Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0307400 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 5.9e-61 236.5 113 100.0
OsKitaake01g068600 Oryza sativa Kitaake HOM05M002234 ORTHO05M004498 1.1e-51 205.7 112 89.3
Os01g0196133 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 1.1e-51 205.7 112 89.3
Os08g0172566 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 1.2e-50 202.2 112 81.2
Os02g0260900 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 2.1e-50 201.4 112 81.2
Os04g0247700 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 2.1e-50 201.4 112 81.2
Os07g0152500 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 2.1e-50 201.4 112 81.2
Os08g0504200 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 2.7e-50 201.1 112 81.2
Os08g0283300 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 3.6e-50 200.7 112 80.4
Os08g0283900 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 3.6e-50 200.7 112 80.4
Os08g0284500 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 3.6e-50 200.7 112 80.4
Os01g0308700 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 1.0e-49 199.1 112 80.4
Os05g0377450 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 1.0e-49 199.1 112 80.4
Os06g0198100 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 1.0e-49 199.1 112 80.4
Os08g0283600 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 1.4e-49 198.7 112 79.5
Os08g0284200 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 1.4e-49 198.7 112 79.5
Os07g0220466 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 3.0e-49 197.6 112 80.4
GWHGAZTO011298 Oryza alta HOM05M002234 ORTHO05M004498 9.8e-48 192.6 112 77.7
OsKitaake11g101300 Oryza sativa Kitaake HOM05M002234 ORTHO05M004498 1.7e-47 191.8 113 80.5
Os08g0543275 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 1.7e-47 191.8 113 80.5
Os09g0113500 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 1.7e-47 191.8 113 80.5
Os10g0412350 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 1.7e-47 191.8 113 80.5
Os10g0557133 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 1.7e-47 191.8 113 80.5
Os11g0272675 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 1.7e-47 191.8 113 80.5
Os12g0484375 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 1.7e-47 191.8 113 80.5
Os12g0611500 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 1.7e-47 191.8 113 80.5
OsKitaake06g137050 Oryza sativa Kitaake HOM05M002234 ORTHO05M004498 2.2e-47 191.4 113 80.5
Os06g0323550 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 2.2e-47 191.4 113 80.5
Os07g0486300 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 2.2e-47 191.4 113 80.5
Os08g0283000 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 2.2e-47 191.4 113 79.6
Os05g0391300 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 2.8e-47 191.0 113 79.6
Os10g0332733 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 2.8e-47 191.0 113 79.6
OsR498G0408372500.01 Oryza sativa ssp. indica HOM05M002234 ORTHO05M004498 3.7e-47 190.7 113 80.5
Os04g0375750 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 3.7e-47 190.7 113 80.5
Os12g0598600 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 3.7e-47 190.7 113 78.8
GWHGAZTO017746 Oryza alta HOM05M002234 ORTHO05M004498 6.3e-47 189.9 113 79.6
Os02g0255400 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 8.3e-47 189.5 113 79.6
Os06g0132000 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 8.3e-47 189.5 113 78.8
Os12g0621832 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 8.3e-47 189.5 113 78.8
OsKitaake12g177400 Oryza sativa Kitaake HOM05M002234 ORTHO05M004498 1.4e-46 188.7 113 78.8
Os12g0562166 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 1.4e-46 188.7 113 78.8
GWHGAZTO095151 Oryza alta HOM05M002234 ORTHO05M004498 2.4e-46 188.0 113 77.9
