Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g060580.3 Solanum lycopersicum HOM05M002145 ORTHO05M002274 1.0e-87 325.9 158 100.0
Solyc02g060570.1 Solanum lycopersicum HOM05M002145 ORTHO05M002274 1.5e-75 285.4 177 81.9
Solyc02g061610.1 Solanum lycopersicum HOM05M002145 ORTHO05M002274 1.3e-74 282.3 177 80.2
Solyc02g061670.1 Solanum lycopersicum HOM05M002145 ORTHO05M002274 2.5e-73 278.1 177 79.7
Solyc02g061680.3 Solanum lycopersicum HOM05M002145 ORTHO05M002274 3.6e-72 274.2 177 79.1
Solyc02g061710.2 Solanum lycopersicum HOM05M002145 ORTHO05M002274 3.1e-60 234.6 154 77.3
Solyc02g060600.1 Solanum lycopersicum HOM05M002145 ORTHO05M002274 4.9e-45 184.1 123 75.6
Solyc02g061720.3 Solanum lycopersicum HOM05M002145 ORTHO05M002274 8.6e-34 146.7 86 83.7
Solyc02g082800.3 Solanum lycopersicum HOM05M002145 ORTHO05M002274 5.2e-31 137.5 170 48.2
Glyma.16G118400 Glycine max HOM05M002145 ORTHO05M002274 1.1e-25 119.8 164 45.7
Solyc03g032160.3 Solanum lycopersicum HOM05M002145 ORTHO05M002274 5.6e-25 117.5 168 44.0
V3.Lp_chr4_0G27246 Lolium perenne HOM05M002145 ORTHO05M002274 3.6e-24 114.8 165 47.3
Pahal.9G399500 Panicum hallii HOM05M002145 ORTHO05M002274 3.6e-24 114.8 175 42.3
Sspon.01G0034570-1P Saccharum spontaneum HOM05M002145 ORTHO05M002274 1.4e-23 112.8 175 40.0
Sspon.01G0034570-2C Saccharum spontaneum HOM05M002145 ORTHO05M002274 1.4e-23 112.8 175 40.0
Sspon.01G0034570-1B Saccharum spontaneum HOM05M002145 ORTHO05M002274 1.8e-23 112.5 175 40.0
Sspon.01G0034570-3D Saccharum spontaneum HOM05M002145 ORTHO05M002274 1.8e-23 112.5 175 40.0
Sobic.001G517500 Sorghum bicolor HOM05M002145 ORTHO05M002274 2.3e-23 112.1 178 41.0
Misin02G504200 Miscanthus sinensis HOM05M002145 ORTHO05M002274 3.1e-23 111.7 177 42.4
AET1Gv20520300 Aegilops tauschii HOM05M002145 ORTHO05M002274 8.9e-23 110.2 170 42.9
DDU469G0424 Dioscorea dumetorum HOM05M002145 ORTHO05M002274 8.9e-23 110.2 167 41.3
TraesCS1D03G0521900 Triticum aestivum HOM05M002145 ORTHO05M002274 8.9e-23 110.2 170 42.9
Dexi9A01G0030080 Digitaria exilis HOM05M002145 ORTHO05M002274 2.0e-22 109.0 173 41.0
DexiUA01G0019640 Digitaria exilis HOM05M002145 ORTHO05M002274 2.0e-22 109.0 173 41.0
Glyma.11G084700 Glycine max HOM05M002145 ORTHO05M002274 3.4e-22 108.2 152 44.7
GWHGAORA028214 Cenchrus purpureus HOM05M002145 ORTHO05M002274 4.4e-22 107.8 172 40.1
MBI05_g12023_MAGBIO Magnolia biondii HOM05M002145 ORTHO05M002274 4.4e-22 107.8 166 42.2
Zm00001eb002530 Zea mays B73 HOM05M002145 ORTHO05M002274 4.4e-22 107.8 175 38.9
Zm00007a00019465 Zea mays B104 HOM05M002145 ORTHO05M002274 4.4e-22 107.8 175 38.9
CDE05G0952 Ceratophyllum demersum HOM05M002145 ORTHO05M002274 5.8e-22 107.5 182 39.0
Misin02G283300 Miscanthus sinensis HOM05M002145 ORTHO05M002274 5.8e-22 107.5 150 44.0
Glyma.02G041700 Glycine max HOM05M002145 ORTHO05M002274 9.9e-22 106.7 156 42.3
