Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g007030.3 Solanum lycopersicum HOM05M006939 ORTHO05M008607 3.7e-51 203.8 99 100.0
Potri.012G130600 Populus trichocarpa HOM05M006939 ORTHO05M008607 2.5e-31 137.9 78 83.3
Glyma.16G203100 Glycine max HOM05M006939 ORTHO05M008607 3.3e-31 137.5 76 84.2
Potri.015G132500 Populus trichocarpa HOM05M006939 ORTHO05M008607 9.5e-31 136.0 87 75.9
Glyma.09G152100 Glycine max HOM05M006939 ORTHO05M008607 1.2e-30 135.6 97 67.0
MBI12_g21133_MAGBIO Magnolia biondii HOM05M006939 ORTHO05M008607 1.6e-30 135.2 74 83.8
DDU205G0030 Dioscorea dumetorum HOM05M006939 ORTHO05M008607 4.7e-30 133.7 75 84.0
DDU273G0183 Dioscorea dumetorum HOM05M006939 ORTHO05M008607 4.7e-30 133.7 75 84.0
evm.TU.AsparagusV1_10.587.V1.1 Asparagus officinalis HOM05M006939 ORTHO05M008607 1.2e-28 129.0 106 65.1
Asa1G02685 Allium sativum HOM05M006939 ORTHO05M008607 2.0e-28 128.3 75 80.0
Ma04_g23570 Musa acuminata HOM05M006939 ORTHO05M008607 3.4e-28 127.5 71 83.1
Spipo1G0092600 Spirodela polyrhiza HOM05M006939 ORTHO05M008607 4.4e-28 127.1 76 77.6
p5.00_sc00002_p0393 Elaeis guineensis HOM05M006939 ORTHO05M008607 5.8e-28 126.7 73 82.2
Asa4G05113 Allium sativum HOM05M006939 ORTHO05M008607 7.5e-28 126.3 62 90.3
AT5G51720 Arabidopsis thaliana HOM05M006939 ORTHO05M008607 9.8e-28 125.9 109 61.5
CALSI_Maker00033348 Calamus simplicifolius HOM05M006939 ORTHO05M008607 9.8e-28 125.9 73 80.8
GWHGAZTO043743 Oryza alta HOM05M006939 ORTHO05M008607 9.8e-28 125.9 100 65.0
Aco015545 Ananas comosus HOM05M006939 ORTHO05M008607 1.3e-27 125.6 72 81.9
PH02Gene45970 Phyllostachys edulis HOM05M006939 ORTHO05M008607 1.3e-27 125.6 83 72.3
SEGI_24908 Sequoiadendron giganteum HOM05M006939 ORTHO05M008607 2.2e-27 124.8 82 73.2
Zm00001eb320190 Zea mays B73 HOM05M006939 ORTHO05M008607 3.7e-27 124.0 78 76.9
Zm00007a00035663 Zea mays B104 HOM05M006939 ORTHO05M008607 3.7e-27 124.0 78 76.9
TraesCS5A03G0733100 Triticum aestivum HOM05M006939 ORTHO05M008607 4.9e-27 123.6 75 78.7
Bradi1g28410 Brachypodium distachyon HOM05M006939 ORTHO05M008607 6.4e-27 123.2 80 75.0
Mapoly0132s0038 Marchantia polymorpha HOM05M006939 ORTHO05M008607 6.4e-27 123.2 79 74.7
Sspon.02G0007990-3D Saccharum spontaneum HOM05M006939 ORTHO05M008607 6.4e-27 123.2 78 75.6
Misin03G249400 Miscanthus sinensis HOM05M006939 ORTHO05M008607 8.3e-27 122.9 78 75.6
Sspon.02G0007990-1A Saccharum spontaneum HOM05M006939 ORTHO05M008607 8.3e-27 122.9 78 75.6
Seita.2G309200 Setaria italica HOM05M006939 ORTHO05M008607 8.3e-27 122.9 80 73.8
Sevir.2G320400 Setaria viridis HOM05M006939 ORTHO05M008607 8.3e-27 122.9 85 70.6
EJB05_12790 Eragrostis curvula HOM05M006939 ORTHO05M008607 1.1e-26 122.5 78 75.6
OsKitaake07g135200 Oryza sativa Kitaake HOM05M006939 ORTHO05M008607 1.1e-26 122.5 74 78.4
OsR498G0714258600.01 Oryza sativa ssp. indica HOM05M006939 ORTHO05M008607 1.1e-26 122.5 74 78.4
Os07g0467200 Oryza sativa ssp. japonica HOM05M006939 ORTHO05M008607 1.1e-26 122.5 74 78.4
