Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
OsKitaake11g033300 Oryza sativa Kitaake HOM05M001926 ORTHO05M006962 4.4e-56 220.3 114 100.0
Os11g0150400 Oryza sativa ssp. japonica HOM05M001926 ORTHO05M006962 4.4e-56 220.3 114 100.0
OsR498G1119420600.01 Oryza sativa ssp. indica HOM05M001926 ORTHO05M006962 9.8e-56 219.2 114 99.1
GWHGAZTO010467 Oryza alta HOM05M001926 ORTHO05M006962 2.4e-54 214.5 112 97.3
OB11G12570 Oryza brachyantha HOM05M001926 ORTHO05M006962 1.0e-52 209.1 112 93.8
GWHGAZTO062655 Oryza alta HOM05M001926 ORTHO05M006962 6.6e-52 206.5 108 95.4
Zjn_sc00947.1.g00010.1.sm.mk Zoysia japonica ssp. nagirizaki HOM05M001926 ORTHO05M006962 6.0e-45 183.3 108 80.6
EJB05_02267 Eragrostis curvula HOM05M001926 ORTHO05M006962 1.0e-44 182.6 110 81.8
EJB05_02260 Eragrostis curvula HOM05M001926 ORTHO05M006962 8.6e-44 179.5 110 80.0
Misin15G049500 Miscanthus sinensis HOM05M001926 ORTHO05M006962 2.5e-43 177.9 106 80.2
Sspon.07G0018380-2B Saccharum spontaneum HOM05M001926 ORTHO05M006962 1.2e-42 175.6 110 77.3
Dexi3A01G0002940 Digitaria exilis HOM05M001926 ORTHO05M006962 1.6e-42 175.3 109 77.1
Sobic.008G035400 Sorghum bicolor HOM05M001926 ORTHO05M006962 1.6e-42 175.3 107 78.5
EJB05_29476 Eragrostis curvula HOM05M001926 ORTHO05M006962 2.8e-42 174.5 103 80.6
Pahal.3G027000 Panicum hallii HOM05M001926 ORTHO05M006962 2.8e-42 174.5 107 77.6
Sspon.07G0018380-3D Saccharum spontaneum HOM05M001926 ORTHO05M006962 2.8e-42 174.5 111 76.6
Misin14G038100 Miscanthus sinensis HOM05M001926 ORTHO05M006962 3.6e-42 174.1 106 78.3
Dexi8B01G0002730 Digitaria exilis HOM05M001926 ORTHO05M006962 4.7e-42 173.7 107 77.6
Sspon.07G0018380-1A Saccharum spontaneum HOM05M001926 ORTHO05M006962 4.7e-42 173.7 110 76.4
Dexi8A01G0003010 Digitaria exilis HOM05M001926 ORTHO05M006962 6.2e-42 173.3 107 76.6
Dexi3B01G0003010 Digitaria exilis HOM05M001926 ORTHO05M006962 1.4e-41 172.2 109 76.1
GWHGAORA005473 Cenchrus purpureus HOM05M001926 ORTHO05M006962 2.4e-41 171.4 107 76.6
Seita.7G321300 Setaria italica HOM05M001926 ORTHO05M006962 4.0e-41 170.6 107 76.6
Sevir.7G331600 Setaria viridis HOM05M001926 ORTHO05M006962 4.0e-41 170.6 107 76.6
Seita.8G032000 Setaria italica HOM05M001926 ORTHO05M006962 1.2e-40 169.1 107 74.8
Sevir.8G031600 Setaria viridis HOM05M001926 ORTHO05M006962 1.2e-40 169.1 107 74.8
PH02Gene20909 Phyllostachys edulis HOM05M001926 ORTHO05M006962 2.6e-40 167.9 107 76.6
Zm00007a00011084 Zea mays B104 HOM05M001926 ORTHO05M006962 3.4e-40 167.5 107 75.7
PH02Gene18638 Phyllostachys edulis HOM05M001926 ORTHO05M006962 7.6e-40 166.4 108 76.9
PH02Gene19569 Phyllostachys edulis HOM05M001926 ORTHO05M006962 1.7e-39 165.2 105 75.2
PH02Gene09832 Phyllostachys edulis HOM05M001926 ORTHO05M006962 5.4e-38 160.2 105 73.3
Horvu_MOREX_5H01G226200 Hordeum vulgare HOM05M001926 ORTHO05M006962 2.7e-37 157.9 108 71.3
