Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
OsKitaake11g107600 Oryza sativa Kitaake HOM05M003260 ORTHO05M003786 2.4e-240 834.7 556 100.0
Os11g0296800 Oryza sativa ssp. japonica HOM05M003260 ORTHO05M003786 1.2e-239 832.4 556 99.8
OsR498G1119857100.01 Oryza sativa ssp. indica HOM05M003260 ORTHO05M003786 1.5e-237 825.5 556 98.4
GWHGAZTO011364 Oryza alta HOM05M003260 ORTHO05M003786 1.5e-210 735.7 557 89.0
OB0046G10030 Oryza brachyantha HOM05M003260 ORTHO05M003786 1.3e-196 689.5 579 83.6
GWHGAZTO063476 Oryza alta HOM05M003260 ORTHO05M003786 2.1e-196 688.7 556 87.6
PH02Gene20802 Phyllostachys edulis HOM05M003260 ORTHO05M003786 5.1e-166 587.8 528 78.2
PH02Gene33255 Phyllostachys edulis HOM05M003260 ORTHO05M003786 1.3e-156 556.6 626 64.7
Pahal.7G249500 Panicum hallii HOM05M003260 ORTHO05M003786 5.7e-149 531.2 561 71.5
Sspon.05G0005580-1P Saccharum spontaneum HOM05M003260 ORTHO05M003786 5.7e-149 531.2 558 70.4
Misin11G170300 Miscanthus sinensis HOM05M003260 ORTHO05M003786 1.6e-146 523.1 557 72.4
Sspon.05G0005580-1A Saccharum spontaneum HOM05M003260 ORTHO05M003786 2.0e-146 522.7 565 71.0
Sspon.05G0005580-2B Saccharum spontaneum HOM05M003260 ORTHO05M003786 2.0e-146 522.7 565 71.0
Sevir.7G207200 Setaria viridis HOM05M003260 ORTHO05M003786 2.2e-145 519.2 568 69.0
Sspon.05G0005580-3D Saccharum spontaneum HOM05M003260 ORTHO05M003786 2.9e-145 518.8 558 67.7
Misin12G176700 Miscanthus sinensis HOM05M003260 ORTHO05M003786 7.2e-144 514.2 566 70.3
Ot_Chr6_g12333 Oropetium thomaeum HOM05M003260 ORTHO05M003786 1.4e-142 510.0 559 68.9
Seita.7G195100 Setaria italica HOM05M003260 ORTHO05M003786 2.0e-138 496.1 568 68.1
Sobic.006G174850 Sorghum bicolor HOM05M003260 ORTHO05M003786 5.9e-138 494.6 590 66.9
Horvu_MOREX_6H01G121800 Hordeum vulgare HOM05M003260 ORTHO05M003786 2.6e-133 479.2 534 68.7
EJB05_38426 Eragrostis curvula HOM05M003260 ORTHO05M003786 1.7e-132 476.5 545 63.9
Zjn_sc00004.1.g07000.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M003260 ORTHO05M003786 3.7e-132 475.3 553 64.7
Zm00007a00014836 Zea mays B104 HOM05M003260 ORTHO05M003786 2.4e-131 472.6 569 67.0
AET6Gv20271500 Aegilops tauschii HOM05M003260 ORTHO05M003786 1.2e-130 470.3 581 64.5
Zm00001eb429410 Zea mays B73 HOM05M003260 ORTHO05M003786 1.2e-130 470.3 576 65.8
GWHGASIY030987 Secale cereale HOM05M003260 ORTHO05M003786 3.5e-130 468.8 600 63.2
TraesCS6A03G0243000 Triticum aestivum HOM05M003260 ORTHO05M003786 4.5e-130 468.4 589 64.0
TraesCS6D03G0200300 Triticum aestivum HOM05M003260 ORTHO05M003786 5.9e-130 468.0 581 64.7
Bradi2g16740 Brachypodium distachyon HOM05M003260 ORTHO05M003786 7.7e-130 467.6 519 70.3
GWHGASIY031052 Secale cereale HOM05M003260 ORTHO05M003786 1.7e-129 466.5 602 63.0
