Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0195800 Oryza sativa ssp. japonica HOM05M004367 ORTHO05M003631 5.0e-144 513.8 293 100.0
OsKitaake11g062500 Oryza sativa Kitaake HOM05M004367 ORTHO05M003631 2.7e-142 508.1 293 98.6
GWHGAZTO062938 Oryza alta HOM05M004367 ORTHO05M003631 4.1e-114 414.5 300 82.3
GWHGAZTO010824 Oryza alta HOM05M004367 ORTHO05M003631 2.1e-110 402.1 297 79.8
PH02Gene20729 Phyllostachys edulis HOM05M004367 ORTHO05M003631 4.7e-78 294.7 302 63.9
Sevir.8G066900 Setaria viridis HOM05M004367 ORTHO05M003631 4.7e-70 268.1 302 58.6
AET4Gv20210700 Aegilops tauschii HOM05M004367 ORTHO05M003631 3.8e-67 258.5 298 58.7
TraesCS4D03G0192600 Triticum aestivum HOM05M004367 ORTHO05M003631 3.8e-67 258.5 298 58.7
Sspon.05G0017570-1A Saccharum spontaneum HOM05M004367 ORTHO05M003631 6.4e-67 257.7 305 55.7
GWHGASIY019099 Secale cereale HOM05M004367 ORTHO05M003631 1.4e-66 256.5 298 58.7
GWHGASIY019105 Secale cereale HOM05M004367 ORTHO05M003631 1.4e-66 256.5 298 58.7
TraesCS4A03G0571700 Triticum aestivum HOM05M004367 ORTHO05M003631 1.9e-66 256.1 295 58.0
TRIDC4AG034160 Triticum dicoccoides HOM05M004367 ORTHO05M003631 1.9e-66 256.1 295 58.0
TRITD4Av1G169790 Triticum turgidum HOM05M004367 ORTHO05M003631 1.9e-66 256.1 295 58.0
V3.Lp_chr4_0G11428 Lolium perenne HOM05M004367 ORTHO05M003631 4.2e-66 255.0 283 59.0
Pahal.8G057800 Panicum hallii HOM05M004367 ORTHO05M003631 4.2e-66 255.0 306 58.5
GWHGAORA042625 Cenchrus purpureus HOM05M004367 ORTHO05M003631 6.6e-64 247.7 292 56.8
TraesCS4B03G0230100 Triticum aestivum HOM05M004367 ORTHO05M003631 2.5e-63 245.7 295 56.9
TRITD4Bv1G037210 Triticum turgidum HOM05M004367 ORTHO05M003631 2.5e-63 245.7 295 56.9
OB11G14590 Oryza brachyantha HOM05M004367 ORTHO05M003631 3.3e-63 245.4 216 74.5
Sspon.05G0017570-2B Saccharum spontaneum HOM05M004367 ORTHO05M003631 2.1e-62 242.7 305 54.1
Sobic.005G072700 Sorghum bicolor HOM05M004367 ORTHO05M003631 2.8e-62 242.3 319 53.6
GWHGAORA011050 Cenchrus purpureus HOM05M004367 ORTHO05M003631 1.4e-61 240.0 303 57.4
Seita.8G065500 Setaria italica HOM05M004367 ORTHO05M003631 9.9e-60 233.8 293 57.7
Zm00007a00022846 Zea mays B104 HOM05M004367 ORTHO05M003631 1.7e-59 233.0 302 53.6
Dexi8B01G0005300 Digitaria exilis HOM05M004367 ORTHO05M003631 4.9e-59 231.5 302 52.6
Horvu_MOREX_4H01G116700 Hordeum vulgare HOM05M004367 ORTHO05M003631 4.2e-58 228.4 297 52.9
Sspon.05G0035220-2D Saccharum spontaneum HOM05M004367 ORTHO05M003631 1.6e-57 226.5 275 56.0
Dexi8A01G0006180 Digitaria exilis HOM05M004367 ORTHO05M003631 3.9e-56 221.9 286 53.5
Zm00001eb202050 Zea mays B73 HOM05M004367 ORTHO05M003631 9.6e-55 217.2 301 50.5
Zjn_sc00031.1.g03050.1.am.mk Zoysia japonica ssp. nagirizaki HOM05M004367 ORTHO05M005942 5.3e-53 211.5 305 50.5
Bradi4g23340 Brachypodium distachyon HOM05M004367 ORTHO05M003631 3.4e-52 208.8 300 52.3
PH02Gene18830 Phyllostachys edulis HOM05M004367 ORTHO05M003631 2.4e-50 202.6 198 63.6
Sspon.07G0019690-3D Saccharum spontaneum HOM05M000633 ORTHO05M001958 9.1e-29 131.0 347 41.5
