Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
OsKitaake11g103100 Oryza sativa Kitaake HOM05M008970 ORTHO05M014977 3.0e-131 471.1 236 100.0
Os11g0275800 Oryza sativa ssp. japonica HOM05M008970 ORTHO05M014977 3.0e-131 471.1 236 100.0
OsR498G1119811400.01 Oryza sativa ssp. indica HOM05M008970 ORTHO05M014977 1.2e-129 465.7 234 99.1
PH02Gene24486 Phyllostachys edulis HOM05M008970 ORTHO05M014977 3.9e-83 311.2 227 69.6
GWHGAZTO011265 Oryza alta HOM05M008970 ORTHO05M014977 8.3e-57 223.8 237 53.6
TRITD1Av1G003210 Triticum turgidum HOM05M008970 ORTHO05M014977 2.4e-56 222.2 237 52.7
TraesCS1A03G0031900 Triticum aestivum HOM05M008970 ORTHO05M014977 9.1e-56 220.3 237 52.7
OsKitaake11g100500 Oryza sativa Kitaake HOM05M008970 ORTHO05M014977 1.5e-50 203.0 244 50.4
OB11G17460 Oryza brachyantha HOM05M008970 ORTHO05M014977 3.4e-50 201.8 234 50.9
TRIDC1AG001250 Triticum dicoccoides HOM05M008970 ORTHO05M014977 2.7e-39 165.6 168 53.6
GWHGAZTO011264 Oryza alta HOM05M008970 ORTHO05M011800 3.9e-30 135.2 245 40.0
PH02Gene09061 Phyllostachys edulis HOM05M008970 ORTHO05M011800 8.6e-30 134.0 228 39.5
PH02Gene09064 Phyllostachys edulis HOM05M008970 ORTHO05M011800 1.2e-28 130.2 235 38.7
PH02Gene09062 Phyllostachys edulis HOM05M000104 ORTHO05M011800 4.7e-28 128.3 230 38.7
OsKitaake11g100400 Oryza sativa Kitaake HOM05M008970 ORTHO05M011800 6.2e-28 127.9 249 37.8
Os11g0270000 Oryza sativa ssp. japonica HOM05M008970 ORTHO05M011800 6.2e-28 127.9 249 37.8
TRITD1Av1G003230 Triticum turgidum HOM05M008970 ORTHO05M011800 5.2e-27 124.8 235 38.3
TraesCS1A03G0032000 Triticum aestivum HOM05M008970 ORTHO05M011800 6.8e-27 124.4 235 37.9
OsR498G1119787000.01 Oryza sativa ssp. indica HOM05M008970 ORTHO05M011800 4.4e-26 121.7 249 36.9
OsKitaake11g100300 Oryza sativa Kitaake HOM05M008970 ORTHO05M011800 1.3e-25 120.2 231 38.1
Os11g0269900 Oryza sativa ssp. japonica HOM05M008970 ORTHO05M011800 1.3e-25 120.2 231 38.1
OsR498G1119786800.01 Oryza sativa ssp. indica HOM05M008970 ORTHO05M011800 2.2e-25 119.4 231 38.1
GWHGAZTO011263 Oryza alta HOM05M008970 ORTHO05M011800 1.1e-24 117.1 181 43.6
TraesCS1D03G0023500 Triticum aestivum HOM05M008970 ORTHO05M011800 5.4e-24 114.8 223 35.9
OsKitaake11g102200 Oryza sativa Kitaake HOM05M000104 ORTHO05M011800 1.6e-23 113.2 235 35.7
Os11g0274700 Oryza sativa ssp. japonica HOM05M000104 ORTHO05M011800 1.6e-23 113.2 235 35.7
OsR498G1119799200.01 Oryza sativa ssp. indica HOM05M008970 ORTHO05M011800 2.7e-23 112.5 235 35.7
TraesCS1A03G0032100 Triticum aestivum HOM05M008970 ORTHO05M011800 1.3e-22 110.2 222 34.7
GWHGASIY000186 Secale cereale HOM05M008970 ORTHO05M011800 1.2e-18 97.1 168 39.3
EJB05_36711 Eragrostis curvula HOM05M001832 ORTHO05M001858 1.2e-15 87.0 230 28.7
p5.00_sc20941_p0001 Elaeis guineensis HOM05M001832 ORTHO05M001858 1.6e-15 86.7 228 30.7
Bradi4g25850 Brachypodium distachyon HOM05M008970 ORTHO05M011800 2.1e-15 86.3 189 34.4
Zjn_sc00027.1.g03950.1.sm.mk Zoysia japonica ssp. nagirizaki HOM05M001832 ORTHO05M001858 1.7e-14 83.2 230 27.0
AET1Gv20834500 Aegilops tauschii HOM05M001832 ORTHO05M001858 2.3e-14 82.8 231 27.3
