Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g066920.3 Solanum lycopersicum HOM05M007852 ORTHO05M010006 3.5e-88 327.4 155 100.0
ATR0177G044 Amborella trichopoda HOM05M007852 ORTHO05M010006 7.6e-35 150.2 98 71.4
MBI16_g10827_MAGBIO Magnolia biondii HOM05M007852 ORTHO05M010006 1.1e-33 146.4 92 69.6
Ma06_g36850 Musa acuminata HOM05M007852 ORTHO05M010006 3.2e-33 144.8 114 62.3
AT5G39210 Arabidopsis thaliana HOM05M007852 ORTHO05M010006 1.2e-32 142.9 147 47.6
DDU565G0267 Dioscorea dumetorum HOM05M007852 ORTHO05M010006 6.0e-32 140.6 135 54.1
Aco004858 Ananas comosus HOM05M007852 ORTHO05M010006 7.9e-32 140.2 97 63.9
OB01G40850 Oryza brachyantha HOM05M007852 ORTHO05M010006 1.8e-31 139.0 92 67.4
Spipo24G0010800 Spirodela polyrhiza HOM05M007852 ORTHO05M010006 1.8e-31 139.0 97 63.9
CDE10G0935 Ceratophyllum demersum HOM05M007852 ORTHO05M010006 3.0e-31 138.3 96 63.5
PH02Gene00767 Phyllostachys edulis HOM05M007852 ORTHO05M010006 3.9e-31 137.9 99 64.6
evm.TU.AsparagusV1_07.2888.V1.1 Asparagus officinalis HOM05M007852 ORTHO05M010006 8.7e-31 136.7 92 65.2
Glyma.19G030200 Glycine max HOM05M007852 ORTHO05M010006 1.1e-30 136.3 139 54.0
p5.00_sc00306_p0016 Elaeis guineensis HOM05M007852 ORTHO05M010006 1.9e-30 135.6 92 67.4
Horvu_MOREX_3H01G445100 Hordeum vulgare HOM05M007852 ORTHO05M010006 2.5e-30 135.2 98 63.3
GWHGASIY016056 Secale cereale HOM05M007852 ORTHO05M010006 2.5e-30 135.2 109 59.6
TraesCS3B03G0849500 Triticum aestivum HOM05M007852 ORTHO05M010006 3.3e-30 134.8 108 61.1
TRITD3Bv1G175450 Triticum turgidum HOM05M007852 ORTHO05M010006 3.3e-30 134.8 108 61.1
Zosma02g22760 Zostera marina HOM05M007852 ORTHO05M010006 3.3e-30 134.8 99 62.6
CALSI_Maker00015453 Calamus simplicifolius HOM05M007852 ORTHO05M010006 4.3e-30 134.4 86 70.9
V3.Lp_chr3_0G16682 Lolium perenne HOM05M007852 ORTHO05M010006 4.3e-30 134.4 88 68.2
TRIDC3AG044340 Triticum dicoccoides HOM05M007852 ORTHO05M010006 4.3e-30 134.4 98 63.3
TRIDC3BG050250 Triticum dicoccoides HOM05M007852 ORTHO05M010006 4.3e-30 134.4 98 63.3
Dexi5A01G0027850 Digitaria exilis HOM05M007852 ORTHO05M010006 5.7e-30 134.0 92 65.2
Pahal.5G148800 Panicum hallii HOM05M007852 ORTHO05M010006 9.7e-30 133.3 130 52.3
Sobic.003G305300 Sorghum bicolor HOM05M007852 ORTHO05M010006 1.3e-29 132.9 88 68.2
Misin06G271200 Miscanthus sinensis HOM05M007852 ORTHO05M010006 2.2e-29 132.1 96 62.5
GWHGAZTO005209 Oryza alta HOM05M001826 ORTHO05M000129 2.2e-29 132.1 85 69.4
Potri.004G120300 Populus trichocarpa HOM05M007852 ORTHO05M010006 2.8e-29 131.7 123 53.7
Sevir.5G331700 Setaria viridis HOM05M007852 ORTHO05M010006 2.8e-29 131.7 97 61.9
Zjn_sc00009.1.g10990.1.am.mk Zoysia japonica ssp. nagirizaki HOM05M007852 ORTHO05M010006 4.8e-29 131.0 86 69.8
Seita.5G327900 Setaria italica HOM05M007852 ORTHO05M010006 8.2e-29 130.2 97 60.8
Ot_Chr3_g12608 Oropetium thomaeum HOM05M007852 ORTHO05M010006 1.4e-28 129.4 96 62.5
OsKitaake01g335700 Oryza sativa Kitaake HOM05M007852 ORTHO05M010006 4.1e-28 127.9 83 67.5
Os01g0763700 Oryza sativa ssp. japonica HOM05M007852 ORTHO05M010006 4.1e-28 127.9 83 67.5
Dexi5B01G0028030 Digitaria exilis HOM05M001826 ORTHO05M000129 5.3e-28 127.5 81 70.4
