Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
OsKitaake11g170600 Oryza sativa Kitaake HOM05M006269 ORTHO05M007532 1.5e-198 695.3 375 100.0
Os11g0568600 Oryza sativa ssp. japonica HOM05M006269 ORTHO05M007532 1.5e-198 695.3 375 100.0
OsR498G1120379700.01 Oryza sativa ssp. indica HOM05M006269 ORTHO05M007532 4.5e-198 693.7 375 99.7
GWHGAZTO064500 Oryza alta HOM05M006269 ORTHO05M007532 3.9e-186 654.1 377 94.2
GWHGAZTO012447 Oryza alta HOM05M006269 ORTHO05M007532 1.2e-166 589.3 376 87.2
OB11G23200 Oryza brachyantha HOM05M006269 ORTHO05M007532 7.7e-166 586.6 377 86.2
PH02Gene06402 Phyllostachys edulis HOM05M006269 ORTHO05M007532 2.1e-163 578.6 373 85.3
PH02Gene33521 Phyllostachys edulis HOM05M006269 ORTHO05M007532 5.2e-162 573.9 375 85.3
PH02Gene44794 Phyllostachys edulis HOM05M006269 ORTHO05M007532 8.8e-162 573.2 375 85.3
PH02Gene37418 Phyllostachys edulis HOM05M006269 ORTHO05M007532 8.3e-160 566.6 375 84.5
Zjn_sc00087.1.g00240.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M006269 ORTHO05M007532 3.1e-151 538.1 376 75.8
EJB05_27349 Eragrostis curvula HOM05M006269 ORTHO05M007532 4.1e-151 537.7 386 77.5
Misin10G134400 Miscanthus sinensis HOM05M006269 ORTHO05M007532 3.8e-149 531.2 391 73.9
Horvu_MOREX_2H01G127300 Hordeum vulgare HOM05M006269 ORTHO05M007532 2.8e-147 525.0 434 70.7
Zm00001eb200070 Zea mays B73 HOM05M006269 ORTHO05M007532 9.8e-145 516.5 391 74.2
TRITD2Bv1G039840 Triticum turgidum HOM05M006269 ORTHO05M007532 2.2e-144 515.4 412 72.1
Misin09G158000 Miscanthus sinensis HOM05M006269 ORTHO05M007532 4.9e-144 514.2 391 72.6
AET2Gv20223400 Aegilops tauschii HOM05M006269 ORTHO05M007532 1.8e-143 512.3 416 70.2
TraesCS2D03G0237700 Triticum aestivum HOM05M006269 ORTHO05M007532 1.8e-143 512.3 416 70.2
Bradi4g16160 Brachypodium distachyon HOM05M006269 ORTHO05M007532 1.2e-142 509.6 410 73.4
EJB05_57914 Eragrostis curvula HOM05M006269 ORTHO05M007532 1.2e-142 509.6 443 67.5
TraesCS2B03G0320200 Triticum aestivum HOM05M006269 ORTHO05M007532 2.7e-142 508.4 434 69.1
TRIDC2BG016460 Triticum dicoccoides HOM05M006269 ORTHO05M007532 6.0e-142 507.3 434 68.9
Pahal.9G594500 Panicum hallii HOM05M006269 ORTHO05M007532 1.0e-141 506.5 378 77.0
Zm00007a00021541 Zea mays B104 HOM05M006269 ORTHO05M007532 2.3e-141 505.4 391 73.4
GWHGASIY006542 Secale cereale HOM05M006269 ORTHO05M007532 2.5e-140 501.9 416 69.7
Sevir.8G167400 Setaria viridis HOM05M006269 ORTHO05M007532 4.7e-139 497.7 398 71.9
Seita.8G156800 Setaria italica HOM05M006269 ORTHO05M007532 3.1e-138 495.0 405 70.6
Sobic.005G157100 Sorghum bicolor HOM05M006269 ORTHO05M007532 8.9e-138 493.4 426 66.2
GWHGASIY006567 Secale cereale HOM05M006269 ORTHO05M007532 1.9e-135 485.7 416 68.3
Sspon.06G0025620-3D Saccharum spontaneum HOM05M006269 ORTHO05M007532 1.1e-132 476.5 393 72.3
TraesCS2A03G0232600 Triticum aestivum HOM05M006269 ORTHO05M007532 2.0e-129 465.7 401 68.8
TRIDC2AG013620 Triticum dicoccoides HOM05M006269 ORTHO05M007532 2.0e-129 465.7 401 68.8
Dexi8B01G0011510 Digitaria exilis HOM05M006269 ORTHO05M007532 7.5e-129 463.8 355 76.1
V3.Lp_chr4_0G15364 Lolium perenne HOM05M006269 ORTHO05M007532 2.9e-128 461.8 410 67.1
Sspon.06G0025620-2C Saccharum spontaneum HOM05M006269 ORTHO05M007532 6.6e-117 424.1 398 65.3