TraesCS5D03G0346300 Triticum aestivum HOM05M001926 ORTHO05M006962 2.3e-36 154.8 107 70.1
TraesCS5B03G0359400 Triticum aestivum HOM05M001926 ORTHO05M006962 1.1e-35 152.5 108 68.5
TRITD5Bv1G081300 Triticum turgidum HOM05M001926 ORTHO05M006962 1.1e-35 152.5 108 68.5
TraesCS5A03G0363500 Triticum aestivum HOM05M001926 ORTHO05M006962 1.5e-35 152.1 108 68.5
TRIDC5AG023020 Triticum dicoccoides HOM05M001926 ORTHO05M006962 1.5e-35 152.1 108 68.5
TRITD5Av1G098830 Triticum turgidum HOM05M001926 ORTHO05M006962 1.5e-35 152.1 108 68.5
Horvu_MOREX_5H01G226300 Hordeum vulgare HOM05M001926 ORTHO05M006962 3.3e-35 151.0 105 69.5
V3.Lp_chr5_0G7740 Lolium perenne HOM05M001926 ORTHO05M006962 3.3e-35 151.0 103 68.9
GWHGASIY025330 Secale cereale HOM05M001926 ORTHO05M006962 3.3e-35 151.0 110 68.2
TraesCS5A03G0363400 Triticum aestivum HOM05M001926 ORTHO05M006962 7.3e-35 149.8 110 67.3
TRIDC5AG023030 Triticum dicoccoides HOM05M001926 ORTHO05M006962 7.3e-35 149.8 110 67.3
TraesCS5D03G0346200 Triticum aestivum HOM05M001926 ORTHO05M006962 2.1e-34 148.3 110 66.4
GWHGASIY025331 Secale cereale HOM05M001926 ORTHO05M006962 3.6e-34 147.5 108 67.6
Bradi4g42625 Brachypodium distachyon HOM05M001926 ORTHO05M006962 4.8e-34 147.1 110 65.5
TraesCS5B03G0359300 Triticum aestivum HOM05M001926 ORTHO05M006962 8.1e-34 146.4 110 66.4
TRIDC5BG023050 Triticum dicoccoides HOM05M001926 ORTHO05M006962 8.1e-34 146.4 110 66.4
evm.TU.AsparagusV1_04.673.V1.1 Asparagus officinalis HOM05M001926 ORTHO05M006962 4.9e-31 137.1 103 65.0
GWHGAORA040185 Cenchrus purpureus HOM05M001926 ORTHO05M006962 1.2e-29 132.5 77 79.2
Ma09_g08750 Musa acuminata HOM05M001926 ORTHO05M006962 6.0e-29 130.2 102 58.8
Potri.009G148100 Populus trichocarpa HOM05M001926 ORTHO05M006962 6.0e-29 130.2 107 59.8
Potri.004G187500 Populus trichocarpa HOM05M001926 ORTHO05M006962 1.0e-28 129.4 104 58.7
p5.00_sc00012_p0032 Elaeis guineensis HOM05M001926 ORTHO05M006962 1.7e-28 128.6 104 58.7
CALSI_Maker00045173 Calamus simplicifolius HOM05M001926 ORTHO05M006962 3.9e-28 127.5 104 58.7
Ma09_g08760 Musa acuminata HOM05M001926 ORTHO05M006962 1.5e-27 125.6 102 56.9
DDU873G0007 Dioscorea dumetorum HOM05M001926 ORTHO05M006962 4.3e-27 124.0 103 58.3
DDU879G0575 Dioscorea dumetorum HOM05M001926 ORTHO05M006962 4.3e-27 124.0 103 58.3
MBI17_g19801_MAGBIO Magnolia biondii HOM05M001926 ORTHO05M006962 7.3e-27 123.2 102 56.9
Zosma05g04830 Zostera marina HOM05M001926 ORTHO05M006962 1.3e-26 122.5 106 54.7
ATR0820G029 Amborella trichopoda HOM05M001926 ORTHO05M006962 1.6e-26 122.1 101 57.4
CDE04G2325 Ceratophyllum demersum HOM05M001926 ORTHO05M006962 5.3e-25 117.1 103 52.4
p5.00_sc00026_p0009 Elaeis guineensis HOM05M001926 ORTHO05M006962 6.9e-25 116.7 103 55.3
Asa1G01588 Allium sativum HOM05M001926 ORTHO05M006962 1.2e-24 115.9 96 58.3
Solyc11g066950.2 Solanum lycopersicum HOM05M001926 ORTHO05M006962 1.5e-24 115.5 100 56.0
Glyma.13G318600 Glycine max HOM05M001926 ORTHO05M006962 3.4e-24 114.4 97 54.6