Os08g0437566 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 4.1e-46 187.2 113 77.9
GWHGAZTO059887 Oryza alta HOM05M002234 ORTHO05M004498 1.2e-45 185.7 113 77.9
Os04g0436700 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 1.0e-44 182.6 113 77.0
GWHGAZTO090693 Oryza alta HOM05M002234 ORTHO05M004498 5.0e-44 180.3 113 77.0
GWHGAZTO086240 Oryza alta HOM05M002234 ORTHO05M004498 7.3e-43 176.4 113 76.1
V3.Lp_chr2_0G7216 Lolium perenne HOM05M002234 ORTHO05M008542 1.4e-41 172.2 112 65.2
V3.Lp_chr3_0G11536 Lolium perenne HOM05M002234 ORTHO05M008542 1.4e-41 172.2 112 65.2
V3.Lp_chr3_0G11538 Lolium perenne HOM05M002234 ORTHO05M008542 1.4e-41 172.2 112 65.2
V3.Lp_chr3_0G11540 Lolium perenne HOM05M002234 ORTHO05M008542 1.4e-41 172.2 112 65.2
V3.Lp_chr3_0G11542 Lolium perenne HOM05M002234 ORTHO05M008542 1.4e-41 172.2 112 65.2
V3.Lp_chr4_0G24620 Lolium perenne HOM05M002234 ORTHO05M008542 1.4e-41 172.2 112 65.2
V3.Lp_chr1_0G18296 Lolium perenne HOM05M002234 ORTHO05M008542 1.8e-41 171.8 112 65.2
V3.Lp_chr1_0G7008 Lolium perenne HOM05M002234 ORTHO05M008542 1.8e-41 171.8 112 65.2
V3.Lp_chr3_0G11532 Lolium perenne HOM05M002234 ORTHO05M008542 1.8e-41 171.8 112 65.2
V3.Lp_chr3_0G23998 Lolium perenne HOM05M002234 ORTHO05M008542 1.8e-41 171.8 112 65.2
V3.Lp_chr3_0G24000 Lolium perenne HOM05M002234 ORTHO05M008542 1.8e-41 171.8 112 65.2
V3.Lp_chr5_0G1348 Lolium perenne HOM05M002234 ORTHO05M008542 1.8e-41 171.8 112 65.2
V3.Lp_chr6_0G9462 Lolium perenne HOM05M002234 ORTHO05M008542 1.8e-41 171.8 112 65.2
V3.Lp_chr5_0G17186 Lolium perenne HOM05M002234 ORTHO05M008542 4.0e-41 170.6 112 65.2
V3.Lp_chr4_0G21624 Lolium perenne HOM05M002234 ORTHO05M004498 3.4e-40 167.5 108 65.7
V3.Lp_chr6_0G8126 Lolium perenne HOM05M002234 ORTHO05M008542 9.8e-40 166.0 112 63.4
V3.Lp_chr6_0G9430 Lolium perenne HOM05M002234 ORTHO05M004498 9.8e-40 166.0 108 65.7
Seita.1G196300 Setaria italica HOM05M002234 ORTHO05M004498 6.4e-39 163.3 112 64.3
V3.Lp_chr4_0G638 Lolium perenne HOM05M002234 ORTHO05M008542 1.8e-38 161.8 112 64.3
Sevir.2G157500 Setaria viridis HOM05M002234 ORTHO05M004498 1.8e-38 161.8 112 63.4
Sevir.3G343700 Setaria viridis HOM05M002234 ORTHO05M004498 1.8e-38 161.8 112 63.4
Sevir.8G088200 Setaria viridis HOM05M002234 ORTHO05M004498 1.8e-38 161.8 112 63.4
Sevir.1G128800 Setaria viridis HOM05M002234 ORTHO05M004498 4.1e-38 160.6 112 63.4
V3.Lp_chr6_0G9432 Lolium perenne HOM05M002234 ORTHO05M004498 2.0e-37 158.3 115 61.7
Sevir.3G312200 Setaria viridis HOM05M002234 ORTHO05M004498 3.6e-34 147.5 108 60.2
Sevir.1G150200 Setaria viridis HOM05M002234 ORTHO05M004498 1.7e-31 138.7 104 61.5
V3.Lp_chr3_0G11534 Lolium perenne HOM05M002234 ORTHO05M008542 1.4e-30 135.6 112 53.6
V3.Lp_chr6_0G2032 Lolium perenne HOM05M002234 ORTHO05M008542 1.9e-30 135.2 83 71.1
TRITD5Bv1G187920 Triticum turgidum HOM05M002234 ORTHO05M004498 3.0e-28 127.9 112 49.1
TRITD2Bv1G225070 Triticum turgidum HOM05M002234 ORTHO05M004498 3.9e-28 127.5 112 49.1
TRITD2Bv1G262160 Triticum turgidum HOM05M002234 ORTHO05M004498 3.9e-28 127.5 112 49.1
TRITD4Bv1G043230 Triticum turgidum HOM05M002234 ORTHO05M004498 3.9e-28 127.5 112 49.1
TRITD2Bv1G262120 Triticum turgidum HOM05M002234 ORTHO05M004498 5.0e-28 127.1 112 49.1
TRITD5Av1G011110 Triticum turgidum HOM05M002234 ORTHO05M004498 5.0e-28 127.1 112 49.1
Os07g0257800 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 8.6e-28 126.3 60 90.0
TRITD2Bv1G262150 Triticum turgidum HOM05M002234 ORTHO05M004498 1.5e-27 125.6 112 48.2
TRITD1Av1G191050 Triticum turgidum HOM05M002234 ORTHO05M004498 2.5e-27 124.8 112 50.0
TRITD5Av1G011040 Triticum turgidum HOM05M002234 ORTHO05M004498 3.3e-27 124.4 112 48.2
Os01g0740150 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 1.8e-25 118.6 73 75.3
TRITD1Bv1G155190 Triticum turgidum HOM05M002234 ORTHO05M004498 5.2e-25 117.1 112 46.4
Pahal.9G637400 Panicum hallii HOM05M002234 ORTHO05M004498 1.5e-19 99.0 112 46.4