TRITD6Av1G030600 Triticum turgidum HOM05M003260 ORTHO05M003786 6.4e-124 448.0 589 63.0
V3.Lp_chr6_0G1420 Lolium perenne HOM05M003260 ORTHO05M003786 9.2e-123 444.1 530 64.0
TraesCS6B03G0334200 Triticum aestivum HOM05M003260 ORTHO05M003786 3.3e-120 435.6 580 63.3
TRITD6Bv1G043870 Triticum turgidum HOM05M003260 ORTHO05M003786 2.1e-119 433.0 580 63.1
TRIDC6AG013480 Triticum dicoccoides HOM05M003260 ORTHO05M003786 3.6e-119 432.2 619 59.9
Zm00007a00030203 Zea mays B104 HOM05M003260 ORTHO05M003786 2.2e-116 422.9 577 61.7
Dexi7A01G0015170 Digitaria exilis HOM05M003260 ORTHO05M003786 1.8e-86 323.6 552 47.1
TRIDC6BG018910 Triticum dicoccoides HOM05M003260 ORTHO05M003786 2.7e-74 283.1 429 61.8
Zjn_sc00056.1.g04630.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M003260 ORTHO05M003786 4.3e-72 275.8 529 40.3
Zm00001eb074340 Zea mays B73 HOM05M003260 ORTHO05M003786 5.5e-51 205.7 380 58.9
CALSI_Maker00025729 Calamus simplicifolius HOM05M003260 ORTHO05M003786 1.8e-49 200.7 475 35.2
p5.00_sc00042_p0113 Elaeis guineensis HOM05M003260 ORTHO05M003786 2.2e-44 183.7 530 32.5
p5.00_sc00010_p0132 Elaeis guineensis HOM05M003260 ORTHO05M003786 1.0e-41 174.9 522 33.0
CALSI_Maker00032791 Calamus simplicifolius HOM05M003260 ORTHO05M003786 3.1e-38 163.3 555 31.7
CALSI_Maker00035590 Calamus simplicifolius HOM05M003260 ORTHO05M003786 7.7e-37 158.7 565 31.2
Ma02_g14730 Musa acuminata HOM05M003260 ORTHO05M003786 2.2e-36 157.1 491 31.0
evm.TU.AsparagusV1_02.463.V1.1 Asparagus officinalis HOM05M003260 ORTHO05M003786 2.5e-35 153.7 516 30.2
GWHGAZTO019948 Oryza alta HOM05M003260 ORTHO05M003786 3.2e-35 153.3 488 33.2
PH02Gene20342 Phyllostachys edulis HOM05M003260 ORTHO05M003786 7.2e-35 152.1 485 33.0
Aco002316 Ananas comosus HOM05M003260 ORTHO05M003786 3.6e-34 149.8 541 37.0
GWHGAZTO071609 Oryza alta HOM05M003260 ORTHO05M003786 5.3e-30 136.0 514 30.2
EJB05_20332 Eragrostis curvula HOM05M003260 ORTHO05M003786 8.5e-28 128.6 488 32.0
EJB05_20367 Eragrostis curvula HOM05M003260 ORTHO05M003786 2.5e-27 127.1 488 31.8
Asa8G03813 Allium sativum HOM05M003260 ORTHO05M003786 3.2e-27 126.7 490 30.6
Horvu_MOREX_6H01G379500 Hordeum vulgare HOM05M003260 ORTHO05M003786 3.0e-25 120.2 551 29.6
Ot_Chr1_g21214 Oropetium thomaeum HOM05M003260 ORTHO05M003786 5.2e-25 119.4 496 31.5
HPP92_024603 Vanilla planifolia HOM05M003260 ORTHO05M003786 5.2e-25 119.4 536 29.1
AET6Gv20640700 Aegilops tauschii HOM05M003260 ORTHO05M003786 1.2e-24 118.2 560 30.4
TraesCS6D03G0559700 Triticum aestivum HOM05M003260 ORTHO05M003786 1.2e-24 118.2 560 30.4
CDE10G0903 Ceratophyllum demersum HOM05M003260 ORTHO05M003786 1.5e-24 117.9 519 35.8
Potri.005G148700 Populus trichocarpa HOM05M003260 ORTHO05M003786 9.8e-24 115.2 318 34.6
