Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g020130.3 Solanum lycopersicum HOM05M002388 ORTHO05M004839 3.0e-111 404.4 208 100.0
Solyc11g011850.2 Solanum lycopersicum HOM05M002388 ORTHO05M004839 5.9e-107 390.2 205 98.5
Potri.005G141500 Populus trichocarpa HOM05M002388 ORTHO05M004839 4.4e-62 241.1 207 66.7
Glyma.01G189200 Glycine max HOM05M002388 ORTHO05M004839 1.7e-61 239.2 213 64.3
Potri.007G047500 Populus trichocarpa HOM05M002388 ORTHO05M004839 2.2e-61 238.8 207 64.7
Glyma.11G053000 Glycine max HOM05M002388 ORTHO05M004839 8.3e-61 236.9 208 63.9
AT5G67230 Arabidopsis thaliana HOM05M002388 ORTHO05M004839 1.5e-54 216.1 195 60.0
AT4G36890 Arabidopsis thaliana HOM05M002388 ORTHO05M004839 1.3e-53 213.0 208 59.1
Glyma.16G095800 Glycine max HOM05M002388 ORTHO05M004839 7.8e-51 203.8 207 56.0
Glyma.17G168400 Glycine max HOM05M002388 ORTHO05M004839 8.6e-50 200.3 207 58.0
p5.00_sc00004_p0108 Elaeis guineensis HOM05M002388 ORTHO05M004839 1.9e-49 199.1 204 56.4
CDE01G0400 Ceratophyllum demersum HOM05M002388 ORTHO05M004839 2.5e-49 198.7 198 55.6
Zosma03g23250 Zostera marina HOM05M002388 ORTHO05M004839 3.3e-49 198.4 208 55.3
DDU474G0001 Dioscorea dumetorum HOM05M002388 ORTHO05M004839 5.6e-49 197.6 219 54.3
DDU775G0141 Dioscorea dumetorum HOM05M002388 ORTHO05M004839 5.6e-49 197.6 219 54.3
Spipo10G0048400 Spirodela polyrhiza HOM05M002388 ORTHO05M004839 5.2e-47 191.0 181 60.2
CALSI_Maker00027226 Calamus simplicifolius HOM05M002388 ORTHO05M004839 4.4e-46 188.0 204 52.9
Asa8G03959 Allium sativum HOM05M002388 ORTHO05M004839 5.4e-44 181.0 195 54.9
Spipo25G0007700 Spirodela polyrhiza HOM05M002388 ORTHO05M004839 9.2e-44 180.3 224 51.8
ATR0762G014 Amborella trichopoda HOM05M002388 ORTHO05M004839 2.7e-43 178.7 200 51.0
p5.00_sc00037_p0086 Elaeis guineensis HOM05M002388 ORTHO05M004839 3.9e-42 174.9 213 48.8
Ma03_g20560 Musa acuminata HOM05M002388 ORTHO05M004839 4.7e-40 167.9 213 45.5
Ma08_g19860 Musa acuminata HOM05M002388 ORTHO05M004839 4.4e-38 161.4 230 43.9
Ma09_g10990 Musa acuminata HOM05M002388 ORTHO05M004839 4.4e-38 161.4 208 44.7
OsR498G0613212900.01 Oryza sativa ssp. indica HOM05M002388 ORTHO05M004839 4.4e-38 161.4 202 47.5
PH02Gene37058 Phyllostachys edulis HOM05M002388 ORTHO05M004839 1.3e-37 159.8 193 47.7
p5.00_sc00109_p0001 Elaeis guineensis HOM05M002388 ORTHO05M004839 8.4e-37 157.1 212 44.3
Zm00007a00019333 Zea mays B104 HOM05M002388 ORTHO05M004839 8.4e-37 157.1 218 44.5
OsKitaake06g260400 Oryza sativa Kitaake HOM05M002388 ORTHO05M004839 1.1e-36 156.8 202 46.5
Pahal.4G035700 Panicum hallii HOM05M002388 ORTHO05M004839 1.4e-36 156.4 201 46.3
