Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g020520.4 Solanum lycopersicum HOM05M006684 ORTHO05M008297 1.5e-253 878.2 432 100.0
Solyc01g049910.4 Solanum lycopersicum HOM05M006684 ORTHO05M008297 3.2e-208 727.6 391 92.8
Potri.003G157800 Populus trichocarpa HOM05M006684 ORTHO05M008297 1.2e-101 373.6 398 49.5
MBI10_g30431_MAGBIO Magnolia biondii HOM05M006684 ORTHO05M008297 5.0e-100 368.2 397 51.1
Glyma.16G096000 Glycine max HOM05M006684 ORTHO05M008297 9.1e-94 347.4 383 47.3
AT4G20310 Arabidopsis thaliana HOM05M006684 ORTHO05M008297 3.7e-87 325.5 380 46.6
p5.00_sc00018_p0106 Elaeis guineensis HOM05M006684 ORTHO05M008297 3.1e-86 322.4 394 44.9
evm.TU.AsparagusV1_05.2822.V1.1 Asparagus officinalis HOM05M006684 ORTHO05M008297 5.3e-86 321.6 388 44.3
Ma05_g09160 Musa acuminata HOM05M006684 ORTHO05M008297 5.0e-84 315.1 396 43.4
Ot_Chr3_g11754 Oropetium thomaeum HOM05M006684 ORTHO05M008297 4.8e-79 298.5 403 40.4
Asa3G01824 Allium sativum HOM05M006684 ORTHO05M008297 9.1e-78 294.3 372 42.2
Aco005498 Ananas comosus HOM05M006684 ORTHO05M008297 8.5e-76 287.7 400 40.5
Misin06G203800 Miscanthus sinensis HOM05M006684 ORTHO05M008297 3.2e-75 285.8 396 39.9
ATR0737G179 Amborella trichopoda HOM05M006684 ORTHO05M008297 7.2e-75 284.6 399 41.1
V3.Lp_chr3_0G14056 Lolium perenne HOM05M006684 ORTHO05M008297 3.6e-74 282.3 391 40.7
Seita.5G247800 Setaria italica HOM05M006684 ORTHO05M008297 6.1e-74 281.6 395 40.0
Sevir.5G255500 Setaria viridis HOM05M006684 ORTHO05M008297 6.1e-74 281.6 395 40.0
Sobic.003G241100 Sorghum bicolor HOM05M006684 ORTHO05M008297 8.0e-74 281.2 396 40.2
HPP92_009939 Vanilla planifolia HOM05M006684 ORTHO05M008297 1.4e-73 280.4 398 41.2
GWHGAORA032226 Cenchrus purpureus HOM05M006684 ORTHO05M008297 3.0e-73 279.3 394 39.6
GWHGAORA044146 Cenchrus purpureus HOM05M006684 ORTHO05M008297 4.0e-73 278.9 394 39.6
Zm00007a00035901 Zea mays B104 HOM05M006684 ORTHO05M008297 2.0e-72 276.6 395 38.7
GWHGAZTO056497 Oryza alta HOM05M006684 ORTHO05M008297 3.4e-72 275.8 404 40.3
TraesCS3B03G0690300 Triticum aestivum HOM05M006684 ORTHO05M008297 3.4e-72 275.8 401 39.7
TRITD3Bv1G137950 Triticum turgidum HOM05M006684 ORTHO05M008297 3.4e-72 275.8 401 39.7
SEGI_11534 Sequoiadendron giganteum HOM05M006684 ORTHO05M008297 4.4e-72 275.4 405 38.5
TraesCS3D03G0559600 Triticum aestivum HOM05M006684 ORTHO05M008297 1.7e-71 273.5 401 39.2
GWHGASIY015373 Secale cereale HOM05M006684 ORTHO05M008297 2.2e-71 273.1 401 38.9
GWHGASIY015376 Secale cereale HOM05M006684 ORTHO05M008297 2.8e-71 272.7 401 38.9
Spipo8G0046900 Spirodela polyrhiza HOM05M006684 ORTHO05M008297 2.8e-71 272.7 352 42.9
Bradi2g45400 Brachypodium distachyon HOM05M006684 ORTHO05M008297 1.8e-70 270.0 395 39.5
Horvu_MOREX_3H01G347100 Hordeum vulgare HOM05M006684 ORTHO05M008297 1.8e-70 270.0 402 39.3
Pahal.5G223400 Panicum hallii HOM05M006684 ORTHO05M008297 7.0e-70 268.1 394 39.1
Misin05G230800 Miscanthus sinensis HOM05M006684 ORTHO05M008297 9.1e-70 267.7 377 38.7
TRIDC3AG035420 Triticum dicoccoides HOM05M006684 ORTHO05M008297 2.0e-69 266.5 377 39.0
TraesCS3A03G0609500 Triticum aestivum HOM05M006684 ORTHO05M008297 4.5e-69 265.4 377 38.7
TRITD3Av1G157400 Triticum turgidum HOM05M006684 ORTHO05M008297 4.5e-69 265.4 377 38.7
OsR498G0101676600.01 Oryza sativa ssp. indica HOM05M006684 ORTHO05M008297 5.0e-68 261.9 404 39.1
OB01G34120 Oryza brachyantha HOM05M006684 ORTHO05M008297 1.9e-67 260.0 404 39.1