Dexi9B01G0028970 Digitaria exilis HOM05M002145 ORTHO05M002274 1.3e-21 106.3 172 41.3
Sspon.01G0013740-1A Saccharum spontaneum HOM05M002145 ORTHO05M002274 1.3e-21 106.3 151 44.4
GWHGAORA052966 Cenchrus purpureus HOM05M002145 ORTHO05M002274 1.7e-21 105.9 172 40.1
Potri.004G205100 Populus trichocarpa HOM05M002145 ORTHO05M002274 2.9e-21 105.1 172 39.0
Horvu_MOREX_1H01G331900 Hordeum vulgare HOM05M002145 ORTHO05M002274 3.7e-21 104.8 164 42.1
Misin01G174100 Miscanthus sinensis HOM05M002145 ORTHO05M002274 3.7e-21 104.8 149 44.3
Sspon.01G0013740-3C Saccharum spontaneum HOM05M002145 ORTHO05M002274 3.7e-21 104.8 149 44.3
Zm00007a00018008 Zea mays B104 HOM05M002145 ORTHO05M002274 3.7e-21 104.8 181 37.6
p5.00_sc00191_p0001 Elaeis guineensis HOM05M002145 ORTHO05M002274 4.9e-21 104.4 157 43.9
Sspon.01G0013740-2B Saccharum spontaneum HOM05M002145 ORTHO05M002274 4.9e-21 104.4 151 43.7
Zm00001eb022400 Zea mays B73 HOM05M002145 ORTHO05M002274 4.9e-21 104.4 183 36.6
Zm00007a00051149 Zea mays B104 HOM05M002145 ORTHO05M002274 4.9e-21 104.4 183 36.6
Pahal.9G617600 Panicum hallii HOM05M002145 ORTHO05M002274 6.4e-21 104.0 162 42.6
Zm00001eb393840 Zea mays B73 HOM05M002145 ORTHO05M002274 6.4e-21 104.0 180 37.8
Glyma.01G159500 Glycine max HOM05M002145 ORTHO05M002274 1.1e-20 103.2 146 45.2
Ot_Chr4_g22643 Oropetium thomaeum HOM05M002145 ORTHO05M002274 1.1e-20 103.2 161 41.6
PH02Gene34257 Phyllostachys edulis HOM05M002145 ORTHO05M002274 1.4e-20 102.8 166 42.8
Bradi1g76321 Brachypodium distachyon HOM05M002145 ORTHO05M002274 1.9e-20 102.4 161 45.3
EJB05_23559 Eragrostis curvula HOM05M002145 ORTHO05M002274 4.1e-20 101.3 163 40.5
CALSI_Maker00038166 Calamus simplicifolius HOM05M002145 ORTHO05M002274 7.1e-20 100.5 164 42.1
PH02Gene38029 Phyllostachys edulis HOM05M002145 ORTHO05M002274 7.1e-20 100.5 159 40.3
OB04G19160 Oryza brachyantha HOM05M002145 ORTHO05M002274 9.2e-20 100.1 169 39.1
OsKitaake03g026800 Oryza sativa Kitaake HOM05M002145 ORTHO05M002274 9.2e-20 100.1 159 43.4
Os03g0131300 Oryza sativa ssp. japonica HOM05M002145 ORTHO05M002274 9.2e-20 100.1 159 43.4
OsR498G0305175200.01 Oryza sativa ssp. indica HOM05M002145 ORTHO05M002274 1.6e-19 99.4 159 43.4
Seita.9G552700 Setaria italica HOM05M002145 ORTHO05M002274 1.6e-19 99.4 162 40.7
Sevir.9G557000 Setaria viridis HOM05M002145 ORTHO05M002274 1.6e-19 99.4 162 40.7
TraesCS1A03G0541300 Triticum aestivum HOM05M002145 ORTHO05M002274 1.6e-19 99.4 170 40.0
TRIDC1AG030700 Triticum dicoccoides HOM05M002145 ORTHO05M002274 1.6e-19 99.4 170 40.0
TRITD1Av1G132620 Triticum turgidum HOM05M002145 ORTHO05M002274 1.6e-19 99.4 170 40.0
GWHGAZTO000330 Oryza alta HOM05M002145 ORTHO05M002274 2.7e-19 98.6 160 43.1
OsKitaake10g177700 Oryza sativa Kitaake HOM05M002145 ORTHO05M002274 4.6e-19 97.8 159 39.0