V3.Lp_chr4_0G1062 Lolium perenne HOM05M002234 ORTHO05M008542 2.5e-19 98.2 52 78.8
GWHGAZTO030028 Oryza alta HOM05M002234 ORTHO05M004498 8.4e-15 83.2 64 65.6
OsR498G0815292800.01 Oryza sativa ssp. indica HOM05M002234 ORTHO05M004498 2.4e-14 81.6 49 73.5
Os01g0114000 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 2.4e-14 81.6 49 73.5
AET0Gv20009000 Aegilops tauschii HOM05M002234 ORTHO05M008542 4.1e-14 80.9 60 55.0
Sevir.9G279200 Setaria viridis HOM05M002234 ORTHO05M004498 6.0e-13 77.0 112 34.8
GWHGAZTO090692 Oryza alta HOM05M002234 ORTHO05M004498 1.3e-12 75.9 50 74.0
V3.Lp_chr1_0G18292 Lolium perenne HOM05M002234 ORTHO05M008542 1.7e-12 75.5 112 33.9
Os12g0190875 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 5.1e-12 73.9 50 72.0
Os03g0199800 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 8.6e-12 73.2 51 70.6
OsR498G0917819000.01 Oryza sativa ssp. indica HOM05M002234 ORTHO05M004498 1.1e-11 72.8 50 72.0
OsR498G1018010900.01 Oryza sativa ssp. indica HOM05M002234 ORTHO05M004498 1.1e-11 72.8 50 72.0
OsR498G0916776400.01 Oryza sativa ssp. indica HOM05M002234 ORTHO05M004498 1.5e-11 72.4 50 70.0
OsR498G1222041000.01 Oryza sativa ssp. indica HOM05M002234 ORTHO05M004498 1.5e-11 72.4 50 70.0
Os08g0421600 Oryza sativa ssp. japonica HOM05M002234 ORTHO05M004498 1.5e-11 72.4 50 70.0
OsR498G1222041300.01 Oryza sativa ssp. indica HOM05M002234 ORTHO05M004498 1.9e-11 72.0 50 72.0
OsR498G0611573700.01 Oryza sativa ssp. indica HOM05M002234 ORTHO05M004498 3.3e-11 71.2 50 70.0
OsR498G1018005700.01 Oryza sativa ssp. indica HOM05M002234 ORTHO05M004498 4.3e-11 70.9 50 70.0
GWHGAZTO051843 Oryza alta HOM05M002234 ORTHO05M004498 5.6e-11 70.5 50 70.0
OsR498G0204880900.01 Oryza sativa ssp. indica HOM05M002234 ORTHO05M004498 4.7e-10 67.4 50 68.0
OsR498G0408611700.01 Oryza sativa ssp. indica HOM05M002234 ORTHO05M004498 4.7e-10 67.4 50 68.0
GWHGAZTO011058 Oryza alta HOM05M002234 ORTHO05M004498 1.4e-09 65.9 50 68.0
Sevir.8G240332 Setaria viridis HOM05M002234 ORTHO05M004498 8.9e-09 63.2 49 53.1
Sevir.8G240400 Setaria viridis HOM05M002234 ORTHO05M004498 8.9e-09 63.2 49 53.1
GWHGAZTO045520 Oryza alta HOM05M002234 ORTHO05M004498 5.8e-08 60.5 50 60.0
TraesCS7B03G0221600 Triticum aestivum HOM05M002234 ORTHO05M004498 9.3e-06 53.1 102 29.4
TRITD7Bv1G033480 Triticum turgidum HOM05M002234 ORTHO05M004498 9.3e-06 53.1 102 29.4

Aegilops tauschii (1 genes)
Allium sativum (0 genes)
Amborella trichopoda (0 genes)
Ananas comosus (0 genes)
Anthoceros agrestis (0 genes)
Arabidopsis thaliana (0 genes)
Asparagus officinalis (0 genes)
Brachypodium distachyon (0 genes)
Calamus simplicifolius (0 genes)
Cenchrus purpureus (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (0 genes)
Dioscorea dumetorum (0 genes)
Elaeis guineensis (0 genes)
Eragrostis curvula (0 genes)
Glycine max (0 genes)
Hordeum vulgare (0 genes)
Lolium perenne (23 genes)
Magnolia biondii (0 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (0 genes)
Musa acuminata (0 genes)
Oropetium thomaeum (0 genes)
Oryza alta (11 genes)
Oryza brachyantha (0 genes)
Oryza sativa Kitaake (4 genes)
Oryza sativa ssp. indica (11 genes)
Oryza sativa ssp. japonica (42 genes)
Panicum hallii (1 genes)
Phyllostachys edulis (0 genes)
Physcomitrium patens (0 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (0 genes)
Secale cereale (0 genes)
Selaginella moellendorffii (0 genes)
Sequoiadendron giganteum (0 genes)
Setaria italica (1 genes)
Setaria viridis (9 genes)
Solanum lycopersicum (0 genes)
Sorghum bicolor (0 genes)
Spirodela polyrhiza (0 genes)
Triticum aestivum (1 genes)
Triticum dicoccoides (0 genes)
Triticum turgidum (11 genes)
Vanilla planifolia (0 genes)
Zea mays B73 (0 genes)
Zea mays B104 (0 genes)
Zostera marina (0 genes)
Zoysia japonica ssp. nagirizaki (0 genes)

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