Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g021350.4 Solanum lycopersicum HOM05M002286 ORTHO05M002664 8.3e-177 622.9 319 100.0
AT1G74560 Arabidopsis thaliana HOM05M002286 ORTHO05M002664 4.3e-48 195.3 226 48.7
Potri.012G069100 Populus trichocarpa HOM05M002286 ORTHO05M002664 5.6e-48 194.9 233 48.1
Glyma.04G170400 Glycine max HOM05M002286 ORTHO05M002664 2.8e-47 192.6 216 50.5
evm.TU.AsparagusV1_03.1699.V1.1 Asparagus officinalis HOM05M002286 ORTHO05M002664 4.7e-47 191.8 221 49.3
Glyma.17G099200 Glycine max HOM05M002286 ORTHO05M002664 1.4e-46 190.3 215 49.8
Glyma.06G193200 Glycine max HOM05M002286 ORTHO05M002664 2.3e-46 189.5 218 50.9
Potri.015G062700 Populus trichocarpa HOM05M002286 ORTHO05M002664 6.8e-46 188.0 233 46.4
evm.TU.AsparagusV1_07.3521.V1.1 Asparagus officinalis HOM05M002286 ORTHO05M002664 4.4e-45 185.3 221 48.4
Potri.017G080700 Populus trichocarpa HOM05M002286 ORTHO05M002664 5.8e-45 184.9 221 48.0
Asa0G05286 Allium sativum HOM05M002286 ORTHO05M002664 7.5e-45 184.5 222 47.3
DDU049G0046 Dioscorea dumetorum HOM05M002286 ORTHO05M002664 7.5e-45 184.5 222 46.4
Glyma.05G027300 Glycine max HOM05M002286 ORTHO05M002664 7.5e-45 184.5 215 48.4
Ma07_g22530 Musa acuminata HOM05M002286 ORTHO05M002664 7.5e-45 184.5 225 44.9
AT1G18800 Arabidopsis thaliana HOM05M002286 ORTHO05M002664 9.8e-45 184.1 227 46.3
Ma10_g18780 Musa acuminata HOM05M002286 ORTHO05M002664 2.9e-44 182.6 220 46.4
SEGI_14395 Sequoiadendron giganteum HOM05M002286 ORTHO05M002664 2.9e-44 182.6 212 47.6
Solyc06g069890.4 Solanum lycopersicum HOM05M002286 ORTHO05M002664 2.9e-44 182.6 215 48.8
ATR0307G045 Amborella trichopoda HOM05M002286 ORTHO05M002664 4.9e-44 181.8 218 48.2
CALSI_Maker00039705 Calamus simplicifolius HOM05M002286 ORTHO05M002664 6.4e-44 181.4 212 48.1
Ma04_g00470 Musa acuminata HOM05M002286 ORTHO05M002664 6.4e-44 181.4 212 47.2
CALSI_Maker00002238 Calamus simplicifolius HOM05M002286 ORTHO05M002664 1.4e-43 180.3 224 46.0
MBI02_g23684_MAGBIO Magnolia biondii HOM05M002286 ORTHO05M002664 1.4e-43 180.3 230 46.5
Ma06_g12150 Musa acuminata HOM05M002286 ORTHO05M002664 1.4e-43 180.3 210 47.6
SEGI_05816 Sequoiadendron giganteum HOM05M002286 ORTHO05M002664 1.4e-43 180.3 205 48.8
Aco014705 Ananas comosus HOM05M002286 ORTHO05M002664 4.1e-43 178.7 203 49.3
MBI05_g35445_MAGBIO Magnolia biondii HOM05M002286 ORTHO05M002664 4.1e-43 178.7 208 48.6
ATR0564G339 Amborella trichopoda HOM05M002286 ORTHO05M002664 7.0e-43 177.9 227 44.9
p5.00_sc00149_p0005 Elaeis guineensis HOM05M002286 ORTHO05M002664 1.2e-42 177.2 224 45.5
PH02Gene44771 Phyllostachys edulis HOM05M002286 ORTHO05M002664 3.5e-42 175.6 218 46.8
p5.00_sc00054_p0114 Elaeis guineensis HOM05M002286 ORTHO05M002664 6.0e-42 174.9 226 45.6
Spipo4G0022900 Spirodela polyrhiza HOM05M002286 ORTHO05M002664 1.0e-41 174.1 212 46.2