p5.00_sc00008_p0264 Elaeis guineensis HOM05M003260 ORTHO05M003786 1.3e-23 114.8 582 27.5
TraesCS6B03G0806200 Triticum aestivum HOM05M003260 ORTHO05M003786 1.7e-23 114.4 555 28.5
TRITD6Bv1G143420 Triticum turgidum HOM05M003260 ORTHO05M003786 1.7e-23 114.4 555 28.5
OsR498G0204476600.01 Oryza sativa ssp. indica HOM05M003260 ORTHO05M003786 2.8e-23 113.6 486 31.5
Bradi3g51030 Brachypodium distachyon HOM05M003260 ORTHO05M003786 1.4e-22 111.3 520 29.0
OsKitaake02g278200 Oryza sativa Kitaake HOM05M003260 ORTHO05M003786 1.4e-22 111.3 486 31.3
Os02g0664400 Oryza sativa ssp. japonica HOM05M003260 ORTHO05M003786 1.4e-22 111.3 486 31.3
Sobic.004G289900 Sorghum bicolor HOM05M003260 ORTHO05M003786 1.8e-22 110.9 321 37.7
MBI16_g20893_MAGBIO Magnolia biondii HOM05M003260 ORTHO05M003786 5.4e-22 109.4 165 40.0
TraesCS6A03G0669500 Triticum aestivum HOM05M003260 ORTHO05M003786 5.4e-22 109.4 549 30.2
TRITD6Av1G156840 Triticum turgidum HOM05M003260 ORTHO05M003786 5.4e-22 109.4 549 30.2
Misin08G231500 Miscanthus sinensis HOM05M003260 ORTHO05M003786 7.0e-22 109.0 493 30.4
GWHGASIY042803 Secale cereale HOM05M003260 ORTHO05M003786 9.1e-22 108.6 548 28.3
V3.Lp_chr6_0G13096 Lolium perenne HOM05M003260 ORTHO05M003786 3.5e-21 106.7 539 27.6
MisinT494600 Miscanthus sinensis HOM05M003260 ORTHO05M003786 5.9e-21 105.9 487 30.6
CDE10G0649 Ceratophyllum demersum HOM05M003260 ORTHO05M003786 1.0e-20 105.1 519 36.0
Sspon.04G0006790-1T Saccharum spontaneum HOM05M003260 ORTHO05M003786 2.9e-20 103.6 497 30.4
Sspon.04G0006790-2B Saccharum spontaneum HOM05M003260 ORTHO05M003786 2.9e-20 103.6 497 30.4
DDU527G0003 Dioscorea dumetorum HOM05M003260 ORTHO05M003786 3.8e-20 103.2 292 33.9
Dexi7B01G0015910 Digitaria exilis HOM05M003260 ORTHO05M003786 5.0e-20 102.8 86 69.8
ATR0584G133 Amborella trichopoda HOM05M003260 ORTHO05M003786 2.5e-19 100.5 500 27.2
Zm00001eb186830 Zea mays B73 HOM05M003260 ORTHO05M003786 4.2e-19 99.8 296 35.5
DDU681G0133 Dioscorea dumetorum HOM05M003260 ORTHO05M003786 1.2e-18 98.2 511 26.0
GWHGAORA060145 Cenchrus purpureus HOM05M003260 ORTHO05M003786 1.6e-18 97.8 182 46.7
Ma06_g32800 Musa acuminata HOM05M003260 ORTHO05M003786 6.1e-18 95.9 598 33.9
ATR0706G065 Amborella trichopoda HOM05M003260 ORTHO05M003786 2.3e-17 94.0 532 27.4
Dexi1B01G0021610 Digitaria exilis HOM05M003260 ORTHO05M003786 8.8e-17 92.0 272 36.0
Sspon.04G0006790-1A Saccharum spontaneum HOM05M003260 ORTHO05M003786 2.0e-16 90.9 548 30.8
GWHGAORA024738 Cenchrus purpureus HOM05M003260 ORTHO05M003786 2.6e-16 90.5 180 44.4
Glyma.08G272800 Glycine max HOM05M003260 ORTHO05M003786 4.4e-16 89.7 492 33.1
AT2G22720 Arabidopsis thaliana HOM05M003260 ORTHO05M003786 5.7e-16 89.4 233 36.1
Zm00007a00034469 Zea mays B104 HOM05M003260 ORTHO05M003786 5.7e-16 89.4 484 28.9