OsR498G1019122600.01 Oryza sativa ssp. indica HOM05M002145 ORTHO05M002274 4.6e-19 97.8 159 39.0
Os10g0542200 Oryza sativa ssp. japonica HOM05M002145 ORTHO05M002274 4.6e-19 97.8 159 39.0
GWHGAZTO009614 Oryza alta HOM05M002145 ORTHO05M002274 6.0e-19 97.4 161 38.5
CDE05G1971 Ceratophyllum demersum HOM05M002145 ORTHO05M002274 7.8e-19 97.1 177 38.4
MBI08_g12716_MAGBIO Magnolia biondii HOM05M002145 ORTHO05M002274 7.8e-19 97.1 161 41.6
GWHGAZTO021964 Oryza alta HOM05M002145 ORTHO05M002274 7.8e-19 97.1 162 41.4
OB04G19110 Oryza brachyantha HOM05M002145 ORTHO05M002274 1.0e-18 96.7 169 38.5
Sobic.001G311100 Sorghum bicolor HOM05M002145 ORTHO05M002274 1.0e-18 96.7 151 41.1
CALSI_Maker00022347 Calamus simplicifolius HOM05M002145 ORTHO05M002274 1.3e-18 96.3 162 40.1
GWHGAZTO061899 Oryza alta HOM05M002145 ORTHO05M002274 1.3e-18 96.3 161 38.5
Seita.9G339700 Setaria italica HOM05M002145 ORTHO05M002274 1.3e-18 96.3 160 41.9
Sevir.9G343800 Setaria viridis HOM05M002145 ORTHO05M002274 1.3e-18 96.3 160 41.9
Ot_Chr1_gn31038 Oropetium thomaeum HOM05M002145 ORTHO05M002274 1.7e-18 95.9 163 38.0
OB10G24380 Oryza brachyantha HOM05M002145 ORTHO05M002274 1.7e-18 95.9 162 40.1
PH02Gene00831 Phyllostachys edulis HOM05M002145 ORTHO05M002274 1.7e-18 95.9 163 42.3
Potri.009G166000 Populus trichocarpa HOM05M002145 ORTHO05M002274 1.7e-18 95.9 147 43.5
EJB05_23560 Eragrostis curvula HOM05M002145 ORTHO05M002274 3.0e-18 95.1 163 39.9
Spipo11G0046000 Spirodela polyrhiza HOM05M002145 ORTHO05M002274 3.9e-18 94.7 157 41.4
Dexi9A01G0048070 Digitaria exilis HOM05M002145 ORTHO05M002274 5.1e-18 94.4 160 40.6
Dexi9B01G0047480 Digitaria exilis HOM05M002145 ORTHO05M002274 5.1e-18 94.4 160 40.6
HPP92_002452 Vanilla planifolia HOM05M002145 ORTHO05M002274 5.1e-18 94.4 160 44.4
HPP92_022691 Vanilla planifolia HOM05M002145 ORTHO05M002274 5.1e-18 94.4 167 40.1
CALSI_Maker00010979 Calamus simplicifolius HOM05M002145 ORTHO05M002274 6.6e-18 94.0 160 37.5
GWHGAORA054293 Cenchrus purpureus HOM05M002145 ORTHO05M002274 6.6e-18 94.0 162 41.4
Aco011953 Ananas comosus HOM05M002145 ORTHO05M002274 8.6e-18 93.6 158 41.1
GWHGASIY002504 Secale cereale HOM05M002145 ORTHO05M002274 8.6e-18 93.6 171 40.4
Misin01G495800 Miscanthus sinensis HOM05M002145 ORTHO05M002274 2.5e-17 92.0 175 37.1
AT2G17200 Arabidopsis thaliana HOM05M002145 ORTHO05M002274 5.6e-17 90.9 154 40.3
Zm00007a00048267 Zea mays B104 HOM05M002145 ORTHO05M002274 5.6e-17 90.9 167 39.5
Dexi9B01G0047470 Digitaria exilis HOM05M002145 ORTHO05M002274 9.6e-17 90.1 160 40.0
Bradi1g76314 Brachypodium distachyon HOM05M002145 ORTHO05M002274 1.2e-16 89.7 163 41.7
Ma04_g22550 Musa acuminata HOM05M002145 ORTHO05M002274 1.2e-16 89.7 169 38.5
EJB05_08128 Eragrostis curvula HOM05M002145 ORTHO05M002274 1.6e-16 89.4 149 41.6
