Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g065810.2 Solanum lycopersicum HOM05M001788 ORTHO05M000884 1.1e-71 272.3 129 100.0
Solyc00g500185.1 Solanum lycopersicum HOM05M001788 ORTHO05M000884 3.0e-61 237.7 128 87.5
DDU608G0021 Dioscorea dumetorum HOM05M001788 ORTHO05M000884 2.7e-49 198.0 111 88.3
DDU760G0006 Dioscorea dumetorum HOM05M001788 ORTHO05M000884 2.7e-49 198.0 111 88.3
Zm00007a00045813 Zea mays B104 HOM05M001788 ORTHO05M000884 1.3e-48 195.7 112 86.6
Aco028295 Ananas comosus HOM05M001788 ORTHO05M000884 4.2e-47 190.7 106 87.7
Ot_Un165_gn40452 Oropetium thomaeum HOM05M001788 ORTHO05M000884 9.4e-47 189.5 107 87.9
Aco020215 Ananas comosus HOM05M003092 ORTHO05M003594 4.0e-45 184.1 102 87.3
Zm00007a00014862 Zea mays B104 HOM05M001788 ORTHO05M000884 6.8e-45 183.3 104 86.5
Aco020766 Ananas comosus HOM05M001788 ORTHO05M000884 5.7e-44 180.3 109 83.5
Zosma360g00100 Zostera marina HOM05M001788 ORTHO05M000884 8.3e-43 176.4 129 73.6
Zosma52g00110 Zostera marina HOM05M001788 ORTHO05M000884 8.3e-43 176.4 129 73.6
Zosma838g00080 Zostera marina HOM05M001788 ORTHO05M000884 8.3e-43 176.4 129 73.6
Horvu_MOREX_Un01G025700 Hordeum vulgare HOM05M001788 ORTHO05M000884 3.1e-42 174.5 99 87.9
Asa4G05289 Allium sativum HOM05M001788 ORTHO05M000884 4.1e-42 174.1 97 88.7
Glyma.15G188000 Glycine max HOM05M001788 ORTHO05M000884 1.6e-41 172.2 97 87.6
Asa1G04886 Allium sativum HOM05M001788 ORTHO05M000884 3.5e-41 171.0 95 87.4
AET4Gv20764300 Aegilops tauschii HOM05M001788 ORTHO05M000884 7.7e-41 169.9 97 87.6
Sevir.1G145572 Setaria viridis HOM05M001788 ORTHO05M000884 7.7e-41 169.9 97 87.6
Glyma.15G187666 Glycine max HOM05M001788 ORTHO05M000884 1.3e-40 169.1 97 86.6
mito9_g00030 Musa acuminata HOM05M001788 ORTHO05M000884 1.3e-40 169.1 95 87.4
Asa1G00120 Allium sativum HOM05M001788 ORTHO05M000884 2.3e-40 168.3 97 85.6
Asa0G02545 Allium sativum HOM05M001788 ORTHO05M000884 7.3e-39 163.3 93 82.8
Asa5G03565 Allium sativum HOM05M001788 ORTHO05M000884 1.6e-38 162.2 97 81.4
Asa4G06100 Allium sativum HOM05M001788 ORTHO05M000884 2.3e-37 158.3 91 84.6
AET0Gv20108600 Aegilops tauschii HOM05M001788 ORTHO05M000884 6.8e-37 156.8 88 87.5
AET3Gv20875800 Aegilops tauschii HOM05M001788 ORTHO05M000884 6.8e-37 156.8 88 87.5
AET4Gv20764000 Aegilops tauschii HOM05M001788 ORTHO05M000884 6.8e-37 156.8 88 87.5
AET7Gv20710100 Aegilops tauschii HOM05M001788 ORTHO05M000884 6.8e-37 156.8 88 87.5
AET7Gv20763000 Aegilops tauschii HOM05M001788 ORTHO05M000884 6.8e-37 156.8 88 87.5