GWHGASIY004804 Secale cereale HOM05M001832 ORTHO05M001858 2.3e-14 82.8 237 28.3
TraesCS1D03G0826600 Triticum aestivum HOM05M001832 ORTHO05M001858 2.3e-14 82.8 231 27.3
MBI06_g15768_MAGBIO Magnolia biondii HOM05M001832 ORTHO05M001858 6.6e-14 81.3 236 30.1
GWHGAORA038625 Cenchrus purpureus HOM05M001832 ORTHO05M001858 1.1e-13 80.5 233 28.3
Horvu_MOREX_1H01G528600 Hordeum vulgare HOM05M001832 ORTHO05M001858 1.1e-13 80.5 237 27.8
GWHGAZTO084776 Oryza alta HOM05M001832 ORTHO05M001858 1.1e-13 80.5 233 27.5
TraesCS1A03G0855800 Triticum aestivum HOM05M001832 ORTHO05M001858 1.1e-13 80.5 231 29.4
Aco004313 Ananas comosus HOM05M001832 ORTHO05M001858 1.9e-13 79.7 240 28.8
Aco004311 Ananas comosus HOM05M001832 ORTHO05M001858 2.5e-13 79.3 241 28.2
OsKitaake05g235600 Oryza sativa Kitaake HOM05M001832 ORTHO05M001858 2.5e-13 79.3 236 28.4
Os05g0529200 Oryza sativa ssp. japonica HOM05M001832 ORTHO05M001858 2.5e-13 79.3 236 28.4
TraesCS1B03G0990500 Triticum aestivum HOM05M001832 ORTHO05M001858 4.3e-13 78.6 236 28.0
TRITD1Av1G200580 Triticum turgidum HOM05M001832 ORTHO05M001858 5.6e-13 78.2 236 28.4
CALSI_Maker00043950 Calamus simplicifolius HOM05M001832 ORTHO05M001858 9.6e-13 77.4 223 29.6
CALSI_Maker00006172 Calamus simplicifolius HOM05M001832 ORTHO05M001858 1.3e-12 77.0 223 29.6
AET1Gv20834200 Aegilops tauschii HOM05M001832 ORTHO05M001858 2.8e-12 75.9 237 27.0
TraesCS1D03G0826400 Triticum aestivum HOM05M001832 ORTHO05M001858 2.8e-12 75.9 237 27.0
TRIDC1AG001260 Triticum dicoccoides HOM05M008970 ORTHO05M011800 4.8e-12 75.1 108 44.4
Zm00007a00022737 Zea mays B104 HOM05M001832 ORTHO05M001858 6.2e-12 74.7 242 26.9
Bradi2g19050 Brachypodium distachyon HOM05M001832 ORTHO05M001858 8.1e-12 74.3 228 27.6
GWHGAORA003666 Cenchrus purpureus HOM05M001832 ORTHO05M001858 8.1e-12 74.3 235 28.1
Aco005581 Ananas comosus HOM05M001832 ORTHO05M001858 1.4e-11 73.6 243 27.2
Zm00001eb293360 Zea mays B73 HOM05M001832 ORTHO05M001858 1.8e-11 73.2 235 27.2
Misin17G210200 Miscanthus sinensis HOM05M001832 ORTHO05M001858 2.4e-11 72.8 236 27.1
TraesCS3D03G0289000 Triticum aestivum HOM05M001832 ORTHO05M001858 2.4e-11 72.8 230 30.0
CALSI_Maker00003696 Calamus simplicifolius HOM05M001832 ORTHO05M001858 3.1e-11 72.4 223 28.7
GWHGASIY004803 Secale cereale HOM05M001832 ORTHO05M001858 3.1e-11 72.4 231 26.8
Misin16G203600 Miscanthus sinensis HOM05M001832 ORTHO05M001858 4.0e-11 72.0 236 27.1
Ma10_g06630 Musa acuminata HOM05M001832 ORTHO05M001858 5.3e-11 71.6 231 27.3
Potri.008G164900 Populus trichocarpa HOM05M001832 ORTHO05M001858 5.3e-11 71.6 226 30.1
Ot_Chr5_g03634 Oropetium thomaeum HOM05M001832 ORTHO05M001858 9.0e-11 70.9 230 26.5
Seita.3G170100 Setaria italica HOM05M001832 ORTHO05M001858 9.0e-11 70.9 235 26.8
Sevir.3G174300 Setaria viridis HOM05M001832 ORTHO05M001858 9.0e-11 70.9 235 26.8
TraesCS3B03G0368700 Triticum aestivum HOM05M001832 ORTHO05M001858 9.0e-11 70.9 230 30.4
TRIDC3BG021880 Triticum dicoccoides HOM05M001832 ORTHO05M001858 9.0e-11 70.9 230 30.4
Potri.010G073700 Populus trichocarpa HOM05M001832 ORTHO05M001858 2.0e-10 69.7 226 30.1