DDU543G0005 Dioscorea dumetorum HOM05M002145 ORTHO05M002274 1.4e-15 86.3 159 38.4
DDU689G0028 Dioscorea dumetorum HOM05M002145 ORTHO05M002274 1.4e-15 86.3 159 38.4
Dexi9A01G0048060 Digitaria exilis HOM05M002145 ORTHO05M002274 1.8e-15 85.9 154 39.6
ATR0661G083 Amborella trichopoda HOM05M002145 ORTHO05M002274 2.4e-15 85.5 166 38.0
p5.00_sc00013_p0234 Elaeis guineensis HOM05M002145 ORTHO05M002274 2.4e-15 85.5 170 35.9
AT2G17190 Arabidopsis thaliana HOM05M002145 ORTHO05M002274 3.1e-15 85.1 136 44.1
p5.00_sc00098_p0006 Elaeis guineensis HOM05M002145 ORTHO05M002274 6.8e-15 84.0 160 38.1
Zosma04g21410 Zostera marina HOM05M002145 ORTHO05M002274 6.8e-15 84.0 166 39.2
Ma03_g00450 Musa acuminata HOM05M002145 ORTHO05M002274 8.9e-15 83.6 164 36.0
TraesCS4D03G0753000 Triticum aestivum HOM05M002145 ORTHO05M002274 1.2e-14 83.2 147 42.9
Ma01_g08450 Musa acuminata HOM05M002145 ORTHO05M002274 3.4e-14 81.6 173 35.3
AET4Gv20771300 Aegilops tauschii HOM05M002145 ORTHO05M002274 4.4e-14 81.3 147 42.2
GWHGASIY026450 Secale cereale HOM05M002145 ORTHO05M002274 4.4e-14 81.3 147 42.2
SEGI_13419 Sequoiadendron giganteum HOM05M002145 ORTHO05M002274 4.4e-14 81.3 147 38.8
TraesCS4B03G0844500 Triticum aestivum HOM05M002145 ORTHO05M002274 4.4e-14 81.3 147 42.2
TraesCS5A03G1166900 Triticum aestivum HOM05M002145 ORTHO05M002274 4.4e-14 81.3 147 42.2
TRIDC4BG054760 Triticum dicoccoides HOM05M002145 ORTHO05M002274 4.4e-14 81.3 147 42.2
TRIDC5AG070860 Triticum dicoccoides HOM05M002145 ORTHO05M002274 4.4e-14 81.3 147 42.2
TRITD5Av1G239730 Triticum turgidum HOM05M002145 ORTHO05M002274 4.4e-14 81.3 147 42.2
GWHGASIY029786 Secale cereale HOM05M002145 ORTHO05M002274 7.6e-14 80.5 147 43.5
EJB05_28847 Eragrostis curvula HOM05M002145 ORTHO05M002274 1.3e-13 79.7 173 35.3
TRIDC1BG036210 Triticum dicoccoides HOM05M002145 ORTHO05M002274 1.7e-13 79.3 179 34.6
Zosma06g28650 Zostera marina HOM05M002145 ORTHO05M002274 1.7e-13 79.3 141 36.9
Horvu_MOREX_4H01G484200 Hordeum vulgare HOM05M002145 ORTHO05M002274 2.9e-13 78.6 150 42.0
Zm00001eb402540 Zea mays B73 HOM05M002145 ORTHO05M002274 2.9e-13 78.6 166 35.5
Pp3c12_13580 Physcomitrium patens HOM05M002145 ORTHO05M002274 3.8e-13 78.2 134 40.3
CALSI_Maker00046472 Calamus simplicifolius HOM05M000205 ORTHO05M002274 4.9e-13 77.8 105 43.8
TRITD4Bv1G185240 Triticum turgidum HOM05M002145 ORTHO05M002274 4.9e-13 77.8 139 42.4
evm.TU.AsparagusV1_01.1056.V1.1 Asparagus officinalis HOM05M002145 ORTHO05M002274 8.4e-13 77.0 162 35.2
Pp3c4_6720 Physcomitrium patens HOM05M002145 ORTHO05M002274 2.4e-12 75.5 130 41.5
Pp3c4_6722 Physcomitrium patens HOM05M002145 ORTHO05M002274 2.4e-12 75.5 130 41.5
CBR_g54797 Chara braunii HOM05M002145 ORTHO05M002274 3.2e-12 75.1 160 35.0
TraesCS1B03G0630700 Triticum aestivum HOM05M002145 ORTHO05M002274 3.2e-12 75.1 172 34.9