Sspon.07G0019690-1A Saccharum spontaneum HOM05M004367 ORTHO05M003631 4.5e-28 128.6 347 41.2
Sspon.07G0019690-1T Saccharum spontaneum HOM05M004367 ORTHO05M003631 4.5e-28 128.6 347 41.2
Sspon.07G0019690-2C Saccharum spontaneum HOM05M004367 ORTHO05M003631 7.7e-28 127.9 347 40.9
Sobic.008G059800 Sorghum bicolor HOM05M004367 ORTHO05M003631 1.3e-27 127.1 333 39.6
evm.TU.AsparagusV1_09.240.V1.1 Asparagus officinalis HOM05M004367 ORTHO05M003631 2.9e-27 125.9 275 39.3
GWHGAORA040388 Cenchrus purpureus HOM05M004367 ORTHO05M003631 8.5e-27 124.4 316 42.4
Dexi3A01G0004810 Digitaria exilis HOM05M004367 ORTHO05M003631 1.9e-26 123.2 332 37.3
EJB05_02659 Eragrostis curvula HOM05M004367 ORTHO05M003631 2.5e-26 122.9 325 36.3
Zm00001eb112640 Zea mays B73 HOM05M004367 ORTHO05M003631 1.2e-25 120.6 228 45.6
p5.00_sc00045_p0107 Elaeis guineensis HOM05M004367 ORTHO05M003631 1.6e-25 120.2 275 37.5
GWHGAZTO014393 Oryza alta HOM05M004367 ORTHO05M003631 1.6e-25 120.2 331 36.6
HPP92_005665 Vanilla planifolia HOM05M004367 ORTHO05M003631 1.6e-25 120.2 280 35.0
EJB05_02544 Eragrostis curvula HOM05M004367 ORTHO05M003631 2.1e-25 119.8 334 35.0
EJB05_28819 Eragrostis curvula HOM05M005510 ORTHO05M005942 2.1e-25 119.8 301 37.2
Pahal.3G049600 Panicum hallii HOM05M004367 ORTHO05M003631 2.7e-25 119.4 337 36.2
Seita.7G281800 Setaria italica HOM05M004367 ORTHO05M003631 3.6e-25 119.0 343 37.3
Sevir.7G292700 Setaria viridis HOM05M004367 ORTHO05M003631 3.6e-25 119.0 343 37.3
OsKitaake12g058100 Oryza sativa Kitaake HOM05M004367 ORTHO05M003631 4.7e-25 118.6 332 37.3
GWHGAZTO065860 Oryza alta HOM05M004367 ORTHO05M003631 6.1e-25 118.2 325 35.7
Seita.J027600 Setaria italica HOM05M004367 ORTHO05M003631 1.4e-24 117.1 343 37.3
Dexi3B01G0004880 Digitaria exilis HOM05M004367 ORTHO05M003631 5.1e-24 115.2 350 35.7
CALSI_Maker00012877 Calamus simplicifolius HOM05M004367 ORTHO05M003631 3.3e-23 112.5 276 39.9
Ot_Chr2_g10796 Oropetium thomaeum HOM05M004367 ORTHO05M003631 1.7e-22 110.2 341 36.7
p5.00_sc00571_p0003 Elaeis guineensis HOM05M004367 ORTHO05M003631 6.3e-22 108.2 280 38.2
p5.00_sc00571_p0004 Elaeis guineensis HOM05M004367 ORTHO05M003631 6.3e-22 108.2 280 38.2
Ma09_g08200 Musa acuminata HOM05M004367 ORTHO05M003631 8.2e-22 107.8 267 34.5
DDU739G0026 Dioscorea dumetorum HOM05M004367 ORTHO05M003631 1.1e-21 107.5 279 33.0
TraesCS5D03G0318500 Triticum aestivum HOM05M004367 ORTHO05M003631 1.8e-21 106.7 320 33.8
TRITD5Av1G084360 Triticum turgidum HOM05M000633 ORTHO05M001958 3.1e-21 105.9 303 33.7
Os12g0182100 Oryza sativa ssp. japonica HOM05M004367 ORTHO05M003631 1.5e-20 103.6 261 38.7
TraesCS5B03G0315700 Triticum aestivum HOM05M004367 ORTHO05M003631 1.5e-20 103.6 303 34.3
TraesCS5A03G0327300 Triticum aestivum HOM05M004367 ORTHO05M003631 2.0e-20 103.2 320 32.8
CALSI_Maker00038025 Calamus simplicifolius HOM05M004367 ORTHO05M003631 5.9e-20 101.7 264 39.4
Asa6G01370 Allium sativum HOM05M004367 ORTHO05M003631 1.0e-19 100.9 275 32.4