GWHGASIY014238 Secale cereale HOM05M001832 ORTHO05M001858 2.0e-10 69.7 232 28.9
DDU227G0014 Dioscorea dumetorum HOM05M001832 ORTHO05M001858 2.6e-10 69.3 236 28.0
DDU314G0260 Dioscorea dumetorum HOM05M001832 ORTHO05M001858 3.4e-10 68.9 236 28.0
EJB05_36712 Eragrostis curvula HOM05M001832 ORTHO05M001858 3.4e-10 68.9 230 26.5
Sobic.009G207100 Sorghum bicolor HOM05M001832 ORTHO05M001858 3.4e-10 68.9 235 26.4
Horvu_MOREX_3H01G166400 Hordeum vulgare HOM05M001832 ORTHO05M001858 4.4e-10 68.6 187 31.0
Potri.010G207800 Populus trichocarpa HOM05M001832 ORTHO05M001858 4.4e-10 68.6 216 27.8
Spipo18G0019700 Spirodela polyrhiza HOM05M001832 ORTHO05M001858 4.4e-10 68.6 237 27.4
EJB05_32515 Eragrostis curvula HOM05M001832 ORTHO05M001858 7.6e-10 67.8 237 28.7
Seita.5G145200 Setaria italica HOM05M001832 ORTHO05M001858 7.6e-10 67.8 238 26.1
Zosma03g25200 Zostera marina HOM05M001832 ORTHO05M001858 9.9e-10 67.4 227 25.1
CALSI_Maker00019686 Calamus simplicifolius HOM05M001832 ORTHO05M001858 1.3e-09 67.0 236 27.1
TRIDC3AG017710 Triticum dicoccoides HOM05M001832 ORTHO05M001858 1.3e-09 67.0 230 29.1
CALSI_Maker00019687 Calamus simplicifolius HOM05M001832 ORTHO05M001858 1.7e-09 66.6 236 27.1
Misin05G027800 Miscanthus sinensis HOM05M001832 ORTHO05M001858 1.7e-09 66.6 236 27.5
Sevir.5G143700 Setaria viridis HOM05M001832 ORTHO05M001858 2.2e-09 66.2 238 26.1
Sspon.03G0036940-1B Saccharum spontaneum HOM05M001832 ORTHO05M001858 2.9e-09 65.9 236 27.1
OsKitaake01g075000 Oryza sativa Kitaake HOM05M001832 ORTHO05M001858 3.8e-09 65.5 232 27.2
Os01g0205600 Oryza sativa ssp. japonica HOM05M001832 ORTHO05M001858 3.8e-09 65.5 232 27.2
TraesCS3A03G0312700 Triticum aestivum HOM05M001832 ORTHO05M001858 3.8e-09 65.5 178 33.7
TRITD3Av1G051860 Triticum turgidum HOM05M001832 ORTHO05M001858 3.8e-09 65.5 178 33.7
OB11G17470 Oryza brachyantha HOM05M008970 ORTHO05M011800 4.9e-09 65.1 139 33.1
Sspon.03G0036940-2C Saccharum spontaneum HOM05M001832 ORTHO05M001858 8.4e-09 64.3 236 26.3
Glyma.18G288900 Glycine max HOM05M001832 ORTHO05M001858 2.4e-08 62.8 219 28.8
Sspon.03G0036930-1B Saccharum spontaneum HOM05M001832 ORTHO05M001858 3.2e-08 62.4 222 27.0
TraesCS3D03G0289200 Triticum aestivum HOM05M001832 ORTHO05M001858 3.2e-08 62.4 230 27.4
AT1G65520 Arabidopsis thaliana HOM05M001832 ORTHO05M001858 4.2e-08 62.0 227 25.6
Glyma.10G007900 Glycine max HOM05M001832 ORTHO05M001858 5.4e-08 61.6 225 28.0
Sobic.003G024900 Sorghum bicolor HOM05M001832 ORTHO05M001858 5.4e-08 61.6 224 26.8
Misin05G027700 Miscanthus sinensis HOM05M001832 ORTHO05M001858 9.3e-08 60.8 221 26.7
GWHGASIY014289 Secale cereale HOM05M001832 ORTHO05M001858 9.3e-08 60.8 171 30.4
TRITD3Bv1G056500 Triticum turgidum HOM05M001832 ORTHO05M001858 9.3e-08 60.8 230 27.0
Zm00001eb338180 Zea mays B73 HOM05M001832 ORTHO05M001858 9.3e-08 60.8 223 27.4
Bradi2g06480 Brachypodium distachyon HOM05M001832 ORTHO05M001858 1.6e-07 60.1 240 27.1
TraesCS3B03G0369100 Triticum aestivum HOM05M001832 ORTHO05M001858 1.6e-07 60.1 230 26.5
TRIDC1BG058680 Triticum dicoccoides HOM05M001832 ORTHO05M001858 1.6e-07 60.1 174 27.0
