Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g068400.3 Solanum lycopersicum HOM05M003743 ORTHO05M004537 1.9e-54 214.9 114 100.0
AT2G30410 Arabidopsis thaliana HOM05M003743 ORTHO05M004537 1.9e-43 178.3 114 78.9
Glyma.12G219600 Glycine max HOM05M003743 ORTHO05M004537 1.9e-43 178.3 110 82.7
DDU643G0107 Dioscorea dumetorum HOM05M003743 ORTHO05M004537 8.1e-42 172.9 112 81.2
Glyma.13G281700 Glycine max HOM05M003743 ORTHO05M004537 1.1e-41 172.6 112 79.5
CALSI_Maker00020588 Calamus simplicifolius HOM05M003743 ORTHO05M004537 5.2e-41 170.2 112 81.2
MBI04_g38566_MAGBIO Magnolia biondii HOM05M003743 ORTHO05M004537 8.9e-41 169.5 112 79.5
Spipo11G0015000 Spirodela polyrhiza HOM05M003743 ORTHO05M004537 2.0e-40 168.3 114 76.3
p5.00_sc00297_p0007 Elaeis guineensis HOM05M003743 ORTHO05M004537 3.4e-40 167.5 112 79.5
CALSI_Maker00023935 Calamus simplicifolius HOM05M003743 ORTHO05M004537 1.3e-39 165.6 113 80.5
Potri.013G071100 Populus trichocarpa HOM05M003743 ORTHO05M004537 6.4e-39 163.3 113 71.7
Ma01_g13380 Musa acuminata HOM05M003743 ORTHO05M004537 1.4e-38 162.2 114 75.4
MBI14_g39049_MAGBIO Magnolia biondii HOM05M003743 ORTHO05M004537 4.2e-38 160.6 112 75.9
Aco010170 Ananas comosus HOM05M003743 ORTHO05M004537 1.2e-37 159.1 112 76.8
ATR0594G180 Amborella trichopoda HOM05M003743 ORTHO05M004537 4.6e-37 157.1 114 71.9
evm.TU.AsparagusV1_04.3143.V1.1 Asparagus officinalis HOM05M003743 ORTHO05M004537 6.0e-37 156.8 112 73.2
Zosma05g00440 Zostera marina HOM05M003743 ORTHO05M004537 7.8e-37 156.4 112 74.1
CDE02G3136 Ceratophyllum demersum HOM05M003743 ORTHO05M004537 1.0e-36 156.0 114 72.8
OB02G43950 Oryza brachyantha HOM05M003743 ORTHO05M004537 1.0e-36 156.0 112 75.9
GWHGAZTO021428 Oryza alta HOM05M003743 ORTHO05M004537 1.7e-36 155.2 112 75.9
PH02Gene10962 Phyllostachys edulis HOM05M003743 ORTHO05M004537 1.7e-36 155.2 112 75.0
HPP92_003331 Vanilla planifolia HOM05M003743 ORTHO05M004537 1.7e-36 155.2 112 72.3
GWHGAORA011259 Cenchrus purpureus HOM05M003743 ORTHO05M004537 3.0e-36 154.5 112 75.0
Dexi1B01G0030340 Digitaria exilis HOM05M003743 ORTHO05M004537 3.9e-36 154.1 112 75.0
Sspon.04G0000810-1A Saccharum spontaneum HOM05M003743 ORTHO05M004537 8.7e-36 152.9 103 80.6
TRIDC5AG004360 Triticum dicoccoides HOM05M003743 ORTHO05M004537 4.3e-35 150.6 103 79.6
Dexi1A01G0031380 Digitaria exilis HOM05M003743 ORTHO05M004537 7.3e-35 149.8 112 74.1
GWHGAORA010595 Cenchrus purpureus HOM05M003743 ORTHO05M004537 2.1e-34 148.3 112 74.1
GWHGAORA061273 Cenchrus purpureus HOM05M003743 ORTHO05M004537 2.1e-34 148.3 112 73.2
SEGI_02498 Sequoiadendron giganteum HOM05M003743 ORTHO05M004537 3.6e-34 147.5 111 71.2
SEGI_10368 Sequoiadendron giganteum HOM05M003743 ORTHO05M004537 2.4e-33 144.8 111 70.3
Seita.1G365100 Setaria italica HOM05M003743 ORTHO05M004537 2.0e-32 141.7 90 82.2
Os02g0816500 Oryza sativa ssp. japonica HOM05M003743 ORTHO05M004537 2.6e-32 141.4 84 88.1
Asa1G00730 Allium sativum HOM05M003743 ORTHO05M004537 5.8e-32 140.2 111 69.4