EJB05_42024 Eragrostis curvula HOM05M002388 ORTHO05M004839 2.4e-36 155.6 240 42.1
Misin19G252000 Miscanthus sinensis HOM05M002388 ORTHO05M004839 3.2e-36 155.2 204 45.6
Sspon.08G0003210-3C Saccharum spontaneum HOM05M002388 ORTHO05M004839 4.2e-36 154.8 215 44.2
Zm00001eb273460 Zea mays B73 HOM05M002388 ORTHO05M004839 5.4e-36 154.5 218 44.5
Ot_Chr2_g16206 Oropetium thomaeum HOM05M002388 ORTHO05M004839 7.1e-36 154.1 218 45.4
Sspon.08G0003210-4D Saccharum spontaneum HOM05M002388 ORTHO05M004839 1.6e-35 152.9 208 45.7
Zm00001eb225770 Zea mays B73 HOM05M002388 ORTHO05M004839 2.1e-35 152.5 204 45.6
Sspon.08G0003210-3P Saccharum spontaneum HOM05M002388 ORTHO05M004839 2.7e-35 152.1 218 44.5
Dexi4B01G0020990 Digitaria exilis HOM05M002388 ORTHO05M004839 3.5e-35 151.8 200 44.0
GWHGAZTO073641 Oryza alta HOM05M002388 ORTHO05M004839 3.5e-35 151.8 206 45.1
GWHGAZTO088969 Oryza alta HOM05M002388 ORTHO05M004839 3.5e-35 151.8 207 45.4
Sspon.08G0003210-1A Saccharum spontaneum HOM05M002388 ORTHO05M004839 4.6e-35 151.4 208 45.2
Sspon.08G0003210-2B Saccharum spontaneum HOM05M002388 ORTHO05M004839 4.6e-35 151.4 208 45.2
Sobic.010G238800 Sorghum bicolor HOM05M002388 ORTHO05M004839 4.6e-35 151.4 218 44.5
CDE02G3038 Ceratophyllum demersum HOM05M002388 ORTHO05M004839 6.0e-35 151.0 99 69.7
CALSI_Maker00044059 Calamus simplicifolius HOM05M002388 ORTHO05M004839 1.0e-34 150.2 212 45.8
GWHGAORA057451 Cenchrus purpureus HOM05M002388 ORTHO05M004839 1.0e-34 150.2 194 46.4
Dexi4A01G0021740 Digitaria exilis HOM05M002388 ORTHO05M004839 1.0e-34 150.2 200 43.5
Ma04_g26890 Musa acuminata HOM05M002388 ORTHO05M004839 1.3e-34 149.8 205 42.9
HPP92_017364 Vanilla planifolia HOM05M002388 ORTHO05M004839 2.3e-34 149.1 95 73.7
Zm00007a00039069 Zea mays B104 HOM05M002388 ORTHO05M004839 8.7e-34 147.1 202 44.1
Zjn_sc00008.1.g02000.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M002388 ORTHO05M004839 1.1e-33 146.7 202 44.6
Seita.4G253800 Setaria italica HOM05M002388 ORTHO05M004839 1.9e-33 146.0 194 44.8
Sevir.4G266100 Setaria viridis HOM05M002388 ORTHO05M004839 1.9e-33 146.0 194 44.8
Horvu_MOREX_7H01G605900 Hordeum vulgare HOM05M002388 ORTHO05M004839 5.6e-33 144.4 193 44.6
Zjn_sc00068.1.g01620.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M002388 ORTHO05M004839 1.3e-32 143.3 202 43.6
Ma01_g09240 Musa acuminata HOM05M002388 ORTHO05M004839 1.6e-32 142.9 206 41.7
Ma03_g12800 Musa acuminata HOM05M002388 ORTHO05M004839 1.6e-32 142.9 184 45.1
GWHGASIY040193 Secale cereale HOM05M002388 ORTHO05M004839 6.2e-32 141.0 192 43.2