TRIDC2AG064780 Triticum dicoccoides HOM05M001926 ORTHO05M006962 3.4e-24 114.4 79 67.1
TRIDC7AG044190 Triticum dicoccoides HOM05M001926 ORTHO05M006962 4.5e-24 114.0 79 67.1
AT5G22580 Arabidopsis thaliana HOM05M001926 ORTHO05M006962 5.8e-24 113.6 105 52.4
Glyma.11G188300 Glycine max HOM05M001926 ORTHO05M006962 1.3e-23 112.5 97 51.5
Glyma.12G086100 Glycine max HOM05M001926 ORTHO05M006962 1.3e-23 112.5 97 51.5
TRIDC3AG025410 Triticum dicoccoides HOM05M001926 ORTHO05M006962 1.7e-23 112.1 79 65.8
Glyma.12G182300 Glycine max HOM05M001926 ORTHO05M006962 2.2e-23 111.7 97 52.6
Glyma.01G075700 Glycine max HOM05M001926 ORTHO05M006962 5.4e-22 107.1 97 48.5
GWHGAORA040414 Cenchrus purpureus HOM05M001926 ORTHO05M000005 1.2e-21 105.9 67 74.6
Glyma.09G127900 Glycine max HOM05M001926 ORTHO05M006962 1.0e-20 102.8 97 48.5
Glyma.13G008100 Glycine max HOM05M001926 ORTHO05M006962 3.9e-20 100.9 97 48.5
Spipo22G0031200 Spirodela polyrhiza HOM05M001926 ORTHO05M004476 6.2e-18 93.6 104 45.2
Ma06_g21760 Musa acuminata HOM05M001926 ORTHO05M004476 4.0e-17 90.9 100 48.0
Misin06G189600 Miscanthus sinensis HOM05M001926 ORTHO05M004476 5.3e-17 90.5 98 44.9
Sspon.03G0011920-2B Saccharum spontaneum HOM05M001926 ORTHO05M004476 5.3e-17 90.5 98 44.9
Sspon.03G0011920-3C Saccharum spontaneum HOM05M001926 ORTHO05M004476 5.3e-17 90.5 98 44.9
Sobic.003G210100 Sorghum bicolor HOM05M001926 ORTHO05M004476 5.3e-17 90.5 98 43.9
Sspon.03G0011920-1A Saccharum spontaneum HOM05M001926 ORTHO05M004476 6.9e-17 90.1 98 44.9
Aco013679 Ananas comosus HOM05M001926 ORTHO05M004476 9.0e-17 89.7 100 45.0
Asa8G03735 Allium sativum HOM05M001926 ORTHO05M004476 1.5e-16 89.0 98 45.9
p5.00_sc00010_p0033 Elaeis guineensis HOM05M001926 ORTHO05M004476 2.0e-16 88.6 98 44.9
MBI19_g32692_MAGBIO Magnolia biondii HOM05M006948 ORTHO05M008883 2.0e-16 88.6 98 44.9
evm.TU.AsparagusV1_08.3268.V1.1 Asparagus officinalis HOM05M001926 ORTHO05M004476 4.5e-16 87.4 107 43.0
Sspon.03G0011920-1P Saccharum spontaneum HOM05M001926 ORTHO05M004476 4.5e-16 87.4 98 43.9
Glyma.04G082200 Glycine max HOM05M001926 ORTHO05M004476 5.8e-16 87.0 98 42.9
DDU479G0040 Dioscorea dumetorum HOM05M001926 ORTHO05M004476 7.6e-16 86.7 108 43.5
OB01G27260 Oryza brachyantha HOM05M001926 ORTHO05M004476 7.6e-16 86.7 98 43.9
Potri.010G037500 Populus trichocarpa HOM05M001926 ORTHO05M004476 7.6e-16 86.7 103 44.7
EJB05_56415 Eragrostis curvula HOM05M001926 ORTHO05M004476 1.0e-15 86.3 102 42.2
Glyma.06G083900 Glycine max HOM05M001926 ORTHO05M004476 1.0e-15 86.3 98 42.9
Zm00001eb357750 Zea mays B73 HOM05M001926 ORTHO05M004476 1.0e-15 86.3 98 42.9
Zm00007a00024228 Zea mays B104 HOM05M001926 ORTHO05M004476 1.0e-15 86.3 98 42.9
ATR0693G141 Amborella trichopoda HOM05M001926 ORTHO05M004476 1.3e-15 85.9 98 41.8
GWHGAORA044785 Cenchrus purpureus HOM05M001926 ORTHO05M004476 1.3e-15 85.9 98 42.9