PH02Gene02215 Phyllostachys edulis HOM05M002286 ORTHO05M002664 1.7e-41 173.3 217 44.2
CDE05G2164 Ceratophyllum demersum HOM05M002286 ORTHO05M002664 2.3e-41 172.9 207 46.4
Horvu_MOREX_6H01G307400 Hordeum vulgare HOM05M002286 ORTHO05M002664 2.3e-41 172.9 218 45.4
V3.Lp_chr4_0G20320 Lolium perenne HOM05M002286 ORTHO05M002664 2.3e-41 172.9 214 46.3
GWHGASIY031959 Secale cereale HOM05M002286 ORTHO05M002664 2.3e-41 172.9 218 45.4
TraesCS6A03G0543700 Triticum aestivum HOM05M002286 ORTHO05M002664 2.3e-41 172.9 218 45.4
TraesCS6D03G0457500 Triticum aestivum HOM05M002286 ORTHO05M002664 2.3e-41 172.9 218 45.4
TRIDC6AG030990 Triticum dicoccoides HOM05M002286 ORTHO05M002664 2.3e-41 172.9 218 45.4
TRIDC6BG038130 Triticum dicoccoides HOM05M002286 ORTHO05M002664 2.3e-41 172.9 218 45.4
Bradi3g46800 Brachypodium distachyon HOM05M002286 ORTHO05M002664 3.0e-41 172.6 223 44.8
Potri.004G128701 Populus trichocarpa HOM05M002286 ORTHO05M002664 3.0e-41 172.6 207 49.3
AagrBONN_evm.TU.Sc2ySwM_228.3766 Anthoceros agrestis HOM05M002286 ORTHO05M002664 5.0e-41 171.8 223 44.8
Aco009603 Ananas comosus HOM05M002286 ORTHO05M002664 8.6e-41 171.0 221 45.7
PH02Gene24995 Phyllostachys edulis HOM05M002286 ORTHO05M002664 1.1e-40 170.6 214 46.3
AET6Gv20519800 Aegilops tauschii HOM05M002286 ORTHO05M002664 1.9e-40 169.9 207 46.4
GWHGAORA059569 Cenchrus purpureus HOM05M002286 ORTHO05M002664 2.5e-40 169.5 214 47.7
GWHGAZTO019182 Oryza alta HOM05M002286 ORTHO05M002664 2.5e-40 169.5 218 45.0
Zm00001eb183010 Zea mays B73 HOM05M002286 ORTHO05M002664 2.5e-40 169.5 215 47.9
Zm00007a00023473 Zea mays B104 HOM05M002286 ORTHO05M002664 2.5e-40 169.5 215 47.9
EJB05_21118 Eragrostis curvula HOM05M002286 ORTHO05M002664 3.3e-40 169.1 218 45.9
GWHGAZTO070789 Oryza alta HOM05M002286 ORTHO05M002664 3.3e-40 169.1 218 44.5
OsKitaake02g219300 Oryza sativa Kitaake HOM05M002286 ORTHO05M002664 3.3e-40 169.1 218 44.5
Os02g0576700 Oryza sativa ssp. japonica HOM05M002286 ORTHO05M002664 3.3e-40 169.1 218 44.5
Sspon.04G0009800-1A Saccharum spontaneum HOM05M002286 ORTHO05M002664 3.3e-40 169.1 215 47.9
Sspon.04G0009800-3C Saccharum spontaneum HOM05M002286 ORTHO05M002664 3.3e-40 169.1 215 47.9
Sspon.04G0009800-4D Saccharum spontaneum HOM05M002286 ORTHO05M002664 3.3e-40 169.1 215 47.9
Ot_Chr1_g02549 Oropetium thomaeum HOM05M002286 ORTHO05M002664 4.3e-40 168.7 214 45.8
OsR498G0204170600.01 Oryza sativa ssp. indica HOM05M002286 ORTHO05M002664 4.3e-40 168.7 218 45.0
GWHGAORA024131 Cenchrus purpureus HOM05M002286 ORTHO05M002664 5.6e-40 168.3 214 47.2
V3.Lp_chr2_0G21846 Lolium perenne HOM05M002286 ORTHO05M002664 5.6e-40 168.3 214 42.1
Seita.1G207100 Setaria italica HOM05M002286 ORTHO05M002664 5.6e-40 168.3 214 47.2
Sevir.1G210600 Setaria viridis HOM05M002286 ORTHO05M002664 5.6e-40 168.3 214 47.2