GWHGASIY040933 Secale cereale HOM05M002388 ORTHO05M004839 6.2e-32 141.0 192 43.2
AET7Gv21061600 Aegilops tauschii HOM05M002388 ORTHO05M004839 2.4e-31 139.0 240 38.8
TraesCS7D03G1019200 Triticum aestivum HOM05M002388 ORTHO05M004839 2.4e-31 139.0 240 38.8
TRIDC7AG061360 Triticum dicoccoides HOM05M002388 ORTHO05M004839 4.0e-31 138.3 239 39.3
TraesCS7A03G1069600 Triticum aestivum HOM05M002388 ORTHO05M004839 6.9e-31 137.5 190 43.2
TraesCS7B03G0912200 Triticum aestivum HOM05M002388 ORTHO05M004839 1.2e-30 136.7 193 42.5
V3.Lp_chr7_0.1G10984 Lolium perenne HOM05M002388 ORTHO05M004839 2.0e-30 136.0 190 43.2
Bradi1g33320 Brachypodium distachyon HOM05M002388 ORTHO05M004839 2.6e-30 135.6 191 42.9
SEGI_35989 Sequoiadendron giganteum HOM05M002388 ORTHO05M004839 3.4e-30 135.2 97 63.9
TRITD7Bv1G185250 Triticum turgidum HOM05M002388 ORTHO05M004839 7.6e-30 134.0 95 67.4
SMO172G0036 Selaginella moellendorffii HOM05M002388 ORTHO05M004839 9.9e-30 133.7 178 43.8
PH02Gene08988 Phyllostachys edulis HOM05M002388 ORTHO05M004839 8.4e-29 130.6 186 42.5
Mapoly0004s0253 Marchantia polymorpha HOM05M002388 ORTHO05M004839 3.2e-28 128.6 211 42.2
Asa6G07027 Allium sativum HOM05M002388 ORTHO05M004839 5.4e-28 127.9 167 43.1
CALSI_Maker00010147 Calamus simplicifolius HOM05M002388 ORTHO05M004839 3.7e-24 115.2 189 40.7
Pp3c9_16190 Physcomitrium patens HOM05M002388 ORTHO05M004839 2.6e-22 109.0 176 39.8
Glyma.05G096602 Glycine max HOM05M002388 ORTHO05M004839 3.8e-21 105.1 70 72.9
GWHGAORA029035 Cenchrus purpureus HOM05M002388 ORTHO05M004839 4.9e-21 104.8 70 71.4
OB06G33070 Oryza brachyantha HOM05M002388 ORTHO05M004839 6.4e-21 104.4 70 71.4
Pp3c15_16210 Physcomitrium patens HOM05M002388 ORTHO05M004839 8.4e-21 104.0 94 53.2
Aco011476 Ananas comosus HOM05M002388 ORTHO05M004839 2.7e-19 99.0 70 68.6
evm.TU.AsparagusV1_08.1874.V1.1 Asparagus officinalis HOM05M002388 ORTHO05M004839 2.3e-18 95.9 71 60.6
GWHGAORA057435 Cenchrus purpureus HOM05M002388 ORTHO05M004839 3.0e-18 95.5 64 71.9
Sspon.08G0003210-1P Saccharum spontaneum HOM05M002388 ORTHO05M004839 3.0e-18 95.5 64 71.9
evm.TU.AsparagusV1_05.3228.V1.1 Asparagus officinalis HOM05M002388 ORTHO05M004839 1.5e-17 93.2 64 68.8
Pp3c18_10000 Physcomitrium patens HOM05M002388 ORTHO05M004839 1.5e-17 93.2 197 35.5
Ot_Chr6_g01891 Oropetium thomaeum HOM05M002388 ORTHO05M010182 1.6e-16 89.7 198 32.8
Sspon.05G0022170-1B Saccharum spontaneum HOM05M002388 ORTHO05M010182 2.1e-16 89.4 210 33.3
Sspon.05G0022170-2C Saccharum spontaneum HOM05M002388 ORTHO05M010182 2.1e-16 89.4 194 35.1
GWHGASIY011450 Secale cereale HOM05M002388 ORTHO05M010182 2.4e-15 85.9 183 36.1