TRIDC3BG001750 Triticum dicoccoides HOM05M001788 ORTHO05M000884 6.8e-37 156.8 88 87.5
TRIDC5AG060110 Triticum dicoccoides HOM05M001788 ORTHO05M000884 6.8e-37 156.8 88 87.5
TRIDC6BG049910 Triticum dicoccoides HOM05M001788 ORTHO05M000884 6.8e-37 156.8 88 87.5
TRIDC7AG059800 Triticum dicoccoides HOM05M001788 ORTHO05M000884 6.8e-37 156.8 88 87.5
TRIDC1BG023410 Triticum dicoccoides HOM05M001788 ORTHO05M000884 8.9e-37 156.4 88 86.4
TRIDC4AG010630 Triticum dicoccoides HOM05M001788 ORTHO05M000884 8.9e-37 156.4 87 87.4
AET0Gv20091100 Aegilops tauschii HOM05M001788 ORTHO05M000884 1.2e-36 156.0 94 84.0
AET0Gv20094000 Aegilops tauschii HOM05M001788 ORTHO05M000884 1.2e-36 156.0 94 84.0
AET0Gv20094700 Aegilops tauschii HOM05M001788 ORTHO05M000884 1.2e-36 156.0 94 84.0
AET0Gv20099900 Aegilops tauschii HOM05M001788 ORTHO05M000884 1.2e-36 156.0 94 84.0
AET0Gv20111100 Aegilops tauschii HOM05M001788 ORTHO05M000884 1.2e-36 156.0 94 84.0
AET3Gv20245300 Aegilops tauschii HOM05M001788 ORTHO05M000884 1.2e-36 156.0 94 84.0
AET4Gv20293900 Aegilops tauschii HOM05M001788 ORTHO05M000884 1.2e-36 156.0 94 84.0
AET6Gv20951600 Aegilops tauschii HOM05M001788 ORTHO05M000884 1.2e-36 156.0 94 84.0
TRITD4Av1G032650 Triticum turgidum HOM05M001788 ORTHO05M000884 1.2e-36 156.0 94 83.0
ATMG00510 Arabidopsis thaliana HOM05M001788 ORTHO05M000884 2.6e-36 154.8 116 70.7
TRIDC3BG005800 Triticum dicoccoides HOM05M001788 ORTHO05M000884 4.4e-36 154.1 88 85.2
TRIDC2BG031470 Triticum dicoccoides HOM05M001788 ORTHO05M000884 7.5e-36 153.3 88 86.4
SEGI_08012 Sequoiadendron giganteum HOM05M001788 ORTHO05M000884 1.7e-35 152.1 116 69.8
AET6Gv20384100 Aegilops tauschii HOM05M001788 ORTHO05M000884 3.7e-35 151.0 86 86.0
Asa0G00662 Allium sativum HOM05M001788 ORTHO05M000884 3.7e-35 151.0 86 84.9
TraesCS6D03G0312000 Triticum aestivum HOM05M001788 ORTHO05M000884 3.7e-35 151.0 86 86.0
TRIDC6BG057320 Triticum dicoccoides HOM05M001788 ORTHO05M000884 6.4e-35 150.2 100 77.0
SEGI_01046 Sequoiadendron giganteum HOM05M001788 ORTHO05M000884 1.6e-33 145.6 112 68.8
SEGI_25166 Sequoiadendron giganteum HOM05M001788 ORTHO05M000884 1.6e-33 145.6 112 68.8
SMO053G0001 Selaginella moellendorffii HOM05M001788 ORTHO05M000884 1.0e-32 142.9 91 76.9
Asa0G04249 Allium sativum HOM05M001788 ORTHO05M000884 2.3e-32 141.7 82 82.9
AagrBONN_evm.TU.Sc2ySwM_117.4105 Anthoceros agrestis HOM05M001788 ORTHO05M000884 3.3e-31 137.9 85 78.8
Mapoly0011s0058 Marchantia polymorpha HOM05M001788 ORTHO05M000884 4.3e-31 137.5 85 76.5
Seita.1G140200 Setaria italica HOM05M001788 ORTHO05M000884 1.8e-29 132.1 72 90.3
