Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g086880.3 Solanum lycopersicum HOM05M001115 ORTHO05M005596 4.3e-74 280.4 135 100.0
Solyc03g013615.1 Solanum lycopersicum HOM05M001115 ORTHO05M005596 1.8e-27 125.6 70 80.0
Ot_Un136_gn40116 Oropetium thomaeum HOM05M001115 ORTHO05M005596 8.1e-25 116.7 95 56.8
Ot_Un168_gn40559 Oropetium thomaeum HOM05M001115 ORTHO05M005596 8.1e-25 116.7 95 56.8
Ot_Un3_gn40885 Oropetium thomaeum HOM05M001115 ORTHO05M005596 8.1e-25 116.7 95 56.8
Ot_Un9_gn41194 Oropetium thomaeum HOM05M001115 ORTHO05M005596 8.1e-25 116.7 95 56.8
TRIDC3AG060930 Triticum dicoccoides HOM05M001115 ORTHO05M005596 1.1e-24 116.3 105 51.4
TraesCS3A03G0999900 Triticum aestivum HOM05M001115 ORTHO05M005596 2.4e-24 115.2 105 50.5
TRITD3Av1G245780 Triticum turgidum HOM05M001115 ORTHO05M005596 2.4e-24 115.2 105 50.5
TraesCS2D03G0545000 Triticum aestivum HOM05M001115 ORTHO05M005596 2.0e-23 112.1 105 51.4
TraesCSU03G0369400 Triticum aestivum HOM05M001115 ORTHO05M005596 2.0e-23 112.1 105 51.4
Zm00007a00019265 Zea mays B104 HOM05M001115 ORTHO05M005596 2.0e-23 112.1 72 68.1
GWHGASIY019913 Secale cereale HOM05M001115 ORTHO05M005596 2.6e-23 111.7 95 54.7
TRITD3Bv1G004220 Triticum turgidum HOM05M001115 ORTHO05M005596 7.6e-23 110.2 105 50.5
TRIDC5BG041730 Triticum dicoccoides HOM05M001115 ORTHO05M005596 1.0e-22 109.8 105 51.4
TRITD5Bv1G143250 Triticum turgidum HOM05M001115 ORTHO05M005596 1.0e-22 109.8 105 51.4
TraesCS1B03G1091200 Triticum aestivum HOM05M001115 ORTHO05M005596 3.8e-22 107.8 105 50.5
TRITD1Bv1G206410 Triticum turgidum HOM05M001115 ORTHO05M005596 4.9e-22 107.5 105 51.4
Solyc11g021220.2 Solanum lycopersicum HOM05M001115 ORTHO05M005596 6.5e-22 107.1 72 70.8
AET4Gv20392300 Aegilops tauschii HOM05M001115 ORTHO05M005596 5.5e-21 104.0 105 49.5
TraesCS4D03G0386200 Triticum aestivum HOM05M001115 ORTHO05M005596 5.5e-21 104.0 105 49.5
TraesCS4A03G0316400 Triticum aestivum HOM05M001115 ORTHO05M005596 2.1e-20 102.1 105 47.6
TRIDC4AG020380 Triticum dicoccoides HOM05M001115 ORTHO05M005596 2.1e-20 102.1 105 47.6
TRITD4Av1G078280 Triticum turgidum HOM05M001115 ORTHO05M005596 2.1e-20 102.1 105 47.6
GWHGASIY032784 Secale cereale HOM05M001115 ORTHO05M005596 2.3e-19 98.6 68 61.8
ATCG01090 Arabidopsis thaliana HOM05M001115 ORTHO05M005596 1.9e-18 95.5 70 62.9
TRIDC1BG024380 Triticum dicoccoides HOM05M001115 ORTHO05M005596 5.7e-18 94.0 61 65.6
TraesCS3B03G0454600 Triticum aestivum HOM05M001115 ORTHO05M005596 7.4e-18 93.6 105 43.8
MBI10_g47589_MAGBIO Magnolia biondii HOM05M001115 ORTHO05M007197 9.6e-18 93.2 70 61.4
MBI10_g47594_MAGBIO Magnolia biondii HOM05M001115 ORTHO05M007197 9.6e-18 93.2 70 61.4
V3.Lp_chr7_0.1G1214 Lolium perenne HOM05M001115 ORTHO05M005596 3.7e-17 91.3 105 42.9
V3.Lp_chr7_0.1G1242 Lolium perenne HOM05M001115 ORTHO05M005596 3.7e-17 91.3 105 42.9
V3.Lp_scaffold_4559G12 Lolium perenne HOM05M001115 ORTHO05M005596 3.7e-17 91.3 105 42.9
V3.Lp_scaffold_4807G8 Lolium perenne HOM05M001115 ORTHO05M005596 3.7e-17 91.3 105 42.9
V3.Lp_scaffold_5331G6 Lolium perenne HOM05M001115 ORTHO05M005596 3.7e-17 91.3 105 42.9
V3.Lp_scaffold_891G12 Lolium perenne HOM05M001115 ORTHO05M005596 3.7e-17 91.3 105 42.9
Asa0G01758 Allium sativum HOM05M001115 ORTHO05M005596 1.1e-16 89.7 70 57.1
