Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
OsKitaake11g011301 Oryza sativa Kitaake HOM05M003127 ORTHO05M003516 3.3e-86 320.9 157 100.0
Os11g0120725 Oryza sativa ssp. japonica HOM05M003127 ORTHO05M003516 1.3e-85 318.9 157 99.4
GWHGAZTO013446 Oryza alta HOM05M003127 ORTHO05M003516 2.0e-67 258.5 157 82.8
OB12G11260 Oryza brachyantha HOM05M003127 ORTHO05M003516 4.5e-67 257.3 155 81.3
GWHGAZTO062456 Oryza alta HOM05M003127 ORTHO05M003516 8.5e-66 253.1 157 80.3
OsKitaake12g015700 Oryza sativa Kitaake HOM05M003127 ORTHO05M003516 9.1e-60 233.0 157 77.7
Seita.7G304700 Setaria italica HOM05M003127 ORTHO05M003516 1.4e-55 219.2 154 67.5
TraesCS5B03G0398800 Triticum aestivum HOM05M003127 ORTHO05M003516 1.4e-55 219.2 155 67.1
TraesCS5D03G0368300 Triticum aestivum HOM05M003127 ORTHO05M003516 1.4e-55 219.2 155 67.1
Pahal.3G011000 Panicum hallii HOM05M003127 ORTHO05M003516 5.1e-55 217.2 153 67.3
OsKitaake12g015500 Oryza sativa Kitaake HOM05M003127 ORTHO05M003516 8.8e-55 216.5 153 68.0
TRITD5Bv1G091790 Triticum turgidum HOM05M003127 ORTHO05M003516 1.1e-54 216.1 154 66.9
OsKitaake11g011100 Oryza sativa Kitaake HOM05M003127 ORTHO05M003516 5.7e-54 213.8 153 66.7
Os11g0120600 Oryza sativa ssp. japonica HOM05M003127 ORTHO05M003516 5.7e-54 213.8 153 66.7
TraesCS4A03G0513100 Triticum aestivum HOM05M003127 ORTHO05M003516 4.8e-53 210.7 154 64.9
TRITD4Av1G154860 Triticum turgidum HOM05M003127 ORTHO05M003516 4.8e-53 210.7 154 64.9
PH02Gene49597 Phyllostachys edulis HOM05M003127 ORTHO05M003516 9.1e-52 206.5 146 67.8
GWHGAZTO013444 Oryza alta HOM05M003127 ORTHO05M003516 1.6e-51 205.7 155 63.9
TRITD4Bv1G051070 Triticum turgidum HOM05M003127 ORTHO05M003516 1.6e-51 205.7 153 62.7
GWHGAZTO065429 Oryza alta HOM05M003127 ORTHO05M003516 2.0e-51 205.3 153 65.4
OB11G11000 Oryza brachyantha HOM05M003127 ORTHO05M003516 2.6e-51 204.9 153 66.0
OB12G11230 Oryza brachyantha HOM05M003127 ORTHO05M003516 1.0e-50 203.0 153 65.4
Ot_Chr2_g22111 Oropetium thomaeum HOM05M003127 ORTHO05M003516 5.0e-50 200.7 153 64.7
GWHGAZTO010217 Oryza alta HOM05M003127 ORTHO05M003516 1.1e-49 199.5 181 56.9
Dexi3A01G0001150 Digitaria exilis HOM05M003127 ORTHO05M003516 1.5e-49 199.1 154 63.6
GWHGAZTO062455 Oryza alta HOM05M003127 ORTHO05M003516 1.5e-49 199.1 191 53.4
Horvu_MOREX_5H01G251500 Hordeum vulgare HOM05M003127 ORTHO05M003516 2.5e-49 198.4 159 61.0
TraesCS4B03G0285800 Triticum aestivum HOM05M003127 ORTHO05M003516 3.2e-49 198.0 160 60.0
EJB05_02018 Eragrostis curvula HOM05M003127 ORTHO05M003516 2.1e-48 195.3 167 60.5
GWHGASIY025463 Secale cereale HOM05M003127 ORTHO05M003516 4.7e-48 194.1 155 61.9