Sspon.04G0009800-2B Saccharum spontaneum HOM05M002286 ORTHO05M002664 7.3e-40 167.9 215 47.4
Sobic.004G190600 Sorghum bicolor HOM05M002286 ORTHO05M002664 7.3e-40 167.9 215 47.4
OB02G29130 Oryza brachyantha HOM05M002286 ORTHO05M002664 9.5e-40 167.5 217 44.2
Zjn_sc00020.1.g00220.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M002286 ORTHO05M002664 9.5e-40 167.5 214 46.3
Solyc02g067370.4 Solanum lycopersicum HOM05M002286 ORTHO05M002664 1.2e-39 167.2 195 48.2
Pahal.1G279600 Panicum hallii HOM05M002286 ORTHO05M002664 1.6e-39 166.8 215 46.5
Zm00001eb244920 Zea mays B73 HOM05M002286 ORTHO05M002664 1.6e-39 166.8 215 47.4
TraesCS2A03G0805000 Triticum aestivum HOM05M002286 ORTHO05M002664 2.1e-39 166.4 237 41.4
TRITD2Av1G198940 Triticum turgidum HOM05M002286 ORTHO05M002664 2.1e-39 166.4 237 41.4
Pp3c18_15740 Physcomitrium patens HOM05M002286 ORTHO05M002664 2.8e-39 166.0 224 43.3
HPP92_013055 Vanilla planifolia HOM05M002286 ORTHO05M002664 3.6e-39 165.6 235 43.0
GWHGASIY009163 Secale cereale HOM05M002286 ORTHO05M002664 4.7e-39 165.2 237 40.9
TRIDC2BG049930 Triticum dicoccoides HOM05M002286 ORTHO05M002664 4.7e-39 165.2 249 40.6
TraesCS2D03G0745100 Triticum aestivum HOM05M002286 ORTHO05M002664 6.2e-39 164.9 237 40.9
GWHGAZTO079607 Oryza alta HOM05M002286 ORTHO05M002664 1.1e-38 164.1 203 43.3
TraesCS2B03G0889600 Triticum aestivum HOM05M002286 ORTHO05M002664 1.1e-38 164.1 238 40.8
TRITD2Bv1G162180 Triticum turgidum HOM05M002286 ORTHO05M002664 1.1e-38 164.1 238 40.8
CDE04G2856 Ceratophyllum demersum HOM05M002286 ORTHO05M002664 1.4e-38 163.7 218 40.4
OsKitaake04g154800 Oryza sativa Kitaake HOM05M002286 ORTHO05M002664 1.8e-38 163.3 203 43.3
OsR498G0408696800.01 Oryza sativa ssp. indica HOM05M002286 ORTHO05M002664 1.8e-38 163.3 203 43.3
Os04g0459700 Oryza sativa ssp. japonica HOM05M002286 ORTHO05M002664 1.8e-38 163.3 203 43.3
Zm00007a00007813 Zea mays B104 HOM05M002286 ORTHO05M002664 2.3e-38 162.9 208 48.1
Asa0G02911 Allium sativum HOM05M002286 ORTHO05M002664 4.0e-38 162.2 216 44.9
Asa2G00778 Allium sativum HOM05M002286 ORTHO05M002664 4.0e-38 162.2 216 44.9
Mapoly0024s0061 Marchantia polymorpha HOM05M002286 ORTHO05M002664 4.0e-38 162.2 218 43.1
OB04G22220 Oryza brachyantha HOM05M002286 ORTHO05M002664 5.2e-38 161.8 217 41.9
GWHGAORA023985 Cenchrus purpureus HOM05M002286 ORTHO05M002664 6.8e-38 161.4 214 42.5
Dexi7B01G0009650 Digitaria exilis HOM05M002286 ORTHO05M002664 2.0e-37 159.8 203 42.9
GWHGAZTO029913 Oryza alta HOM05M002286 ORTHO05M002664 2.0e-37 159.8 203 42.9
Bradi5g12347 Brachypodium distachyon HOM05M002286 ORTHO05M002664 2.6e-37 159.5 239 40.6
CDE02G1708 Ceratophyllum demersum HOM05M002286 ORTHO05M002664 2.6e-37 159.5 218 39.9
p5.00_sc00049_p0017 Elaeis guineensis HOM05M002286 ORTHO05M002664 2.6e-37 159.5 226 43.4