Horvu_MOREX_5H01G373900 Hordeum vulgare HOM05M001115 ORTHO05M005596 1.1e-16 89.7 105 42.9
Seita.8G059100 Setaria italica HOM05M001115 ORTHO05M005596 1.8e-16 89.0 106 44.3
OsKitaake12g099600 Oryza sativa Kitaake HOM05M001115 ORTHO05M005596 4.1e-16 87.8 106 44.3
TRITD1Bv1G042890 Triticum turgidum HOM05M001115 ORTHO05M005596 5.3e-16 87.4 122 40.2
Horvu_MOREX_3H01G394300 Hordeum vulgare HOM05M001115 ORTHO05M005596 6.9e-16 87.0 105 41.9
GWHGASIY019874 Secale cereale HOM05M001115 ORTHO05M005596 6.9e-16 87.0 105 41.9
TRIDC3AG071550 Triticum dicoccoides HOM05M001115 ORTHO05M005596 9.0e-16 86.7 103 42.7
TRIDC7AG039730 Triticum dicoccoides HOM05M001115 ORTHO05M005596 1.2e-15 86.3 59 61.0
Aco024830 Ananas comosus HOM05M001115 ORTHO05M005454 1.5e-15 85.9 105 41.9
Bradi1g05764 Brachypodium distachyon HOM05M001115 ORTHO05M005596 1.5e-15 85.9 105 41.9
GWHGAORA003696 Cenchrus purpureus HOM05M001115 ORTHO05M005596 2.0e-15 85.5 106 43.4
OsKitaake01g066196 Oryza sativa Kitaake HOM05M001115 ORTHO05M005596 2.0e-15 85.5 106 43.4
OsKitaake02g154500 Oryza sativa Kitaake HOM05M001115 ORTHO05M005596 2.0e-15 85.5 106 43.4
OsKitaake10g165810 Oryza sativa Kitaake HOM05M001115 ORTHO05M005596 2.0e-15 85.5 106 43.4
OsKitaake10g165828 Oryza sativa Kitaake HOM05M001115 ORTHO05M005596 2.0e-15 85.5 106 43.4
Pahal.3G033600 Panicum hallii HOM05M001115 ORTHO05M005596 2.0e-15 85.5 106 43.4
Zm00007a00017135 Zea mays B104 HOM05M001115 ORTHO05M005596 2.0e-15 85.5 106 43.4
Zm00007a00022331 Zea mays B104 HOM05M001115 ORTHO05M007197 2.0e-15 85.5 106 43.4
Pahal.5G371700 Panicum hallii HOM05M001115 ORTHO05M005596 4.5e-15 84.3 66 56.1
Pahal.J030500 Panicum hallii HOM05M001115 ORTHO05M005596 4.5e-15 84.3 66 56.1
TRITD3Bv1G075930 Triticum turgidum HOM05M001115 ORTHO05M005596 4.5e-15 84.3 105 41.0
Aco031707 Ananas comosus HOM05M001115 ORTHO05M005596 2.2e-14 82.0 96 43.8
Bradi1g46652 Brachypodium distachyon HOM05M001115 ORTHO05M005596 5.0e-14 80.9 67 61.2
GWHGASIY039892 Secale cereale HOM05M001115 ORTHO05M005596 6.5e-14 80.5 105 41.0
TRIDC7BG017870 Triticum dicoccoides HOM05M001115 ORTHO05M005596 6.5e-14 80.5 105 40.0
Zm00007a00002175 Zea mays B104 HOM05M001115 ORTHO05M005596 8.4e-14 80.1 70 51.4
Aco020235 Ananas comosus HOM05M001115 ORTHO05M005596 2.7e-12 75.1 52 67.3
Aco030030 Ananas comosus HOM05M001115 ORTHO05M005596 2.7e-12 75.1 52 67.3
OsR498G1018398800.01 Oryza sativa ssp. indica HOM05M001115 ORTHO05M005596 3.5e-12 74.7 44 75.0
GWHGAORA010086 Cenchrus purpureus HOM05M001115 ORTHO05M005596 1.0e-11 73.2 74 48.6
TRIDC4AG060040 Triticum dicoccoides HOM05M001115 ORTHO05M005596 2.5e-10 68.6 77 42.9
Mapoly0048s0041 Marchantia polymorpha HOM05M001115 ORTHO05M005596 2.8e-09 65.1 70 45.7
SMO086G0041 Selaginella moellendorffii HOM05M001115 ORTHO05M005596 2.8e-09 65.1 106 38.7
EJB05_36092 Eragrostis curvula HOM05M001115 ORTHO05M005596 9.0e-08 60.1 51 51.0
Zm00007a00001158 Zea mays B104 HOM05M001115 ORTHO05M005454 9.0e-08 60.1 51 51.0
Aco030998 Ananas comosus HOM05M001115 ORTHO05M005454 7.7e-07 57.0 68 39.7
TraesCS5B03G0650500 Triticum aestivum HOM05M001115 ORTHO05M005596 1.3e-06 56.2 105 33.3
Seita.J016500 Setaria italica HOM05M001115 ORTHO05M005596 1.7e-06 55.8 106 33.0


User provided reference genes

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