GWHGAORA043074 Cenchrus purpureus HOM05M003127 ORTHO05M003516 8.0e-48 193.4 165 58.8
Seita.8G009900 Setaria italica HOM05M003127 ORTHO05M003516 2.3e-47 191.8 155 61.9
Dexi8B01G0001100 Digitaria exilis HOM05M003127 ORTHO05M003516 3.0e-47 191.4 158 62.0
GWHGAORA010746 Cenchrus purpureus HOM05M003127 ORTHO05M003516 6.7e-47 190.3 160 58.8
GWHGAORA040272 Cenchrus purpureus HOM05M003127 ORTHO05M003516 1.1e-46 189.5 165 57.0
Ma11_g06240 Musa acuminata HOM05M003127 ORTHO05M003516 1.1e-46 189.5 153 61.4
Glyma.18G049100 Glycine max HOM05M003127 ORTHO05M003516 2.0e-46 188.7 156 57.1
GWHGASIY043107 Secale cereale HOM05M003127 ORTHO05M003516 3.3e-46 188.0 160 58.1
GWHGASIY019373 Secale cereale HOM05M003127 ORTHO05M003516 4.4e-46 187.6 160 58.1
Sspon.07G0017370-1A Saccharum spontaneum HOM05M003127 ORTHO05M003516 5.7e-46 187.2 177 55.9
GWHGAZTO010219 Oryza alta HOM05M003127 ORTHO05M003516 1.3e-45 186.0 122 73.8
p5.00_sc00015_p0081 Elaeis guineensis HOM05M003127 ORTHO05M003516 3.7e-45 184.5 160 59.4
Spipo3G0010300 Spirodela polyrhiza HOM05M003127 ORTHO05M003516 6.3e-45 183.7 153 58.8
EJB05_29843 Eragrostis curvula HOM05M003127 ORTHO05M003516 8.2e-45 183.3 149 60.4
V3.Lp_chr4_0G12740 Lolium perenne HOM05M003127 ORTHO05M003516 8.2e-45 183.3 177 54.2
AT5G58240 Arabidopsis thaliana HOM05M003127 ORTHO05M003516 1.4e-44 182.6 153 55.6
SEGI_00344 Sequoiadendron giganteum HOM05M003127 ORTHO05M003516 4.1e-44 181.0 151 58.3
Sobic.008G024800 Sorghum bicolor HOM05M003127 ORTHO05M003516 4.1e-44 181.0 190 52.6
Zm00001eb265500 Zea mays B73 HOM05M003127 ORTHO05M003516 4.1e-44 181.0 158 58.9
Zm00007a00046251 Zea mays B104 HOM05M003127 ORTHO05M003516 4.1e-44 181.0 158 58.9
Bradi4g25998 Brachypodium distachyon HOM05M003127 ORTHO05M003516 5.3e-44 180.6 171 55.0
Misin14G048700 Miscanthus sinensis HOM05M003127 ORTHO05M003516 7.0e-44 180.3 203 48.8
OsR498G1119336300.01 Oryza sativa ssp. indica HOM05M003127 ORTHO05M003516 1.2e-43 179.5 91 97.8
Aco000581 Ananas comosus HOM05M003127 ORTHO05M003516 2.7e-43 178.3 187 51.9
Zosma06g10510 Zostera marina HOM05M003127 ORTHO05M003516 1.7e-42 175.6 153 57.5
CALSI_Maker00029037 Calamus simplicifolius HOM05M003127 ORTHO05M003516 1.9e-41 172.2 153 58.8
Sspon.07G0028770-1B Saccharum spontaneum HOM05M003127 ORTHO05M003516 1.9e-41 172.2 179 50.3
p5.00_sc00003_p0361 Elaeis guineensis HOM05M003127 ORTHO05M003516 3.2e-41 171.4 153 58.2
AagrBONN_evm.TU.Sc2ySwM_228.3513 Anthoceros agrestis HOM05M003127 ORTHO05M003516 4.2e-41 171.0 158 55.7
EJB05_29829 Eragrostis curvula HOM05M003127 ORTHO05M003516 4.7e-40 167.5 118 71.2