AT3G17210 Arabidopsis thaliana HOM05M001926 ORTHO05M004476 2.2e-15 85.1 98 41.8
TraesCS2B03G0106300 Triticum aestivum HOM05M001926 ORTHO05M004476 3.8e-15 84.3 102 43.1
TraesCS2D03G0066800 Triticum aestivum HOM05M001926 ORTHO05M004476 3.8e-15 84.3 102 43.1
GWHGAORA017172 Cenchrus purpureus HOM05M001926 ORTHO05M004476 4.9e-15 84.0 98 41.8
TRIDC2BG004540 Triticum dicoccoides HOM05M001926 ORTHO05M004476 4.9e-15 84.0 102 43.1
Bradi4g04380 Brachypodium distachyon HOM05M001926 ORTHO05M004476 6.5e-15 83.6 103 40.8
GWHGAORA011652 Cenchrus purpureus HOM05M001926 ORTHO05M004476 6.5e-15 83.6 98 41.8
Ot_Chr3_g25420 Oropetium thomaeum HOM05M001926 ORTHO05M004476 6.5e-15 83.6 102 40.2
Potri.010G037200 Populus trichocarpa HOM05M001926 ORTHO05M004476 6.5e-15 83.6 103 43.7
Seita.5G181300 Setaria italica HOM05M001926 ORTHO05M004476 6.5e-15 83.6 98 40.8
Sevir.5G182766 Setaria viridis HOM05M001926 ORTHO05M004476 6.5e-15 83.6 98 40.8
AET2Gv20059100 Aegilops tauschii HOM05M001926 ORTHO05M004476 8.4e-15 83.2 102 42.2
GWHGAORA017146 Cenchrus purpureus HOM05M001926 ORTHO05M004476 8.4e-15 83.2 98 40.8
GWHGAORA047249 Cenchrus purpureus HOM05M001926 ORTHO05M004476 8.4e-15 83.2 98 41.8
GWHGAORA047250 Cenchrus purpureus HOM05M001926 ORTHO05M004476 8.4e-15 83.2 98 41.8
Dexi1A01G0014580 Digitaria exilis HOM05M001926 ORTHO05M004476 8.4e-15 83.2 98 40.8
Horvu_MOREX_2H01G034900 Hordeum vulgare HOM05M001926 ORTHO05M004476 8.4e-15 83.2 98 43.9
GWHGAZTO055466 Oryza alta HOM05M001926 ORTHO05M004476 8.4e-15 83.2 102 42.2
Pahal.5G277900 Panicum hallii HOM05M001926 ORTHO05M004476 8.4e-15 83.2 98 42.9
GWHGASIY041792 Secale cereale HOM05M001926 ORTHO05M004476 8.4e-15 83.2 102 43.1
CALSI_Maker00036091 Calamus simplicifolius HOM05M001926 ORTHO05M004476 1.1e-14 82.8 98 44.9
TraesCS2A03G0072100 Triticum aestivum HOM05M001926 ORTHO05M004476 1.1e-14 82.8 102 42.2
Zjn_sc00073.1.g00490.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM05M001926 ORTHO05M004476 1.1e-14 82.8 100 42.0
Dexi1B01G0013720 Digitaria exilis HOM05M001926 ORTHO05M004476 1.4e-14 82.4 98 40.8
Seita.5G181400 Setaria italica HOM05M001926 ORTHO05M004476 1.4e-14 82.4 98 40.8
Sevir.5G182800 Setaria viridis HOM05M001926 ORTHO05M004476 1.4e-14 82.4 98 40.8
OsKitaake01g186800 Oryza sativa Kitaake HOM05M001926 ORTHO05M004476 1.9e-14 82.0 98 40.8
OsR498G0101117500.01 Oryza sativa ssp. indica HOM05M001926 ORTHO05M004476 1.9e-14 82.0 98 40.8
Os01g0516600 Oryza sativa ssp. japonica HOM05M001926 ORTHO05M004476 1.9e-14 82.0 98 40.8
TRITD2Av1G008560 Triticum turgidum HOM05M001926 ORTHO05M004476 1.9e-14 82.0 102 43.1
HPP92_015244 Vanilla planifolia HOM05M001926 ORTHO05M004476 2.5e-14 81.6 96 41.7
GWHGAORA044793 Cenchrus purpureus HOM05M001926 ORTHO05M004476 4.2e-14 80.9 95 42.1
Potri.010G150900 Populus trichocarpa HOM05M001926 ORTHO05M004476 4.2e-14 80.9 98 40.8
ATR0757G143 Amborella trichopoda HOM05M001926 ORTHO05M004476 5.5e-14 80.5 104 39.4