OsKitaake01g264800 Oryza sativa Kitaake HOM05M006684 ORTHO05M008297 9.5e-67 257.7 376 39.9
DDU613G0400 Dioscorea dumetorum HOM05M006684 ORTHO05M008297 1.2e-64 250.8 382 37.7
DDU879G0325 Dioscorea dumetorum HOM05M006684 ORTHO05M008297 1.5e-64 250.4 382 37.7
Sspon.03G0010060-1A Saccharum spontaneum HOM05M006684 ORTHO05M008297 4.7e-58 228.8 351 36.5
PH02Gene14526 Phyllostachys edulis HOM05M006684 ORTHO05M008297 4.4e-56 222.2 336 38.7
EJB05_17626 Eragrostis curvula HOM05M006684 ORTHO05M008297 1.9e-51 206.8 337 36.2
TRIDC3BG039770 Triticum dicoccoides HOM05M006684 ORTHO05M008297 3.4e-48 196.1 340 35.6
AET3Gv20579000 Aegilops tauschii HOM05M006684 ORTHO05M008297 4.4e-48 195.7 340 35.6
Os01g0654200 Oryza sativa ssp. japonica HOM05M006684 ORTHO05M008297 1.3e-47 194.1 353 35.1
Zosma01g14880 Zostera marina HOM05M006684 ORTHO05M008297 6.4e-47 191.8 341 36.7
GWHGAZTO004165 Oryza alta HOM05M006684 ORTHO05M008297 8.3e-47 191.4 343 35.0
AagrBONN_evm.TU.Sc2ySwM_368.2736 Anthoceros agrestis HOM05M006684 ORTHO05M008297 2.0e-40 170.2 388 32.2
Zm00001eb158090 Zea mays B73 HOM05M006684 ORTHO05M008297 5.4e-38 162.2 280 34.3
Potri.001G073200 Populus trichocarpa HOM05M006684 ORTHO05M008297 1.3e-31 141.0 227 37.4
SMO176G0004 Selaginella moellendorffii HOM05M006684 ORTHO05M008297 4.7e-26 122.5 376 27.9
evm.TU.AsparagusV1_Unassigned.674.V1.1 Asparagus officinalis HOM05M006684 ORTHO05M008297 3.8e-23 112.8 175 37.7
Sspon.03G0010060-2D Saccharum spontaneum HOM05M006684 ORTHO05M008297 1.9e-19 100.5 157 34.4
CALSI_Maker00000780 Calamus simplicifolius HOM05M006684 ORTHO05M008297 3.6e-18 96.3 83 57.8
Dexi5A01G0022040 Digitaria exilis HOM05M006684 ORTHO05M008297 3.6e-18 96.3 78 56.4
Dexi5B01G0022140 Digitaria exilis HOM05M006684 ORTHO05M008297 8.1e-18 95.1 78 55.1
HPP92_007230 Vanilla planifolia HOM05M006684 ORTHO05M008297 1.1e-17 94.7 190 37.4
CBR_g19989 Chara braunii HOM05M006684 ORTHO05M008297 1.4e-14 84.3 108 39.8
CBR_g19993 Chara braunii HOM05M006684 ORTHO05M008297 1.0e-12 78.2 102 38.2
GWHGAZTO004166 Oryza alta HOM05M006684 ORTHO05M008297 4.3e-11 72.8 51 66.7
AET0Gv20017300 Aegilops tauschii HOM05M006684 ORTHO05M008297 7.6e-08 62.0 63 50.8
HPP92_007178 Vanilla planifolia HOM05M006684 ORTHO05M008297 3.2e-06 56.6 97 37.1

Aegilops tauschii (2 genes)
Allium sativum (1 genes)
Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Anthoceros agrestis (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus purpureus (2 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (2 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (2 genes)
Dioscorea dumetorum (2 genes)
Elaeis guineensis (1 genes)
Eragrostis curvula (1 genes)
Glycine max (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Magnolia biondii (1 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (1 genes)
Oryza alta (3 genes)
Oryza brachyantha (1 genes)
Oryza sativa Kitaake (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Panicum hallii (1 genes)
Phyllostachys edulis (1 genes)
Physcomitrium patens (0 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (2 genes)
Secale cereale (2 genes)
Selaginella moellendorffii (1 genes)
Sequoiadendron giganteum (1 genes)
Setaria italica (1 genes)
Setaria viridis (1 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum dicoccoides (2 genes)
Triticum turgidum (2 genes)
Vanilla planifolia (3 genes)
Zea mays B73 (1 genes)
Zea mays B104 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (0 genes)

Program Settings