Sevir.8G031400 Setaria viridis HOM05M003743 ORTHO05M004537 7.6e-32 139.8 112 70.5
evm.TU.AsparagusV1_10.852.V1.1 Asparagus officinalis HOM05M003743 ORTHO05M004537 1.3e-31 139.0 77 92.2
GWHGAORA025749 Cenchrus purpureus HOM05M003743 ORTHO05M004537 4.9e-31 137.1 79 89.9
GWHGAORA025793 Cenchrus purpureus HOM05M003743 ORTHO05M004537 4.9e-31 137.1 79 89.9
GWHGAORA042910 Cenchrus purpureus HOM05M003743 ORTHO05M004537 4.9e-31 137.1 79 89.9
Misin07G541200 Miscanthus sinensis HOM05M003743 ORTHO05M004537 4.9e-31 137.1 79 89.9
GWHGAZTO073043 Oryza alta HOM05M003743 ORTHO05M004537 4.9e-31 137.1 79 89.9
OsKitaake02g383100 Oryza sativa Kitaake HOM05M003743 ORTHO05M004537 4.9e-31 137.1 79 89.9
OsR498G0205006500.01 Oryza sativa ssp. indica HOM05M003743 ORTHO05M004537 4.9e-31 137.1 79 89.9
Pahal.1G446800 Panicum hallii HOM05M003743 ORTHO05M004537 4.9e-31 137.1 79 89.9
Sspon.04G0030730-1C Saccharum spontaneum HOM05M003743 ORTHO05M004537 4.9e-31 137.1 79 89.9
Sspon.04G0030730-1P Saccharum spontaneum HOM05M003743 ORTHO05M004537 4.9e-31 137.1 79 89.9
Sspon.04G0030730-2D Saccharum spontaneum HOM05M003743 ORTHO05M004537 4.9e-31 137.1 79 89.9
V3.Lp_chr3_0G17298 Lolium perenne HOM05M003743 ORTHO05M004537 6.4e-31 136.7 77 92.2
Sobic.004G344500 Sorghum bicolor HOM05M003743 ORTHO05M004537 1.1e-30 136.0 79 88.6
AET5Gv20099000 Aegilops tauschii HOM05M003743 ORTHO05M004537 1.4e-30 135.6 77 90.9
Bradi2g49650 Brachypodium distachyon HOM05M003743 ORTHO05M004537 1.4e-30 135.6 77 90.9
EJB05_19215 Eragrostis curvula HOM05M003743 ORTHO05M004537 1.4e-30 135.6 77 90.9
Ot_Chr2_g16213 Oropetium thomaeum HOM05M003743 ORTHO05M004537 1.4e-30 135.6 77 90.9
TraesCS5A03G0074100 Triticum aestivum HOM05M003743 ORTHO05M004537 1.4e-30 135.6 77 90.9
TraesCS5B03G0067800 Triticum aestivum HOM05M003743 ORTHO05M004537 1.4e-30 135.6 77 90.9
TraesCS5D03G0098500 Triticum aestivum HOM05M003743 ORTHO05M004537 1.4e-30 135.6 77 90.9
TRIDC5BG004530 Triticum dicoccoides HOM05M003743 ORTHO05M004537 1.4e-30 135.6 77 90.9
TRITD5Av1G013100 Triticum turgidum HOM05M003743 ORTHO05M004537 1.4e-30 135.6 77 90.9
TRITD5Bv1G010690 Triticum turgidum HOM05M003743 ORTHO05M004537 1.4e-30 135.6 77 90.9
Zm00001eb258870 Zea mays B73 HOM05M003743 ORTHO05M004537 1.4e-30 135.6 79 88.6
Zm00007a00029805 Zea mays B104 HOM05M003743 ORTHO05M004537 1.4e-30 135.6 79 88.6
Misin08G326800 Miscanthus sinensis HOM05M003743 ORTHO05M004537 3.2e-30 134.4 79 88.6
GWHGASIY024282 Secale cereale HOM05M003743 ORTHO05M004537 3.2e-30 134.4 77 89.6
Seita.9G575400 Setaria italica HOM05M003743 ORTHO05M004537 7.1e-30 133.3 79 87.3
Zjn_sc00066.1.g00910.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M003743 ORTHO05M004537 7.1e-30 133.3 77 88.3
Misin07G330300 Miscanthus sinensis HOM05M003743 ORTHO05M004537 9.3e-30 132.9 112 69.6
Sevir.1G371700 Setaria viridis HOM05M003743 ORTHO05M004537 9.3e-30 132.9 76 89.5