Mapoly0058s0001 Marchantia polymorpha HOM05M001926 ORTHO05M004476 7.1e-14 80.1 104 43.3
PH02Gene33321 Phyllostachys edulis HOM05M001926 ORTHO05M004476 7.1e-14 80.1 102 40.2
Solyc05g053310.3 Solanum lycopersicum HOM05M001926 ORTHO05M004476 7.1e-14 80.1 98 40.8
TRIDC2AG003950 Triticum dicoccoides HOM05M001926 ORTHO05M004476 7.1e-14 80.1 100 43.0
TRITD2Bv1G011710 Triticum turgidum HOM05M001926 ORTHO05M004476 7.1e-14 80.1 102 42.2
GWHGAORA008905 Cenchrus purpureus HOM05M001926 ORTHO05M004476 1.2e-13 79.3 96 40.6
OsKitaake01g186700 Oryza sativa Kitaake HOM05M001926 ORTHO05M004476 2.7e-13 78.2 98 39.8
OsR498G0101116900.01 Oryza sativa ssp. indica HOM05M001926 ORTHO05M004476 2.7e-13 78.2 98 39.8
SEGI_17677 Sequoiadendron giganteum HOM05M001926 ORTHO05M004476 3.5e-13 77.8 99 38.4
GWHGAZTO003050 Oryza alta HOM05M001926 ORTHO05M004476 4.6e-13 77.4 102 39.2
TraesCS2B03G0106200 Triticum aestivum HOM05M001926 ORTHO05M004476 2.3e-12 75.1 103 38.8
ATR1096G001 Amborella trichopoda HOM05M001926 ORTHO05M006962 3.0e-12 74.7 59 59.3
Horvu_MOREX_2H01G034700 Hordeum vulgare HOM05M001926 ORTHO05M004476 3.0e-12 74.7 103 37.9
TRIDC2AG003940 Triticum dicoccoides HOM05M001926 ORTHO05M004476 5.1e-12 73.9 103 37.9
TRIDC2BG004530 Triticum dicoccoides HOM05M001926 ORTHO05M004476 5.1e-12 73.9 103 37.9
TRITD2Av1G008530 Triticum turgidum HOM05M001926 ORTHO05M004476 5.1e-12 73.9 103 37.9
SMO147G0378 Selaginella moellendorffii HOM05M001926 ORTHO05M004476 6.7e-12 73.6 96 39.6
V3.Lp_chr1_0G1230 Lolium perenne HOM05M001926 ORTHO05M004476 8.7e-12 73.2 113 38.9
TraesCS2D03G0066700 Triticum aestivum HOM05M001926 ORTHO05M004476 4.3e-11 70.9 103 35.9
HPP92_015245 Vanilla planifolia HOM05M001926 ORTHO05M004476 4.3e-11 70.9 99 38.4
SEGI_14059 Sequoiadendron giganteum HOM05M001926 ORTHO05M004476 5.7e-11 70.5 97 33.0
SEGI_19086 Sequoiadendron giganteum HOM05M001926 ORTHO05M004476 5.7e-11 70.5 97 33.0
SEGI_19672 Sequoiadendron giganteum HOM05M001926 ORTHO05M004476 5.7e-11 70.5 103 32.0
EJB05_57488 Eragrostis curvula HOM05M001926 ORTHO05M004476 2.1e-10 68.6 137 31.4
Sspon.03G0011920-4D Saccharum spontaneum HOM05M001926 ORTHO05M004476 6.2e-10 67.0 103 38.8
evm.TU.AsparagusV1_08.3271.V1.1 Asparagus officinalis HOM05M001926 ORTHO05M004476 3.1e-09 64.7 68 48.5
evm.TU.AsparagusV1_07.1200.V1.1 Asparagus officinalis HOM05M001926 ORTHO05M004476 2.9e-07 58.2 102 32.4
MBI02_g25246_MAGBIO Magnolia biondii HOM05M001926 ORTHO05M004476 5.0e-07 57.4 106 34.9
MBI02_g25818_MAGBIO Magnolia biondii HOM05M001926 ORTHO05M004476 8.4e-07 56.6 96 34.4
Glyma.06G084000 Glycine max HOM05M001926 ORTHO05M004476 7.2e-06 53.5 56 42.9
Seita.5G181200 Setaria italica HOM05M001926 ORTHO05M004476 9.3e-06 53.1 56 42.9
Sevir.5G182733 Setaria viridis HOM05M001926 ORTHO05M004476 9.3e-06 53.1 56 42.9


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