GWHGAORA001395 Cenchrus purpureus HOM05M006269 ORTHO05M007532 1.2e-115 419.9 341 73.0
Asa4G03732 Allium sativum HOM05M006269 ORTHO05M007532 3.0e-109 398.7 355 59.2
Ma01_g05030 Musa acuminata HOM05M006269 ORTHO05M007532 3.3e-108 395.2 376 58.2
p5.00_sc00032_p0098 Elaeis guineensis HOM05M006269 ORTHO05M007532 1.6e-107 392.9 372 58.9
Dexi8A01G0012790 Digitaria exilis HOM05M006269 ORTHO05M007532 1.1e-106 390.2 374 63.6
Potri.001G254600 Populus trichocarpa HOM05M006269 ORTHO05M007532 1.1e-98 363.6 374 52.7
evm.TU.AsparagusV1_07.1571.V1.1 Asparagus officinalis HOM05M006269 ORTHO05M007532 1.4e-98 363.2 392 53.3
CALSI_Maker00039201 Calamus simplicifolius HOM05M006269 ORTHO05M007532 3.1e-98 362.1 349 57.3
Potri.009G049700 Populus trichocarpa HOM05M006269 ORTHO05M007532 6.4e-96 354.4 372 53.0
Glyma.11G015900 Glycine max HOM05M006269 ORTHO05M007532 9.3e-95 350.5 375 53.9
Spipo6G0034900 Spirodela polyrhiza HOM05M006269 ORTHO05M007532 3.0e-93 345.5 364 54.4
MBI13_g04769_MAGBIO Magnolia biondii HOM05M006269 ORTHO05M007532 6.7e-93 344.4 402 49.5
Glyma.01G226800 Glycine max HOM05M006269 ORTHO05M007532 1.9e-92 342.8 392 51.0
Zosma01g37420 Zostera marina HOM05M006269 ORTHO05M007532 9.6e-92 340.5 374 53.2
ATR0721G160 Amborella trichopoda HOM05M006269 ORTHO05M007532 3.7e-91 338.6 360 52.2
CDE08G0181 Ceratophyllum demersum HOM05M006269 ORTHO05M007532 5.3e-90 334.7 370 51.4
Solyc11g065180.2 Solanum lycopersicum HOM05M006269 ORTHO05M007532 1.2e-89 333.6 366 51.1
TRITD2Av1G030720 Triticum turgidum HOM05M006269 ORTHO05M007532 1.6e-86 323.2 333 61.0
Aco006313 Ananas comosus HOM05M006269 ORTHO05M007532 3.0e-85 318.9 324 56.5
AT5G12410 Arabidopsis thaliana HOM05M006269 ORTHO05M007532 1.1e-82 310.5 389 47.0
SEGI_14205 Sequoiadendron giganteum HOM05M006269 ORTHO05M007532 5.3e-74 281.6 358 47.5
DDU096G0011 Dioscorea dumetorum HOM05M006269 ORTHO05M007532 2.6e-60 236.1 278 52.5
DDU524G0040 Dioscorea dumetorum HOM05M006269 ORTHO05M007532 2.6e-60 236.1 278 52.5
PH02Gene51182 Phyllostachys edulis HOM05M006269 ORTHO05M007532 1.5e-52 210.3 117 90.6
SMO013G0006 Selaginella moellendorffii HOM05M006269 ORTHO05M007532 4.4e-52 208.8 361 35.5
Mapoly0091s0083 Marchantia polymorpha HOM05M006269 ORTHO05M007532 4.1e-50 202.2 379 36.4
AagrBONN_evm.TU.Sc2ySwM_228.1610 Anthoceros agrestis HOM05M006269 ORTHO05M007532 7.7e-49 198.0 354 34.2
Pp3c3_2270 Physcomitrium patens HOM05M006269 ORTHO05M007532 7.5e-44 181.4 372 33.3
Sspon.06G0025620-1B Saccharum spontaneum HOM05M000086 ORTHO05M000044 3.7e-43 179.1 319 45.8
HPP92_011577 Vanilla planifolia HOM05M006269 ORTHO05M007532 1.2e-28 131.0 217 44.7
CBR_g300 Chara braunii HOM05M006269 ORTHO05M007532 2.6e-28 129.8 228 31.1
PRCOL_00001563 Prasinoderma coloniale HOM05M006269 ORTHO05M007532 5.4e-26 122.1 181 38.1
Cre14.g629550 Chlamydomonas reinhardtii HOM05M006269 ORTHO05M007532 1.2e-20 104.4 181 34.3
MCO09G159 Micromonas commoda HOM05M006269 ORTHO05M007532 4.4e-20 102.4 181 30.4
OsKitaake11g162400 Oryza sativa Kitaake HOM05M006269 ORTHO05M007532 9.8e-20 101.3 60 80.0
DDU524G0013 Dioscorea dumetorum HOM05M006269 ORTHO05M007532 4.9e-19 99.0 48 91.7
DDU096G0017 Dioscorea dumetorum HOM05M006269 ORTHO05M007532 1.2e-14 84.3 57 71.9


User provided reference genes

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