TRIDC3BG021900 Triticum dicoccoides HOM05M001832 ORTHO05M001858 1.6e-07 60.1 230 26.5
Dexi5A01G0002510 Digitaria exilis HOM05M001832 ORTHO05M001858 2.1e-07 59.7 233 24.5
Zm00007a00014111 Zea mays B104 HOM05M001832 ORTHO05M001858 2.1e-07 59.7 240 26.2
GWHGAZTO040709 Oryza alta HOM05M001832 ORTHO05M001858 2.7e-07 59.3 227 27.3
Sobic.003G025000 Sorghum bicolor HOM05M001832 ORTHO05M001858 3.5e-07 58.9 231 26.8
TraesCS3A03G0312500 Triticum aestivum HOM05M001832 ORTHO05M001858 3.5e-07 58.9 240 27.9
TRIDC3AG017700 Triticum dicoccoides HOM05M001832 ORTHO05M001858 3.5e-07 58.9 240 27.9
TRITD3Av1G051830 Triticum turgidum HOM05M001832 ORTHO05M001858 3.5e-07 58.9 240 27.9
Dexi5B01G0002570 Digitaria exilis HOM05M001832 ORTHO05M001858 6.0e-07 58.2 222 24.3
Zm00001eb120380 Zea mays B73 HOM05M001832 ORTHO05M001858 6.0e-07 58.2 235 27.2
Zm00007a00023293 Zea mays B104 HOM05M001832 ORTHO05M001858 6.0e-07 58.2 235 27.2
Sspon.03G0036950-1B Saccharum spontaneum HOM05M001832 ORTHO05M001858 7.8e-07 57.8 239 26.4
GWHGAZTO035842 Oryza alta HOM05M001832 ORTHO05M001858 1.0e-06 57.4 161 27.3
Sspon.03G0036950-2C Saccharum spontaneum HOM05M001832 ORTHO05M001858 1.3e-06 57.0 238 26.5
Pahal.5G515200 Panicum hallii HOM05M001832 ORTHO05M001858 1.7e-06 56.6 232 25.9
Misin06G014300 Miscanthus sinensis HOM05M001832 ORTHO05M001858 2.3e-06 56.2 220 25.9
Misin05G028000 Miscanthus sinensis HOM05M001832 ORTHO05M001858 3.0e-06 55.8 232 27.2
EJB05_32517 Eragrostis curvula HOM05M001832 ORTHO05M001858 3.9e-06 55.5 227 26.4
EJB05_32531 Eragrostis curvula HOM05M001832 ORTHO05M001858 3.9e-06 55.5 227 26.4
GWHGAORA034040 Cenchrus purpureus HOM05M001832 ORTHO05M001858 5.1e-06 55.1 238 24.4

Aegilops tauschii (2 genes)
Allium sativum (0 genes)
Amborella trichopoda (0 genes)
Ananas comosus (3 genes)
Anthoceros agrestis (0 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (0 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (5 genes)
Cenchrus purpureus (3 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (2 genes)
Dioscorea dumetorum (2 genes)
Elaeis guineensis (1 genes)
Eragrostis curvula (5 genes)
Glycine max (2 genes)
Hordeum vulgare (2 genes)
Lolium perenne (0 genes)
Magnolia biondii (1 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (6 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (1 genes)
Oryza alta (6 genes)
Oryza brachyantha (2 genes)
Oryza sativa Kitaake (7 genes)
Oryza sativa ssp. indica (4 genes)
Oryza sativa ssp. japonica (6 genes)
Panicum hallii (1 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (0 genes)
Populus trichocarpa (3 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (5 genes)
Secale cereale (5 genes)
Selaginella moellendorffii (0 genes)
Sequoiadendron giganteum (0 genes)
Setaria italica (2 genes)
Setaria viridis (2 genes)
Solanum lycopersicum (0 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (14 genes)
Triticum dicoccoides (7 genes)
Triticum turgidum (6 genes)
Vanilla planifolia (0 genes)
Zea mays B73 (3 genes)
Zea mays B104 (3 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

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