Bradi4g41007 Brachypodium distachyon HOM05M004367 ORTHO05M003631 1.3e-19 100.5 317 33.4
GWHGASIY025094 Secale cereale HOM05M004367 ORTHO05M003631 1.3e-19 100.5 318 32.4
Aco003295 Ananas comosus HOM05M004367 ORTHO05M003631 1.7e-19 100.1 209 39.7
Ma10_g11020 Musa acuminata HOM05M004367 ORTHO05M003631 2.9e-19 99.4 275 35.3
Horvu_MOREX_5H01G210400 Hordeum vulgare HOM05M004367 ORTHO05M003631 8.5e-19 97.8 326 32.5
V3.Lp_chr5_0G6796 Lolium perenne HOM05M004367 ORTHO05M003631 4.2e-18 95.5 318 32.4
Ma02_g22620 Musa acuminata HOM05M004367 ORTHO05M003631 1.2e-17 94.0 272 38.2
Potri.003G009400 Populus trichocarpa HOM05M004367 ORTHO05M003631 2.7e-17 92.8 266 32.7
Seita.7G282300 Setaria italica HOM05M004367 ORTHO05M003631 2.7e-17 92.8 221 40.3
CALSI_Maker00050452 Calamus simplicifolius HOM05M004367 ORTHO05M003631 1.8e-16 90.1 242 32.6
Solyc01g103700.3 Solanum lycopersicum HOM05M004367 ORTHO05M003631 1.8e-16 90.1 265 29.1
Potri.004G222800 Populus trichocarpa HOM05M004367 ORTHO05M003631 2.3e-16 89.7 266 31.6
Ma05_g18430 Musa acuminata HOM05M004367 ORTHO05M003631 3.0e-16 89.4 275 33.5
Glyma.12G167600 Glycine max HOM05M004367 ORTHO05M003631 1.5e-15 87.0 278 33.5
TRIDC5BG020290 Triticum dicoccoides HOM05M004367 ORTHO05M003631 1.3e-14 84.0 221 36.2
Spipo4G0097400 Spirodela polyrhiza HOM05M004367 ORTHO05M003631 2.2e-14 83.2 185 36.8
PH02Gene43089 Phyllostachys edulis HOM05M009018 ORTHO05M003631 6.3e-14 81.6 283 31.1
Zm00007a00045061 Zea mays B104 HOM05M005510 ORTHO05M005942 5.3e-13 78.6 282 34.4
Zm00001eb408480 Zea mays B73 HOM05M004367 ORTHO05M003631 1.6e-12 77.0 150 41.3
Zm00001eb391910 Zea mays B73 HOM05M009018 ORTHO05M003631 2.6e-12 76.3 254 32.3
Zm00007a00045632 Zea mays B104 HOM05M009018 ORTHO05M003631 2.6e-12 76.3 254 32.3
PH02Gene20787 Phyllostachys edulis HOM05M009018 ORTHO05M003631 3.8e-11 72.4 281 28.1
GWHGAORA023999 Cenchrus purpureus HOM05M009018 ORTHO05M003631 5.0e-11 72.0 287 27.5
Ot_Chr1_g11438 Oropetium thomaeum HOM05M009018 ORTHO05M003631 5.0e-11 72.0 274 28.5
Zm00001eb243820 Zea mays B73 HOM05M009018 ORTHO05M003631 5.0e-11 72.0 249 29.3
AET7Gv20827500 Aegilops tauschii HOM05M009018 ORTHO05M003631 8.5e-11 71.2 286 29.7
Seita.1G192500 Setaria italica HOM05M009018 ORTHO05M003631 8.5e-11 71.2 285 26.7
TraesCS7D03G0783600 Triticum aestivum HOM05M009018 ORTHO05M003631 8.5e-11 71.2 286 29.7
Zjn_sc00020.1.g01080.1.am.mk Zoysia japonica ssp. nagirizaki HOM05M009018 ORTHO05M003631 1.1e-10 70.9 282 29.1
Sspon.04G0010340-1A Saccharum spontaneum HOM05M009018 ORTHO05M003631 1.5e-10 70.5 128 39.1
Sspon.04G0010340-1P Saccharum spontaneum HOM05M009018 ORTHO05M003631 1.5e-10 70.5 128 39.1
Sspon.04G0010340-2C Saccharum spontaneum HOM05M009018 ORTHO05M003631 1.5e-10 70.5 128 39.1
Sevir.1G196300 Setaria viridis HOM05M009018 ORTHO05M003631 1.9e-10 70.1 285 26.7
DDU290G0005 Dioscorea dumetorum HOM05M004367 ORTHO05M003631 2.5e-10 69.7 276 27.5
DDU445G0159 Dioscorea dumetorum HOM05M004367 ORTHO05M003631 2.5e-10 69.7 276 27.5