MBI03_g31633_MAGBIO Magnolia biondii HOM05M003127 ORTHO05M003516 3.0e-39 164.9 153 53.6
MCO06G292 Micromonas commoda HOM05M003127 ORTHO05M003516 1.5e-38 162.5 153 52.3
TraesCS5A03G0401900 Triticum aestivum HOM05M003127 ORTHO05M003516 2.6e-38 161.8 155 53.5
CALSI_Maker00029702 Calamus simplicifolius HOM05M003127 ORTHO05M003516 3.4e-38 161.4 166 51.8
MisinT399200 Miscanthus sinensis HOM05M003127 ORTHO05M003516 9.8e-38 159.8 114 70.2
Glyma.11G201800 Glycine max HOM05M003127 ORTHO05M003516 1.3e-37 159.5 148 55.4
DDU330G0032 Dioscorea dumetorum HOM05M003127 ORTHO05M003516 1.7e-37 159.1 176 49.4
DDU477G0232 Dioscorea dumetorum HOM05M003127 ORTHO05M003516 1.7e-37 159.1 176 49.4
Glyma.18G049000 Glycine max HOM05M003127 ORTHO05M003516 2.2e-37 158.7 150 56.0
Misin19G049300 Miscanthus sinensis HOM05M003127 ORTHO05M003516 2.2e-37 158.7 114 69.3
Bradi4g44190 Brachypodium distachyon HOM05M003127 ORTHO05M003516 2.8e-37 158.3 114 68.4
SMO351G0049 Selaginella moellendorffii HOM05M003127 ORTHO05M003516 4.8e-37 157.5 156 51.3
Asa0G02957 Allium sativum HOM05M003127 ORTHO05M003516 6.3e-37 157.1 122 62.3
Os12g0120400 Oryza sativa ssp. japonica HOM05M003127 ORTHO05M003516 6.3e-37 157.1 82 89.0
Sspon.07G0017370-2C Saccharum spontaneum HOM05M003127 ORTHO05M003516 6.3e-37 157.1 152 54.6
Cre17.g698266 Chlamydomonas reinhardtii HOM05M003127 ORTHO05M003516 2.0e-35 152.1 165 48.5
SMO163G0095 Selaginella moellendorffii HOM05M003127 ORTHO05M003516 2.0e-35 152.1 172 47.1
HPP92_015444 Vanilla planifolia HOM05M003127 ORTHO05M003516 2.7e-35 151.8 119 61.3
CBR_g39157 Chara braunii HOM05M003127 ORTHO05M003516 3.5e-35 151.4 151 53.0
PRCOL_00000589 Prasinoderma coloniale HOM05M003127 ORTHO05M003516 1.0e-34 149.8 154 51.3
Asa3G01431 Allium sativum HOM05M003127 ORTHO05M003516 2.9e-34 148.3 126 58.7
Potri.013G161100 Populus trichocarpa HOM05M003127 ORTHO05M003516 2.9e-34 148.3 121 61.2
Dexi3B01G0001260 Digitaria exilis HOM05M003127 ORTHO05M003516 6.5e-34 147.1 153 51.0
CBR_g3497 Chara braunii HOM05M005709 ORTHO05M006984 1.1e-33 146.4 158 48.7
V3.Lp_chr5_0G8630 Lolium perenne HOM05M003127 ORTHO05M003516 2.1e-32 142.1 155 49.7
Potri.019G133200 Populus trichocarpa HOM05M003127 ORTHO05M003516 1.5e-30 136.0 110 59.1
evm.TU.AsparagusV1_02.1352.V1.1 Asparagus officinalis HOM05M003127 ORTHO05M003516 4.4e-30 134.4 156 46.8
ATR0743G223 Amborella trichopoda HOM05M003127 ORTHO05M003516 9.8e-30 133.3 113 58.4
GWHGAORA043082 Cenchrus purpureus HOM05M003127 ORTHO05M003516 1.7e-29 132.5 143 53.1
CDE08G1523 Ceratophyllum demersum HOM05M003127 ORTHO05M003516 1.7e-29 132.5 114 57.0