TRITD1Bv1G127150 Triticum turgidum HOM05M002145 ORTHO05M002274 3.2e-12 75.1 172 34.9
Ma05_g10850 Musa acuminata HOM05M002145 ORTHO05M002274 7.1e-12 73.9 154 39.0
Potri.005G100200 Populus trichocarpa HOM05M002145 ORTHO05M002274 2.1e-11 72.4 165 37.6
Asa2G01626 Allium sativum HOM05M002145 ORTHO05M002274 4.6e-11 71.2 147 36.1
Asa7G03127 Allium sativum HOM05M002145 ORTHO05M002274 4.6e-11 71.2 62 56.5
CDE04G0090 Ceratophyllum demersum HOM05M002145 ORTHO05M002274 6.0e-11 70.9 157 35.7
Pp3c8_4020 Physcomitrium patens HOM05M002145 ORTHO05M002274 3.0e-10 68.6 112 42.9
CALSI_Maker00037566 Calamus simplicifolius HOM05M002145 ORTHO05M002274 3.9e-10 68.2 162 34.0
CALSI_Maker00036190 Calamus simplicifolius HOM05M002145 ORTHO05M002274 6.6e-10 67.4 75 44.0
Mapoly0065s0073 Marchantia polymorpha HOM05M002145 ORTHO05M002274 6.6e-10 67.4 90 47.8
evm.TU.AsparagusV1_07.2371.V1.1 Asparagus officinalis HOM05M002145 ORTHO05M002274 8.7e-10 67.0 162 33.3
PRCOL_00001915 Prasinoderma coloniale HOM05M002145 ORTHO05M002274 4.3e-09 64.7 119 35.3
Cre15.g637100 Chlamydomonas reinhardtii HOM05M002145 ORTHO05M002274 1.2e-06 56.6 83 34.9
Ma07_g04170 Musa acuminata HOM05M002145 ORTHO05M002274 1.5e-06 56.2 165 32.1
CDE02G2418 Ceratophyllum demersum HOM05M002145 ORTHO05M002274 2.6e-06 55.5 119 36.1
p5.00_sc00014_p0175 Elaeis guineensis HOM05M002145 ORTHO05M002274 9.9e-06 53.5 161 31.7

Aegilops tauschii (2 genes)
Allium sativum (2 genes)
Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Anthoceros agrestis (0 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (6 genes)
Cenchrus purpureus (3 genes)
Ceratophyllum demersum (4 genes)
Chara braunii (1 genes)
Chlamydomonas reinhardtii (1 genes)
Digitaria exilis (7 genes)
Dioscorea dumetorum (3 genes)
Elaeis guineensis (4 genes)
Eragrostis curvula (4 genes)
Glycine max (4 genes)
Hordeum vulgare (2 genes)
Lolium perenne (1 genes)
Magnolia biondii (2 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (4 genes)
Musa acuminata (5 genes)
Oropetium thomaeum (2 genes)
Oryza alta (4 genes)
Oryza brachyantha (3 genes)
Oryza sativa Kitaake (2 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (2 genes)
Panicum hallii (2 genes)
Phyllostachys edulis (3 genes)
Physcomitrium patens (4 genes)
Populus trichocarpa (3 genes)
Prasinoderma coloniale (1 genes)
Saccharum spontaneum (7 genes)
Secale cereale (3 genes)
Selaginella moellendorffii (0 genes)
Sequoiadendron giganteum (1 genes)
Setaria italica (2 genes)
Setaria viridis (2 genes)
Solanum lycopersicum (10 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (6 genes)
Triticum dicoccoides (4 genes)
Triticum turgidum (4 genes)
Vanilla planifolia (2 genes)
Zea mays B73 (4 genes)
Zea mays B104 (4 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (0 genes)

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