PH02Gene15644 Phyllostachys edulis HOM05M005510 ORTHO05M005942 2.5e-10 69.7 74 59.5
Misin07G358200 Miscanthus sinensis HOM05M009018 ORTHO05M003631 3.6e-09 65.9 128 37.5
Pahal.1G265700 Panicum hallii HOM05M009018 ORTHO05M003631 3.6e-09 65.9 286 27.6
V3.Lp_chr6_0G10032 Lolium perenne HOM05M009018 ORTHO05M003631 4.7e-09 65.5 285 29.5
GWHGASIY039709 Secale cereale HOM05M009018 ORTHO05M003631 4.7e-09 65.5 286 27.6
GWHGAZTO018995 Oryza alta HOM05M009018 ORTHO05M003631 8.0e-09 64.7 124 41.1
Horvu_MOREX_7H01G459000 Hordeum vulgare HOM05M009018 ORTHO05M003631 1.4e-08 63.9 286 27.6
TraesCS7B03G0656000 Triticum aestivum HOM05M009018 ORTHO05M003631 2.3e-08 63.2 286 28.0
TRIDC7BG038630 Triticum dicoccoides HOM05M009018 ORTHO05M003631 2.3e-08 63.2 286 28.0
Zjn_sc00097.1.g00430.1.sm.mk Zoysia japonica ssp. nagirizaki HOM05M004367 ORTHO05M003631 2.3e-08 63.2 304 28.3
ATR0090G002 Amborella trichopoda HOM05M004367 ORTHO05M003631 3.0e-08 62.8 188 30.3
OsR498G0204103800.01 Oryza sativa ssp. indica HOM05M009018 ORTHO05M003631 5.2e-08 62.0 162 35.2
OsKitaake02g205800 Oryza sativa Kitaake HOM05M009018 ORTHO05M003631 1.2e-07 60.8 162 34.6
Os02g0554200 Oryza sativa ssp. japonica HOM05M009018 ORTHO05M003631 1.2e-07 60.8 162 34.6
Sobic.004G176100 Sorghum bicolor HOM05M009018 ORTHO05M003631 1.5e-07 60.5 128 35.9
TRITD7Av1G187320 Triticum turgidum HOM05M009018 ORTHO05M003631 3.3e-07 59.3 289 27.0
TraesCS7A03G0853600 Triticum aestivum HOM05M009018 ORTHO05M003631 7.5e-07 58.2 289 27.0
OB02G27900 Oryza brachyantha HOM05M001837 ORTHO05M001862 1.3e-06 57.4 248 29.4
Zosma03g36710 Zostera marina HOM05M004367 ORTHO05M003631 2.2e-06 56.6 265 25.7
Misin08G163300 Miscanthus sinensis HOM05M009018 ORTHO05M003631 8.2e-06 54.7 239 27.2

Aegilops tauschii (2 genes)
Allium sativum (1 genes)
Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Anthoceros agrestis (0 genes)
Arabidopsis thaliana (0 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (3 genes)
Cenchrus purpureus (4 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (4 genes)
Dioscorea dumetorum (3 genes)
Elaeis guineensis (3 genes)
Eragrostis curvula (3 genes)
Glycine max (1 genes)
Hordeum vulgare (3 genes)
Lolium perenne (3 genes)
Magnolia biondii (0 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (4 genes)
Oropetium thomaeum (2 genes)
Oryza alta (5 genes)
Oryza brachyantha (2 genes)
Oryza sativa Kitaake (3 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (3 genes)
Panicum hallii (3 genes)
Phyllostachys edulis (5 genes)
Physcomitrium patens (0 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (10 genes)
Secale cereale (4 genes)
Selaginella moellendorffii (0 genes)
Sequoiadendron giganteum (0 genes)
Setaria italica (5 genes)
Setaria viridis (3 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (9 genes)
Triticum dicoccoides (3 genes)
Triticum turgidum (4 genes)
Vanilla planifolia (1 genes)
Zea mays B73 (5 genes)
Zea mays B104 (3 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (3 genes)

Program Settings