TraesCS2B03G1353400 Triticum aestivum HOM05M002388 ORTHO05M010182 3.1e-15 85.5 188 34.6
TraesCS2D03G1142300 Triticum aestivum HOM05M002388 ORTHO05M010182 3.1e-15 85.5 188 35.1
TRIDC2BG077780 Triticum dicoccoides HOM05M002388 ORTHO05M010182 3.1e-15 85.5 188 34.6
TRITD2Bv1G238410 Triticum turgidum HOM05M002388 ORTHO05M010182 3.1e-15 85.5 188 34.6
Zm00001eb432200 Zea mays B73 HOM05M002388 ORTHO05M010182 3.1e-15 85.5 193 35.2
Sevir.7G275700 Setaria viridis HOM05M002388 ORTHO05M010182 4.0e-15 85.1 183 34.4
Sspon.05G0022170-3D Saccharum spontaneum HOM05M002388 ORTHO05M010182 6.9e-15 84.3 195 35.4
Seita.7G264400 Setaria italica HOM05M002388 ORTHO05M010182 9.0e-15 84.0 183 33.9
TRIDC2AG071860 Triticum dicoccoides HOM05M002388 ORTHO05M010182 9.0e-15 84.0 188 35.1
Pahal.7G317000 Panicum hallii HOM05M002388 ORTHO05M010182 1.2e-14 83.6 181 33.7
Zm00007a00017502 Zea mays B104 HOM05M002388 ORTHO05M010182 1.5e-14 83.2 187 34.8
Zjn_sc00004.1.g11920.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M002388 ORTHO05M010182 1.5e-14 83.2 192 32.8
Horvu_MOREX_2H01G704600 Hordeum vulgare HOM05M002388 ORTHO05M010182 2.0e-14 82.8 180 33.9
EJB05_39931 Eragrostis curvula HOM05M002388 ORTHO05M010182 2.6e-14 82.4 206 32.0
Zm00007a00049414 Zea mays B104 HOM05M002388 ORTHO05M010182 2.6e-14 82.4 173 35.3
Zjn_sc00023.1.g04860.1.am.mk Zoysia japonica ssp. nagirizaki HOM05M002388 ORTHO05M010182 2.6e-14 82.4 193 30.6
PH02Gene45587 Phyllostachys edulis HOM05M002388 ORTHO05M010182 3.4e-14 82.0 180 32.8
Sobic.006G242100 Sorghum bicolor HOM05M002388 ORTHO05M010182 3.4e-14 82.0 195 34.4
AET2Gv21122500 Aegilops tauschii HOM05M002388 ORTHO05M010182 4.5e-14 81.6 188 34.6
Dexi7B01G0021780 Digitaria exilis HOM05M002388 ORTHO05M010182 4.5e-14 81.6 208 31.7
Dexi7A01G0021070 Digitaria exilis HOM05M002388 ORTHO05M010182 5.8e-14 81.3 187 32.1
Misin11G238000 Miscanthus sinensis HOM05M002388 ORTHO05M010182 5.8e-14 81.3 195 33.8
PH02Gene00471 Phyllostachys edulis HOM05M002388 ORTHO05M010182 5.8e-14 81.3 176 32.4
GWHGAORA021026 Cenchrus purpureus HOM05M002388 ORTHO05M010182 1.0e-13 80.5 91 47.3
GWHGAORA021041 Cenchrus purpureus HOM05M002388 ORTHO05M010182 1.0e-13 80.5 91 47.3
GWHGAORA063388 Cenchrus purpureus HOM05M002388 ORTHO05M010182 1.0e-13 80.5 91 47.3
GWHGAZTO045806 Oryza alta HOM05M002388 ORTHO05M010182 1.0e-13 80.5 174 32.2
OsKitaake04g287800 Oryza sativa Kitaake HOM05M002388 ORTHO05M010182 1.0e-13 80.5 176 33.5
OsR498G0409391400.01 Oryza sativa ssp. indica HOM05M002388 ORTHO05M010182 1.0e-13 80.5 176 33.5
Os04g0650366 Oryza sativa ssp. japonica HOM05M002388 ORTHO05M010182 1.0e-13 80.5 176 33.5