AET2Gv20734400 Aegilops tauschii HOM05M002286 ORTHO05M002664 3.4e-37 159.1 227 41.0
GWHGASIY009160 Secale cereale HOM05M002286 ORTHO05M002664 4.4e-37 158.7 254 38.2
Horvu_MOREX_2H01G480300 Hordeum vulgare HOM05M002286 ORTHO05M002664 9.8e-37 157.5 249 38.2
Seita.7G123700 Setaria italica HOM05M002286 ORTHO05M002664 9.8e-37 157.5 203 42.4
evm.TU.AsparagusV1_07.3938.V1.1 Asparagus officinalis HOM05M002286 ORTHO05M002664 1.3e-36 157.1 186 47.3
Sspon.04G0009800-1P Saccharum spontaneum HOM05M002286 ORTHO05M002664 1.7e-36 156.8 214 40.7
Sevir.7G132000 Setaria viridis HOM05M002286 ORTHO05M002664 2.2e-36 156.4 203 42.4
p5.00_sc00035_p0051 Elaeis guineensis HOM05M002286 ORTHO05M002664 2.9e-36 156.0 184 48.4
EJB05_37636 Eragrostis curvula HOM05M002286 ORTHO05M002664 2.9e-36 156.0 203 42.4
EJB05_37703 Eragrostis curvula HOM05M002286 ORTHO05M002664 3.7e-36 155.6 203 42.4
Misin12G105400 Miscanthus sinensis HOM05M002286 ORTHO05M002664 1.4e-35 153.7 214 39.7
DDU049G0133 Dioscorea dumetorum HOM05M002286 ORTHO05M002664 2.4e-35 152.9 239 40.6
Sobic.006G106200 Sorghum bicolor HOM05M002286 ORTHO05M002664 3.2e-35 152.5 214 39.3
Misin11G094500 Miscanthus sinensis HOM05M002286 ORTHO05M002664 1.2e-34 150.6 217 39.2
Pahal.7G177100 Panicum hallii HOM05M002286 ORTHO05M002664 1.6e-34 150.2 203 41.9
SMO119G0206 Selaginella moellendorffii HOM05M002286 ORTHO05M002664 2.7e-34 149.4 233 39.9
CBR_g50658 Chara braunii HOM05M002286 ORTHO05M002664 2.3e-33 146.4 209 40.2
MBI13_g15008_MAGBIO Magnolia biondii HOM05M002286 ORTHO05M002664 6.6e-33 144.8 188 44.7
PH02Gene10055 Phyllostachys edulis HOM05M002286 ORTHO05M002664 3.3e-32 142.5 183 43.7
Dexi7A01G0008780 Digitaria exilis HOM05M002286 ORTHO05M002664 7.3e-32 141.4 240 36.2
Dexi1A01G0018130 Digitaria exilis HOM05M002286 ORTHO05M002664 2.1e-31 139.8 149 53.0
evm.TU.AsparagusV1_03.94.V1.1 Asparagus officinalis HOM05M002286 ORTHO05M002664 2.8e-31 139.4 192 41.1
CDE09G0029 Ceratophyllum demersum HOM05M002286 ORTHO05M002664 1.4e-30 137.1 255 35.3
Misin08G176600 Miscanthus sinensis HOM05M002286 ORTHO05M002664 1.8e-30 136.7 177 46.3
Sspon.05G0025410-2C Saccharum spontaneum HOM05M002286 ORTHO05M002664 3.1e-30 136.0 180 41.7
CALSI_Maker00036140 Calamus simplicifolius HOM05M002286 ORTHO05M002664 8.9e-30 134.4 135 52.6
Misin07G377400 Miscanthus sinensis HOM05M002286 ORTHO05M002664 1.2e-29 134.0 177 45.8
Dexi1B01G0017050 Digitaria exilis HOM05M002286 ORTHO05M002664 1.5e-29 133.7 154 51.3
Pp3c18_15811 Physcomitrium patens HOM05M002286 ORTHO05M002664 2.0e-29 133.3 153 47.1
Zjn_sc00017.1.g02430.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M002286 ORTHO05M002664 2.0e-29 133.3 214 41.1
SEGI_24013 Sequoiadendron giganteum HOM05M002286 ORTHO05M002664 4.1e-27 125.6 212 39.2
TRITD6Av1G119050 Triticum turgidum HOM05M002286 ORTHO05M002664 2.5e-24 116.3 218 35.8
