Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
OsKitaake11g036200 Oryza sativa Kitaake HOM05M005711 ORTHO05M006826 2.9e-171 604.4 299 100.0
Os11g0153900 Oryza sativa ssp. japonica HOM05M005711 ORTHO05M006826 2.9e-171 604.4 299 100.0
GWHGAZTO062691 Oryza alta HOM05M005711 ORTHO05M006826 2.1e-166 588.2 297 96.3
OB11G12800 Oryza brachyantha HOM05M005711 ORTHO05M006826 1.8e-165 585.1 298 95.0
Sevir.7G311400 Setaria viridis HOM05M005711 ORTHO05M006826 1.5e-156 555.4 297 90.2
Seita.7G299700 Setaria italica HOM05M005711 ORTHO05M006826 2.0e-156 555.1 297 89.9
PH02Gene39189 Phyllostachys edulis HOM05M005711 ORTHO05M006826 2.9e-155 551.2 297 89.6
Pahal.3G030700 Panicum hallii HOM05M005711 ORTHO05M006826 3.7e-155 550.8 297 89.9
GWHGAORA040147 Cenchrus purpureus HOM05M005711 ORTHO05M006826 1.9e-154 548.5 297 88.9
Misin19G249700 Miscanthus sinensis HOM05M005711 ORTHO05M006826 1.9e-154 548.5 298 89.3
Sobic.010G241600 Sorghum bicolor HOM05M005711 ORTHO05M006826 1.9e-154 548.5 298 88.9
Sobic.008G040300 Sorghum bicolor HOM05M005711 ORTHO05M006826 4.1e-154 547.4 298 88.3
V3.Lp_chr5_0G7560 Lolium perenne HOM05M005711 ORTHO05M006826 1.6e-153 545.4 299 87.6
Horvu_MOREX_5H01G230700 Hordeum vulgare HOM05M005711 ORTHO05M006826 3.5e-153 544.3 298 87.9
Misin18G242400 Miscanthus sinensis HOM05M005711 ORTHO05M006826 1.0e-152 542.7 298 87.9
Bradi4g42210 Brachypodium distachyon HOM05M005711 ORTHO05M006826 3.9e-152 540.8 297 87.5
TRITD5Av1G096400 Triticum turgidum HOM05M005711 ORTHO05M006826 5.1e-152 540.4 297 87.9
Sspon.07G0018660-1A Saccharum spontaneum HOM05M005711 ORTHO05M006826 1.1e-151 539.3 292 88.0
GWHGASIY025305 Secale cereale HOM05M005711 ORTHO05M006826 1.1e-151 539.3 294 88.4
Sspon.08G0002980-2B Saccharum spontaneum HOM05M005711 ORTHO05M006826 1.5e-151 538.9 326 82.2
Zm00007a00032100 Zea mays B104 HOM05M005711 ORTHO05M006826 4.3e-151 537.3 298 85.9
TRITD5Bv1G078260 Triticum turgidum HOM05M005711 ORTHO05M006826 5.6e-151 537.0 297 87.2
AET5Gv20346300 Aegilops tauschii HOM05M005711 ORTHO05M006826 1.2e-150 535.8 294 87.4
GWHGAZTO010500 Oryza alta HOM05M005711 ORTHO05M006826 1.2e-150 535.8 269 98.1
Seita.7G327000 Setaria italica HOM05M005711 ORTHO05M006826 1.3e-139 499.2 269 90.0
p5.00_sc00182_p0070 Elaeis guineensis HOM05M005711 ORTHO05M006826 1.3e-134 482.6 297 78.1
Ma02_g02890 Musa acuminata HOM05M005711 ORTHO05M006826 1.6e-134 482.3 297 77.1
Sspon.08G0002980-3C Saccharum spontaneum HOM05M005711 ORTHO05M006826 2.8e-134 481.5 292 81.8
Zm00001eb406890 Zea mays B73 HOM05M005711 ORTHO05M006826 6.2e-134 480.3 269 85.5
CALSI_Maker00013043 Calamus simplicifolius HOM05M005711 ORTHO05M006826 2.6e-132 474.9 294 75.2
CALSI_Maker00027581 Calamus simplicifolius HOM05M005711 ORTHO05M006826 2.6e-132 474.9 294 75.2
Sspon.08G0002980-1A Saccharum spontaneum HOM05M005711 ORTHO05M006826 8.4e-131 469.9 335 73.4
Spipo13G0003500 Spirodela polyrhiza HOM05M005711 ORTHO05M006826 2.1e-129 465.3 293 76.1
HPP92_000055 Vanilla planifolia HOM05M005711 ORTHO05M006826 6.7e-128 460.3 299 74.6
Aco023038 Ananas comosus HOM05M005711 ORTHO05M006826 7.4e-127 456.8 280 77.1
Solyc11g006860.2 Solanum lycopersicum HOM05M005711 ORTHO05M006826 1.6e-126 455.7 291 74.2
Potri.008G019800 Populus trichocarpa HOM05M005711 ORTHO05M006826 1.4e-125 452.6 294 74.5
CDE08G1414 Ceratophyllum demersum HOM05M005711 ORTHO05M006826 1.8e-125 452.2 297 72.1
Asa1G01664 Allium sativum HOM05M005711 ORTHO05M006826 3.8e-123 444.5 281 74.7
ATR0820G296 Amborella trichopoda HOM05M005711 ORTHO05M006826 2.1e-121 438.7 293 71.7
DDU556G0131 Dioscorea dumetorum HOM05M005711 ORTHO05M006826 3.0e-120 434.9 293 72.0
DDU165G0014 Dioscorea dumetorum HOM05M005711 ORTHO05M006826 8.7e-120 433.3 293 71.7
evm.TU.AsparagusV1_10.1698.V1.1 Asparagus officinalis HOM05M005711 ORTHO05M006826 7.4e-119 430.3 271 74.9
AT2G25100 Arabidopsis thaliana HOM05M005711 ORTHO05M006826 1.1e-117 426.4 293 69.6
Zosma02g24680 Zostera marina HOM05M005711 ORTHO05M006826 5.3e-117 424.1 293 66.9
