO05M002464 4.3e-10 68.2 214 27.6
TraesCS6D03G0095800 Triticum aestivum HOM05M002317 ORTHO05M002464 7.3e-10 67.4 214 27.1
V3.Lp_chr7_0.1G5730 Lolium perenne HOM05M002317 ORTHO05M002464 9.5e-10 67.0 138 28.3
Misin07G423300 Miscanthus sinensis HOM05M002317 ORTHO05M002464 1.2e-09 66.6 99 32.3
GWHGAZTO075088 Oryza alta HOM05M002317 ORTHO05M002464 1.2e-09 66.6 95 33.7
Sevir.9G184150 Setaria viridis HOM05M002317 ORTHO05M002464 1.2e-09 66.6 83 39.8
Solyc04g017910.1 Solanum lycopersicum HOM05M002317 ORTHO05M002464 1.2e-09 66.6 37 91.9
TraesCS1B03G0712500 Triticum aestivum HOM05M002317 ORTHO05M002464 2.8e-09 65.5 96 34.4
TRITD1Bv1G142110 Triticum turgidum HOM05M002317 ORTHO05M002464 2.8e-09 65.5 96 34.4
AET1Gv20586800 Aegilops tauschii HOM05M002317 ORTHO05M002464 3.6e-09 65.1 99 34.3
TraesCS1A03G0623700 Triticum aestivum HOM05M002317 ORTHO05M002464 4.7e-09 64.7 96 34.4
TraesCS1D03G0585300 Triticum aestivum HOM05M002317 ORTHO05M002464 4.7e-09 64.7 96 34.4
TRITD1Av1G155280 Triticum turgidum HOM05M002317 ORTHO05M002464 4.7e-09 64.7 96 34.4
GWHGASIY003204 Secale cereale HOM05M002317 ORTHO05M002464 1.1e-08 63.5 96 34.4
GWHGASIY023625 Secale cereale HOM05M002317 ORTHO05M002464 1.1e-08 63.5 87 35.6
GWHGASIY023635 Secale cereale HOM05M002317 ORTHO05M002464 1.1e-08 63.5 87 35.6
GWHGAORA018677 Cenchrus purpureus HOM05M002317 ORTHO05M002464 1.4e-08 63.2 85 34.1
GWHGAZTO025068 Oryza alta HOM05M002317 ORTHO05M002464 1.4e-08 63.2 103 35.0
PH02Gene24809 Phyllostachys edulis HOM05M002317 ORTHO05M002464 1.8e-08 62.8 96 31.2
GWHGAZTO014062 Oryza alta HOM05M002317 ORTHO05M002464 4.0e-08 61.6 87 34.5
GWHGAORA058554 Cenchrus purpureus HOM05M002317 ORTHO05M002464 8.9e-08 60.5 194 24.2
Solyc04g018020.3 Solanum lycopersicum HOM05M002317 ORTHO05M002464 8.9e-08 60.5 35 85.7
OsR498G0306396000.01 Oryza sativa ssp. indica HOM05M002317 ORTHO05M002464 3.4e-07 58.5 94 34.0
Dexi9B01G0017400 Digitaria exilis HOM05M002317 ORTHO05M002464 9.9e-07 57.0 182 29.1
GWHGAZTO075091 Oryza alta HOM05M002317 ORTHO05M002464 9.9e-07 57.0 145 29.0

Aegilops tauschii (4 genes)
Allium sativum (0 genes)
Amborella trichopoda (0 genes)
Ananas comosus (2 genes)
Anthoceros agrestis (0 genes)
Arabidopsis thaliana (8 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (5 genes)
Cenchrus purpureus (8 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (4 genes)
Dioscorea dumetorum (0 genes)
Elaeis guineensis (0 genes)
Eragrostis curvula (2 genes)
Glycine max (0 genes)
Hordeum vulgare (0 genes)
Lolium perenne (2 genes)
Magnolia biondii (0 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (0 genes)
Oryza alta (8 genes)
Oryza brachyantha (0 genes)
Oryza sativa Kitaake (1 genes)
Oryza sativa ssp. indica (4 genes)
Oryza sativa ssp. japonica (2 genes)
Panicum hallii (1 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (0 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (2 genes)
Secale cereale (4 genes)
Selaginella moellendorffii (0 genes)
Sequoiadendron giganteum (0 genes)
Setaria italica (2 genes)
Setaria viridis (3 genes)
Solanum lycopersicum (15 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (12 genes)
Triticum dicoccoides (0 genes)
Triticum turgidum (8 genes)
Vanilla planifolia (1 genes)
Zea mays B73 (2 genes)
Zea mays B104 (2 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (0 genes)

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