Ma11_g06220 Musa acuminata HOM05M003127 ORTHO05M003516 2.8e-29 131.7 121 58.7
Misin19G048800 Miscanthus sinensis HOM05M003127 ORTHO05M003516 3.7e-29 131.3 151 51.0
Pp3c4_3210 Physcomitrium patens HOM05M003127 ORTHO05M003516 7.0e-28 127.1 121 51.2
Dexi8A01G0001120 Digitaria exilis HOM05M003127 ORTHO05M003516 2.9e-26 121.7 158 44.9
GWHGAZTO050256 Oryza alta HOM05M003127 ORTHO05M003516 4.4e-22 107.8 122 43.4
CALSI_Maker00045317 Calamus simplicifolius HOM05M003127 ORTHO05M003516 2.2e-21 105.5 101 51.5
EJB05_29844 Eragrostis curvula HOM05M003127 ORTHO05M003516 2.4e-20 102.1 74 70.3
Pahal.8G011832 Panicum hallii HOM05M003127 ORTHO05M003516 3.0e-18 95.1 75 64.0
GWHGAORA005648 Cenchrus purpureus HOM05M003127 ORTHO05M003516 1.8e-15 85.9 161 34.2
MBI03_g31635_MAGBIO Magnolia biondii HOM05M003127 ORTHO05M003516 3.1e-15 85.1 72 61.1
MBI03_g31636_MAGBIO Magnolia biondii HOM05M003127 ORTHO05M003516 6.4e-13 77.4 73 56.2
Os09g0246250 Oryza sativa ssp. japonica HOM05M003127 ORTHO05M003516 2.4e-12 75.5 49 57.1
Solyc09g018630.3 Solanum lycopersicum HOM05M003127 ORTHO05M003516 7.0e-12 73.9 47 66.0
OB11G11030 Oryza brachyantha HOM05M003127 ORTHO05M003516 1.3e-10 69.7 43 72.1

Aegilops tauschii (0 genes)
Allium sativum (2 genes)
Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Anthoceros agrestis (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (3 genes)
Cenchrus purpureus (5 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (2 genes)
Chlamydomonas reinhardtii (1 genes)
Digitaria exilis (4 genes)
Dioscorea dumetorum (2 genes)
Elaeis guineensis (2 genes)
Eragrostis curvula (4 genes)
Glycine max (3 genes)
Hordeum vulgare (1 genes)
Lolium perenne (2 genes)
Magnolia biondii (3 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (4 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (1 genes)
Oryza alta (8 genes)
Oryza brachyantha (4 genes)
Oryza sativa Kitaake (4 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (4 genes)
Panicum hallii (2 genes)
Phyllostachys edulis (1 genes)
Physcomitrium patens (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (1 genes)
Saccharum spontaneum (3 genes)
Secale cereale (3 genes)
Selaginella moellendorffii (2 genes)
Sequoiadendron giganteum (1 genes)
Setaria italica (2 genes)
Setaria viridis (0 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (5 genes)
Triticum dicoccoides (0 genes)
Triticum turgidum (3 genes)
Vanilla planifolia (1 genes)
Zea mays B73 (1 genes)
Zea mays B104 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (0 genes)

Program Settings