Potri.007G009700 Populus trichocarpa HOM05M003260 ORTHO05M003786 9.8e-16 88.6 320 31.9
Seita.1G263700 Setaria italica HOM05M003260 ORTHO05M003786 1.7e-15 87.8 221 38.9
evm.TU.AsparagusV1_09.1358.V1.1 Asparagus officinalis HOM05M003260 ORTHO05M003786 4.9e-15 86.3 539 28.2
OB02G34240 Oryza brachyantha HOM05M003260 ORTHO05M003786 1.1e-14 85.1 160 41.9
TRIDC6BG044950 Triticum dicoccoides HOM05M003260 ORTHO05M003786 1.1e-14 85.1 225 37.3
Pahal.1G338700 Panicum hallii HOM05M003260 ORTHO05M003786 1.8e-14 84.3 544 28.1
Glyma.01G097200 Glycine max HOM05M003260 ORTHO05M003786 4.5e-13 79.7 222 33.8
TRIDC6AG037990 Triticum dicoccoides HOM05M003260 ORTHO05M003786 5.9e-13 79.3 213 35.7
AT4G37860 Arabidopsis thaliana HOM05M003260 ORTHO05M003786 1.1e-11 75.1 267 30.7
Solyc02g091730.3 Solanum lycopersicum HOM05M003260 ORTHO05M003786 1.9e-11 74.3 323 27.9
Zjn_sc00007.1.g09910.1.am.mk Zoysia japonica ssp. nagirizaki HOM05M003260 ORTHO05M003786 3.3e-11 73.6 209 36.8
Sevir.1G268500 Setaria viridis HOM05M003260 ORTHO05M003786 1.2e-10 71.6 489 35.4
Solyc03g043760.4 Solanum lycopersicum HOM05M003260 ORTHO05M003786 2.1e-10 70.9 326 29.4
SEGI_33741 Sequoiadendron giganteum HOM05M003260 ORTHO05M003786 2.0e-08 64.3 483 24.6
Zjn_sc00022.1.g06320.1.sm.mk Zoysia japonica ssp. nagirizaki HOM05M003260 ORTHO05M003786 4.1e-06 56.6 106 34.9

Aegilops tauschii (2 genes)
Allium sativum (1 genes)
Amborella trichopoda (2 genes)
Ananas comosus (1 genes)
Anthoceros agrestis (0 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (3 genes)
Cenchrus purpureus (2 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (3 genes)
Dioscorea dumetorum (2 genes)
Elaeis guineensis (3 genes)
Eragrostis curvula (3 genes)
Glycine max (2 genes)
Hordeum vulgare (2 genes)
Lolium perenne (2 genes)
Magnolia biondii (1 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (4 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (2 genes)
Oryza alta (4 genes)
Oryza brachyantha (2 genes)
Oryza sativa Kitaake (2 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (2 genes)
Panicum hallii (2 genes)
Phyllostachys edulis (3 genes)
Physcomitrium patens (0 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (7 genes)
Secale cereale (3 genes)
Selaginella moellendorffii (0 genes)
Sequoiadendron giganteum (1 genes)
Setaria italica (2 genes)
Setaria viridis (2 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (0 genes)
Triticum aestivum (6 genes)
Triticum dicoccoides (4 genes)
Triticum turgidum (4 genes)
Vanilla planifolia (1 genes)
Zea mays B73 (3 genes)
Zea mays B104 (3 genes)
Zostera marina (0 genes)
Zoysia japonica ssp. nagirizaki (4 genes)

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