Aco002872 Ananas comosus HOM05M002286 ORTHO05M002664 3.3e-24 115.9 192 39.1
GWHGAORA059553 Cenchrus purpureus HOM05M002286 ORTHO05M002664 7.3e-24 114.8 158 44.3
Sspon.05G0025410-1B Saccharum spontaneum HOM05M002286 ORTHO05M002664 4.7e-23 112.1 180 36.7
Cre06.g307600 Chlamydomonas reinhardtii HOM05M002286 ORTHO05M002664 7.6e-21 104.8 180 32.2
MBI18_g31321_MAGBIO Magnolia biondii HOM05M002286 ORTHO05M002664 4.9e-20 102.1 102 52.0
SEGI_41198 Sequoiadendron giganteum HOM05M002286 ORTHO05M002664 1.3e-17 94.0 78 61.5
HPP92_003164 Vanilla planifolia HOM05M002286 ORTHO05M002664 5.1e-17 92.0 132 38.6
CALSI_Maker00024383 Calamus simplicifolius HOM05M002286 ORTHO05M002664 6.6e-17 91.7 87 52.9
CALSI_Maker00024081 Calamus simplicifolius HOM05M000073 ORTHO05M000072 5.6e-16 88.6 89 50.6
TRIDC2AG047400 Triticum dicoccoides HOM05M002286 ORTHO05M002664 5.6e-16 88.6 105 47.6
CALSI_Maker00047422 Calamus simplicifolius HOM05M002286 ORTHO05M002664 9.6e-16 87.8 84 52.4
CALSI_Maker00040533 Calamus simplicifolius HOM05M002286 ORTHO05M002664 6.2e-15 85.1 111 43.2
CALSI_Maker00012656 Calamus simplicifolius HOM05M002286 ORTHO05M002664 1.8e-14 83.6 233 34.3
CALSI_Maker00031055 Calamus simplicifolius HOM05M002286 ORTHO05M002664 9.0e-14 81.3 76 55.3
Glyma.03G042200 Glycine max HOM05M002286 ORTHO05M002664 6.4e-12 75.1 66 56.1
HPP92_003163 Vanilla planifolia HOM05M002286 ORTHO05M265163 8.4e-12 74.7 156 30.8
Glyma.07G161400 Glycine max HOM05M002286 ORTHO05M002664 2.4e-11 73.2 68 55.9
Glyma.03G042100 Glycine max HOM05M002286 ORTHO05M002664 7.1e-11 71.6 66 53.0
TRITD6Bv1G118500 Triticum turgidum HOM05M002286 ORTHO05M002664 2.3e-09 66.6 92 37.0
GWHGAORA061897 Cenchrus purpureus HOM05M002286 ORTHO05M002664 6.6e-09 65.1 126 34.1
CALSI_Maker00012103 Calamus simplicifolius HOM05M002286 ORTHO05M004627 1.9e-08 63.5 82 42.7
Solyc12g077660.3 Solanum lycopersicum HOM05M002286 ORTHO05M002664 1.9e-08 63.5 56 62.5
CALSI_Maker00041834 Calamus simplicifolius HOM05M002286 ORTHO05M082200 5.6e-08 62.0 82 41.5
CBR_g44442 Chara braunii HOM05M001532 ORTHO05M001865 8.1e-07 58.2 142 28.9
CBR_g44437 Chara braunii HOM05M001532 ORTHO05M001865 1.1e-06 57.8 143 28.7
Glyma.09G064400 Glycine max HOM05M001532 ORTHO05M001865 1.4e-06 57.4 165 26.7
Glyma.15G170700 Glycine max HOM05M001532 ORTHO05M001865 1.4e-06 57.4 164 26.2
Dexi3B01G0018190 Digitaria exilis HOM05M001532 ORTHO05M001865 3.1e-06 56.2 219 23.7
SEGI_33843 Sequoiadendron giganteum HOM05M001532 ORTHO05M001865 6.9e-06 55.1 228 24.6
CBR_g32016 Chara braunii HOM05M001532 ORTHO05M001865 9.0e-06 54.7 165 24.8
Pp3c3_5880 Physcomitrium patens HOM05M001532 ORTHO05M001865 9.0e-06 54.7 164 25.6
SEGI_05220 Sequoiadendron giganteum HOM05M001532 ORTHO05M001865 9.0e-06 54.7 227 24.7


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