Misin15G053300 Miscanthus sinensis HOM05M005711 ORTHO05M006826 2.1e-113 412.1 225 88.0
SEGI_12354 Sequoiadendron giganteum HOM05M005711 ORTHO05M006826 1.8e-112 409.1 289 68.5
Glyma.10G278500 Glycine max HOM05M005711 ORTHO05M006826 2.1e-110 402.1 269 74.3
Dexi3B01G0003420 Digitaria exilis HOM05M005711 ORTHO05M006826 1.1e-109 399.8 296 68.6
EJB05_29446 Eragrostis curvula HOM05M005711 ORTHO05M006826 4.5e-108 394.4 302 71.5
Dexi3A01G0003390 Digitaria exilis HOM05M005711 ORTHO05M006826 1.0e-107 393.3 298 67.4
OsR498G1119435900.01 Oryza sativa ssp. indica HOM05M005711 ORTHO05M006826 1.1e-106 389.8 192 100.0
Sevir.7G336800 Setaria viridis HOM05M005711 ORTHO05M006826 4.2e-106 387.9 209 89.0
MBI01_g02157_MAGBIO Magnolia biondii HOM05M005711 ORTHO05M006826 7.2e-106 387.1 249 75.5
Dexi2B01G0016500 Digitaria exilis HOM05M005711 ORTHO05M006826 6.9e-101 370.5 298 64.8
PH02Gene26005 Phyllostachys edulis HOM05M005711 ORTHO05M006826 7.7e-100 367.1 221 81.9
GWHGAORA005425 Cenchrus purpureus HOM05M005711 ORTHO05M006826 1.0e-96 356.7 192 88.5
EJB05_29447 Eragrostis curvula HOM05M005711 ORTHO05M006826 3.3e-95 351.7 296 62.2
Zm00007a00049115 Zea mays B104 HOM05M005711 ORTHO05M006826 2.6e-92 342.0 222 78.4
Misin14G034700 Miscanthus sinensis HOM05M005711 ORTHO05M006826 1.0e-91 340.1 192 84.9
AagrBONN_evm.TU.Sc2ySwM_362.477 Anthoceros agrestis HOM05M005711 ORTHO05M006826 3.8e-91 338.2 293 58.0
Dexi2A01G0017490 Digitaria exilis HOM05M005711 ORTHO05M006826 1.2e-89 333.2 183 85.8
Pp3c13_7860 Physcomitrium patens HOM05M005711 ORTHO05M006826 6.7e-88 327.4 295 56.3
Mapoly0006s0052 Marchantia polymorpha HOM05M005711 ORTHO05M006826 3.3e-87 325.1 292 55.1
Asa7G00070 Allium sativum HOM05M005711 ORTHO05M006826 1.7e-70 269.6 280 50.4
SMO347G0320 Selaginella moellendorffii HOM05M005711 ORTHO05M006826 1.0e-64 250.4 272 50.7
Cre17.g701350 Chlamydomonas reinhardtii HOM05M005711 ORTHO05M006826 4.4e-55 218.4 292 38.7
Zosma02g09980 Zostera marina HOM05M005711 ORTHO05M006826 5.0e-51 204.9 143 66.4
CBR_g29781 Chara braunii HOM05M005711 ORTHO05M006826 2.3e-48 196.1 199 54.3
Glyma.07G162800 Glycine max HOM05M005711 ORTHO05M006826 3.1e-40 169.1 147 61.2
Asa5G04648 Allium sativum HOM05M005711 ORTHO05M006826 6.2e-33 144.8 137 58.4
Zm00001eb407010 Zea mays B73 HOM05M005711 ORTHO05M006826 9.9e-31 137.5 82 85.4
p5.00_sc00011_p0010 Elaeis guineensis HOM05M005711 ORTHO05M006826 4.5e-15 85.5 49 79.6
SEGI_12669 Sequoiadendron giganteum HOM05M005711 ORTHO05M006826 5.8e-15 85.1 48 77.1
MBI01_g19134_MAGBIO Magnolia biondii HOM05M005711 ORTHO05M006826 1.3e-14 84.0 46 76.1
Cre13.g561900 Chlamydomonas reinhardtii HOM05M012910 ORTHO05M013036 2.0e-07 60.1 160 30.0
MCO01G455 Micromonas commoda HOM05M012910 ORTHO05M013036 8.4e-06 54.7 168 25.6

Aegilops tauschii (1 genes)
Allium sativum (3 genes)
Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Anthoceros agrestis (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (2 genes)
Cenchrus purpureus (2 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chlamydomonas reinhardtii (2 genes)
Digitaria exilis (4 genes)
Dioscorea dumetorum (2 genes)
Elaeis guineensis (2 genes)
Eragrostis curvula (2 genes)
Glycine max (2 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Magnolia biondii (2 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (4 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (0 genes)
Oryza alta (2 genes)
Oryza brachyantha (1 genes)
Oryza sativa Kitaake (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Panicum hallii (1 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (4 genes)
Secale cereale (1 genes)
Selaginella moellendorffii (1 genes)
Sequoiadendron giganteum (2 genes)
Setaria italica (2 genes)
Setaria viridis (2 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (0 genes)
Triticum dicoccoides (0 genes)
Triticum turgidum (2 genes)
Vanilla planifolia (1 genes)
Zea mays B73 (2 genes)
Zea mays B104 (2 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (0 genes)

Program Settings