Bradi5g24290 Brachypodium distachyon HOM05M002388 ORTHO05M010182 2.9e-13 79.0 186 33.9
Misin12G251300 Miscanthus sinensis HOM05M002388 ORTHO05M010182 2.9e-13 79.0 190 33.2
GWHGAZTO031822 Oryza alta HOM05M002388 ORTHO05M001149 3.5e-11 72.0 85 47.1
Zm00001eb068390 Zea mays B73 HOM05M002388 ORTHO05M010182 3.9e-10 68.6 186 32.3
V3.Lp_chr2_0G22906 Lolium perenne HOM05M002388 ORTHO05M010182 8.7e-10 67.4 153 36.6
TRIDC7BG054390 Triticum dicoccoides HOM05M002388 ORTHO05M004839 1.9e-09 66.2 40 72.5
Sspon.05G0036960-1D Saccharum spontaneum HOM05M002388 ORTHO05M010182 5.7e-09 64.7 195 31.8
Zm00007a00020317 Zea mays B104 HOM05M002388 ORTHO05M010182 1.3e-08 63.5 173 31.2
Sspon.05G0022170-1P Saccharum spontaneum HOM05M002388 ORTHO05M010182 2.2e-08 62.8 195 33.3
Zm00001eb091040 Zea mays B73 HOM05M002388 ORTHO05M010182 2.8e-08 62.4 137 35.0
AagrBONN_evm.TU.Sc2ySwM_369.389 Anthoceros agrestis HOM05M002388 ORTHO05M004839 1.1e-07 60.5 48 56.2
HPP92_017363 Vanilla planifolia HOM05M002388 ORTHO05M033631 1.4e-07 60.1 62 56.5
CALSI_Maker00015472 Calamus simplicifolius HOM05M002388 ORTHO05M004839 1.8e-07 59.7 68 54.4
SMO174G0138 Selaginella moellendorffii HOM05M002388 ORTHO05M235364 1.2e-06 57.0 205 29.3
Zm00001eb231480 Zea mays B73 HOM05M002388 ORTHO05M010182 5.9e-06 54.7 125 32.0

Aegilops tauschii (2 genes)
Allium sativum (2 genes)
Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Anthoceros agrestis (1 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (4 genes)
Cenchrus purpureus (6 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (4 genes)
Dioscorea dumetorum (2 genes)
Elaeis guineensis (3 genes)
Eragrostis curvula (2 genes)
Glycine max (5 genes)
Hordeum vulgare (2 genes)
Lolium perenne (2 genes)
Magnolia biondii (0 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (6 genes)
Oropetium thomaeum (2 genes)
Oryza alta (4 genes)
Oryza brachyantha (1 genes)
Oryza sativa Kitaake (2 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (1 genes)
Panicum hallii (2 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (3 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (11 genes)
Secale cereale (3 genes)
Selaginella moellendorffii (2 genes)
Sequoiadendron giganteum (1 genes)
Setaria italica (2 genes)
Setaria viridis (2 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (5 genes)
Triticum dicoccoides (4 genes)
Triticum turgidum (2 genes)
Vanilla planifolia (2 genes)
Zea mays B73 (6 genes)
Zea mays B104 (5 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (4 genes)

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