Sobic.002G297900 Sorghum bicolor HOM05M006939 ORTHO05M008607 1.1e-26 122.5 79 74.7
Ot_Chr7_g13271 Oropetium thomaeum HOM05M006939 ORTHO05M008607 1.4e-26 122.1 78 74.4
Pahal.2G368300 Panicum hallii HOM05M006939 ORTHO05M008607 1.4e-26 122.1 85 70.6
AagrBONN_evm.TU.Sc2ySwM_117.3845 Anthoceros agrestis HOM05M006939 ORTHO05M008607 1.9e-26 121.7 63 87.3
OB07G19700 Oryza brachyantha HOM05M006939 ORTHO05M008607 2.4e-26 121.3 76 75.0
Dexi2A01G0026280 Digitaria exilis HOM05M006939 ORTHO05M008607 4.1e-26 120.6 80 72.5
CDE11G1107 Ceratophyllum demersum HOM05M006939 ORTHO05M008607 5.4e-26 120.2 67 76.1
AET5Gv20695800 Aegilops tauschii HOM05M006939 ORTHO05M008607 9.2e-26 119.4 62 85.5
CDE02G2935 Ceratophyllum demersum HOM05M006939 ORTHO05M008607 9.2e-26 119.4 68 75.0
Horvu_MOREX_5H01G461800 Hordeum vulgare HOM05M006939 ORTHO05M008607 9.2e-26 119.4 62 85.5
TraesCS5B03G0769100 Triticum aestivum HOM05M006939 ORTHO05M008607 9.2e-26 119.4 62 85.5
TRIDC5AG045000 Triticum dicoccoides HOM05M006939 ORTHO05M008607 9.2e-26 119.4 62 85.5
TRIDC5BG048800 Triticum dicoccoides HOM05M006939 ORTHO05M008607 9.2e-26 119.4 62 85.5
TRITD5Av1G173790 Triticum turgidum HOM05M006939 ORTHO05M008607 9.2e-26 119.4 62 85.5
SMO367G0606 Selaginella moellendorffii HOM05M004376 ORTHO05M005413 2.1e-25 118.2 80 70.0
HPP92_007351 Vanilla planifolia HOM05M006939 ORTHO05M008607 2.1e-25 118.2 114 54.4
Pp3c23_14000 Physcomitrium patens HOM05M006939 ORTHO05M008607 3.5e-25 117.5 91 64.8
Zosma01g00160 Zostera marina HOM05M006939 ORTHO05M008607 3.5e-25 117.5 79 67.1
GWHGAORA048603 Cenchrus purpureus HOM05M006939 ORTHO05M008607 4.6e-25 117.1 62 82.3
GWHGAORA007190 Cenchrus purpureus HOM05M006939 ORTHO05M008607 6.0e-25 116.7 75 69.3
Sspon.02G0007990-2C Saccharum spontaneum HOM05M006939 ORTHO05M008607 6.0e-25 116.7 62 82.3
Zosma01g13910 Zostera marina HOM05M006939 ORTHO05M008607 6.0e-25 116.7 97 60.8
Pp3c24_720 Physcomitrium patens HOM05M006939 ORTHO05M008607 2.3e-24 114.8 62 82.3
GWHGAZTO091260 Oryza alta HOM05M006939 ORTHO05M008607 5.6e-23 110.2 97 59.8
GWHGASIY027214 Secale cereale HOM05M006939 ORTHO05M008607 5.6e-23 110.2 63 77.8
Misin04G280300 Miscanthus sinensis HOM05M006939 ORTHO05M008607 9.5e-23 109.4 79 68.4
CBR_g49669 Chara braunii HOM05M006939 ORTHO05M008607 1.2e-22 109.0 65 73.8
Cre01.g050550 Chlamydomonas reinhardtii HOM05M006939 ORTHO05M008607 1.1e-21 105.9 85 60.0
Zjn_sc00001.1.g10625.1.br Zoysia japonica ssp. nagirizaki HOM05M006939 ORTHO05M008607 2.1e-14 81.6 74 56.8
GWHGASIY042673 Secale cereale HOM05M006939 ORTHO05M008607 3.4e-12 74.3 32 93.8
ATR0757G208 Amborella trichopoda HOM05M006939 ORTHO05M008607 3.3e-07 57.8 74 48.6
Sspon.02G0007990-1P Saccharum spontaneum HOM05M006939 ORTHO05M008607 3.6e-06 54.3 46 65.2
Dexi2B01G0024910 Digitaria exilis HOM05M006939 ORTHO05M008607 6.2e-06 53.5 48 62.5


User provided reference genes

Program Settings