GWHGAORA031494 Cenchrus purpureus HOM05M001826 ORTHO05M002102 6.9e-28 127.1 106 59.4
GWHGAORA031506 Cenchrus purpureus HOM05M001826 ORTHO05M002102 6.9e-28 127.1 106 59.4
Misin04G085400 Miscanthus sinensis HOM05M007852 ORTHO05M010006 9.0e-28 126.7 88 67.0
Asa2G01307 Allium sativum HOM05M007852 ORTHO05M010006 2.6e-27 125.2 91 63.7
Bradi2g50721 Brachypodium distachyon HOM05M007852 ORTHO05M010006 4.5e-27 124.4 83 66.3
GWHGAORA044903 Cenchrus purpureus HOM05M001826 ORTHO05M002102 4.5e-27 124.4 85 67.1
Sspon.03G0005750-1P Saccharum spontaneum HOM05M007852 ORTHO05M010006 4.5e-27 124.4 84 65.5
Zm00007a00020200 Zea mays B104 HOM05M007852 ORTHO05M010006 2.2e-26 122.1 79 68.4
Misin05G280000 Miscanthus sinensis HOM05M007852 ORTHO05M010006 1.4e-25 119.4 96 59.4
Sspon.03G0005750-1A Saccharum spontaneum HOM05M007852 ORTHO05M010006 7.9e-24 113.6 85 62.4
Sspon.03G0005750-2D Saccharum spontaneum HOM05M000129 ORTHO05M000129 2.3e-23 112.1 76 67.1
Misin03G073500 Miscanthus sinensis HOM05M007852 ORTHO05M010006 5.1e-23 110.9 84 60.7
Mapoly0001s0042 Marchantia polymorpha HOM05M007852 ORTHO05M010006 1.1e-22 109.8 79 60.8
Asa2G01306 Allium sativum HOM05M007852 ORTHO05M010006 2.2e-21 105.5 72 68.1
Pp3c15_1410 Physcomitrium patens HOM05M007852 ORTHO05M010006 6.3e-21 104.0 78 55.1
SEGI_38587 Sequoiadendron giganteum HOM05M007852 ORTHO05M010006 6.3e-21 104.0 123 45.5
CDE10G1057 Ceratophyllum demersum HOM05M000043 ORTHO05M000020 1.4e-20 102.8 77 59.7
Zm00007a00051442 Zea mays B104 HOM05M007852 ORTHO05M010006 2.0e-19 99.0 76 61.8
SMO133G0016 Selaginella moellendorffii HOM05M007852 ORTHO05M010006 3.4e-19 98.2 80 52.5
AagrBONN_evm.TU.Sc2ySwM_362.2072 Anthoceros agrestis HOM05M007852 ORTHO05M010006 4.5e-19 97.8 122 45.1
MBI19_g17444_MAGBIO Magnolia biondii HOM05M000519 ORTHO05M000666 8.2e-13 77.0 47 70.2
Asa3G02887 Allium sativum HOM05M007852 ORTHO05M010006 4.5e-11 71.2 63 54.0
Asa1G04230 Allium sativum HOM05M007852 ORTHO05M010006 6.5e-10 67.4 48 66.7

Aegilops tauschii (0 genes)
Allium sativum (4 genes)
Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Anthoceros agrestis (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus purpureus (3 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (2 genes)
Dioscorea dumetorum (1 genes)
Elaeis guineensis (1 genes)
Eragrostis curvula (0 genes)
Glycine max (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Magnolia biondii (2 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (4 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (1 genes)
Oryza alta (1 genes)
Oryza brachyantha (1 genes)
Oryza sativa Kitaake (1 genes)
Oryza sativa ssp. indica (0 genes)
Oryza sativa ssp. japonica (1 genes)
Panicum hallii (1 genes)
Phyllostachys edulis (1 genes)
Physcomitrium patens (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (3 genes)
Secale cereale (1 genes)
Selaginella moellendorffii (1 genes)
Sequoiadendron giganteum (1 genes)
Setaria italica (1 genes)
Setaria viridis (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (1 genes)
Triticum dicoccoides (2 genes)
Triticum turgidum (1 genes)
Vanilla planifolia (0 genes)
Zea mays B73 (0 genes)
Zea mays B104 (2 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

Program Settings