Seita.J010100 Setaria italica HOM05M001788 ORTHO05M000884 1.8e-29 132.1 72 90.3
Solyc12g036590.1 Solanum lycopersicum HOM05M001788 ORTHO05M000884 2.2e-27 125.2 74 82.4
Misin01G271900 Miscanthus sinensis HOM05M001788 ORTHO05M000884 3.2e-26 121.3 71 84.5
Misin08G127700 Miscanthus sinensis HOM05M001788 ORTHO05M000884 9.2e-26 119.8 97 69.1
PRCOL_00000735 Prasinoderma coloniale HOM05M001788 ORTHO05M000884 3.5e-25 117.9 85 69.4
Cre09.g405850 Chlamydomonas reinhardtii HOM05M001788 ORTHO05M000884 1.1e-23 112.8 85 64.7
Asa6G03214 Allium sativum HOM05M001788 ORTHO05M000884 9.5e-23 109.8 79 68.4
Asa0G02432 Allium sativum HOM05M001788 ORTHO05M000884 6.2e-22 107.1 92 60.9
TRIDC4BG024120 Triticum dicoccoides HOM05M001788 ORTHO05M000884 9.8e-20 99.8 56 83.9
Solyc09g031577.1 Solanum lycopersicum HOM05M001788 ORTHO05M000884 1.3e-19 99.4 103 51.5
TRIDC4BG041870 Triticum dicoccoides HOM05M001788 ORTHO05M000884 1.4e-13 79.3 44 88.6
DDU759G0003 Dioscorea dumetorum HOM05M001788 ORTHO05M000884 2.3e-13 78.6 41 92.7
Mapoly0048s0043 Marchantia polymorpha HOM05M001368 ORTHO05M000884 4.9e-11 70.9 76 47.4
Aco024829 Ananas comosus HOM05M001368 ORTHO05M000884 4.1e-10 67.8 76 44.7
ATCG01110 Arabidopsis thaliana HOM05M001368 ORTHO05M000884 4.1e-10 67.8 76 46.1
OsKitaake02g154800 Oryza sativa Kitaake HOM05M001368 ORTHO05M000884 7.1e-10 67.0 76 44.7
Solyc00g500087.1 Solanum lycopersicum HOM05M001368 ORTHO05M000884 7.1e-10 67.0 76 46.1
Solyc00g500124.1 Solanum lycopersicum HOM05M001368 ORTHO05M000884 7.1e-10 67.0 76 46.1
Solyc00g500192.1 Solanum lycopersicum HOM05M001368 ORTHO05M000884 7.1e-10 67.0 76 46.1
Solyc00g500280.1 Solanum lycopersicum HOM05M001368 ORTHO05M000884 7.1e-10 67.0 76 46.1
Asa0G03808 Allium sativum HOM05M001368 ORTHO05M000884 9.2e-10 66.6 76 44.7
Asa5G04353 Allium sativum HOM05M001368 ORTHO05M000884 9.2e-10 66.6 76 44.7
Asa6G04203 Allium sativum HOM05M001368 ORTHO05M000884 9.2e-10 66.6 76 44.7
Asa7G03180 Allium sativum HOM05M001368 ORTHO05M000884 9.2e-10 66.6 76 44.7
TraesCS1D03G0473000 Triticum aestivum HOM05M001368 ORTHO05M000884 9.2e-10 66.6 68 50.0
TraesCSU03G0416000 Triticum aestivum HOM05M001368 ORTHO05M000884 9.2e-10 66.6 76 44.7
GWHGAORA002271 Cenchrus purpureus HOM05M001368 ORTHO05M000884 1.6e-09 65.9 76 44.7
Zm00007a00001160 Zea mays B104 HOM05M001368 ORTHO05M000884 1.6e-09 65.9 68 48.5
Zm00007a00002177 Zea mays B104 HOM05M001368 ORTHO05M000884 1.6e-09 65.9 68 48.5
AET2Gv20473300 Aegilops tauschii HOM05M001368 ORTHO05M000884 2.1e-09 65.5 76 44.7