Horvu_MOREX_5H01G038400 Hordeum vulgare HOM05M003743 ORTHO05M004537 1.2e-29 132.5 77 89.6
Ot_Chr1_g04639 Oropetium thomaeum HOM05M003743 ORTHO05M004537 1.2e-29 132.5 76 88.2
PH02Gene15118 Phyllostachys edulis HOM05M003743 ORTHO05M004537 2.1e-29 131.7 112 66.1
Bradi3g55310 Brachypodium distachyon HOM05M003743 ORTHO05M004537 1.3e-26 122.5 79 79.7
GWHGASIY042266 Secale cereale HOM05M003743 ORTHO05M004537 6.2e-26 120.2 111 60.4
TraesCS6A03G0980200 Triticum aestivum HOM05M003743 ORTHO05M004537 4.5e-24 114.0 100 63.0
TRIDC6AG057670 Triticum dicoccoides HOM05M003743 ORTHO05M004537 4.5e-24 114.0 100 63.0
SMO140G0024 Selaginella moellendorffii HOM05M003743 ORTHO05M004537 7.6e-24 113.2 78 73.1
AET6Gv20948700 Aegilops tauschii HOM05M003743 ORTHO05M004537 3.8e-23 110.9 74 74.3
GWHGAORA011222 Cenchrus purpureus HOM05M003743 ORTHO05M004537 1.9e-22 108.6 112 58.0
Mapoly0038s0031 Marchantia polymorpha HOM05M003743 ORTHO05M004537 3.2e-22 107.8 106 54.7
GWHGASIY034053 Secale cereale HOM05M003743 ORTHO05M004537 3.2e-22 107.8 75 72.0
CBR_g52286 Chara braunii HOM05M003743 ORTHO05M004537 9.3e-22 106.3 104 57.7
GWHGAZTO070702 Oryza alta HOM05M003743 ORTHO05M004537 6.0e-21 103.6 69 75.4
AagrBONN_evm.TU.Sc2ySwM_368.563 Anthoceros agrestis HOM05M001029 ORTHO05M002808 4.3e-19 97.4 108 50.9
TRIDC6BG067330 Triticum dicoccoides HOM05M003743 ORTHO05M004537 4.3e-19 97.4 75 68.0
Pp3c8_15900 Physcomitrium patens HOM05M003743 ORTHO05M004537 5.6e-19 97.1 109 46.8
Pp3c5_8620 Physcomitrium patens HOM05M003743 ORTHO05M004537 1.3e-15 85.9 80 53.8
Pp3c15_6440 Physcomitrium patens HOM05M003743 ORTHO05M004537 6.5e-15 83.6 104 46.2
Cre16.g670800 Chlamydomonas reinhardtii HOM05M003743 ORTHO05M004537 1.9e-14 82.0 106 45.3
MBI18_g40062_MAGBIO Magnolia biondii HOM05M003743 ORTHO05M004537 2.5e-14 81.6 45 91.1
CALSI_Maker00021436 Calamus simplicifolius HOM05M003743 ORTHO05M004537 1.2e-13 79.3 56 76.8
CALSI_Maker00036742 Calamus simplicifolius HOM05M003743 ORTHO05M004537 1.2e-13 79.3 56 76.8
CALSI_Maker00042428 Calamus simplicifolius HOM05M003743 ORTHO05M004537 1.2e-13 79.3 56 76.8
PH02Gene05888 Phyllostachys edulis HOM05M003743 ORTHO05M004537 1.2e-13 79.3 87 51.7
CALSI_Maker00019871 Calamus simplicifolius HOM05M003743 ORTHO05M004537 6.0e-13 77.0 51 80.4
CALSI_Maker00002156 Calamus simplicifolius HOM05M003743 ORTHO05M004537 1.3e-12 75.9 50 84.0
CALSI_Maker00003709 Calamus simplicifolius HOM05M003743 ORTHO05M004537 1.3e-12 75.9 50 84.0
CALSI_Maker00002154 Calamus simplicifolius HOM05M003743 ORTHO05M004537 2.3e-12 75.1 51 80.4
MCO15G208 Micromonas commoda HOM05M003743 ORTHO05M004537 2.3e-12 75.1 106 43.4
PRCOL_00002235 Prasinoderma coloniale HOM05M003743 ORTHO05M004537 1.9e-11 72.0 95 42.1
GWHGAORA002418 Cenchrus purpureus HOM05M003743 ORTHO05M004537 4.1e-09 64.3 62 58.1
Pp3c12_22810 Physcomitrium patens HOM05M003743 ORTHO05M004537 1.2e-08 62.8 59 49.2


User provided reference genes

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