GWHGAORA002206 Cenchrus purpureus HOM05M001368 ORTHO05M000884 2.1e-09 65.5 76 44.7
DDU125G0051 Dioscorea dumetorum HOM05M001368 ORTHO05M000884 2.1e-09 65.5 76 43.4
DDU581G0019 Dioscorea dumetorum HOM05M001368 ORTHO05M000884 2.1e-09 65.5 76 43.4
DDU643G0035 Dioscorea dumetorum HOM05M001368 ORTHO05M000884 2.1e-09 65.5 76 43.4
V3.Lp_chr7_0.1G1210 Lolium perenne HOM05M001368 ORTHO05M000884 2.1e-09 65.5 76 44.7
OsKitaake01g066188 Oryza sativa Kitaake HOM05M001368 ORTHO05M000884 2.1e-09 65.5 76 44.7
OsKitaake10g165808 Oryza sativa Kitaake HOM05M001368 ORTHO05M000884 2.1e-09 65.5 76 44.7
OsR498G0022238000.01 Oryza sativa ssp. indica HOM05M001368 ORTHO05M000884 2.1e-09 65.5 76 44.7
Pahal.3G033400 Panicum hallii HOM05M001368 ORTHO05M000884 2.1e-09 65.5 76 44.7
GWHGASIY019876 Secale cereale HOM05M001368 ORTHO05M000884 2.1e-09 65.5 76 44.7
TraesCS7B03G0216100 Triticum aestivum HOM05M001368 ORTHO05M000884 2.1e-09 65.5 76 44.7
Zm00007a00017133 Zea mays B104 HOM05M001368 ORTHO05M000884 2.1e-09 65.5 76 44.7
Zm00007a00022328 Zea mays B104 HOM05M001368 ORTHO05M000884 2.1e-09 65.5 76 44.7
Zm00007a00029474 Zea mays B104 HOM05M001368 ORTHO05M000884 2.1e-09 65.5 76 44.7
Seita.J016300 Setaria italica HOM05M001368 ORTHO05M000884 3.5e-09 64.7 68 48.5
Bradi3g27267 Brachypodium distachyon HOM05M001368 ORTHO05M000884 4.6e-09 64.3 76 43.4
TRIDC7BG012010 Triticum dicoccoides HOM05M001368 ORTHO05M000884 6.0e-09 63.9 76 43.4
AET5Gv20749200 Aegilops tauschii HOM05M001368 ORTHO05M000884 7.8e-09 63.5 74 43.2
TraesCS5D03G0846500 Triticum aestivum HOM05M001368 ORTHO05M000884 7.8e-09 63.5 76 43.4
AET0Gv20052700 Aegilops tauschii HOM05M001368 ORTHO05M000884 1.0e-08 63.2 76 43.4
GWHGASIY019912 Secale cereale HOM05M001368 ORTHO05M000884 1.0e-08 63.2 76 43.4
TraesCS2D03G0545300 Triticum aestivum HOM05M001368 ORTHO05M000884 1.0e-08 63.2 76 43.4
SEGI_36880 Sequoiadendron giganteum HOM05M001368 ORTHO05M000884 3.0e-08 61.6 76 42.1
SEGI_41539 Sequoiadendron giganteum HOM05M001368 ORTHO05M000884 3.0e-08 61.6 76 42.1
TraesCS1B03G1091500 Triticum aestivum HOM05M001368 ORTHO05M000884 5.1e-08 60.8 76 42.1
Asa7G05756 Allium sativum HOM05M001368 ORTHO05M000884 1.9e-07 58.9 76 43.4
ATR0924G001 Amborella trichopoda HOM05M001368 ORTHO05M000884 3.3e-07 58.2 69 43.5
SMO086G0065 Selaginella moellendorffii HOM05M001368 ORTHO05M000884 2.8e-06 55.1 78 41.0
Solyc07g032420.3 Solanum lycopersicum HOM05M001368 ORTHO05M000884 8.1e-06 53.5 68 39.7


User provided reference genes

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