Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
OsKitaake11g030100 Oryza sativa Kitaake HOM05M003544 ORTHO05M004102 0.0e+00 1080.9 568 100.0
Os11g0146700 Oryza sativa ssp. japonica HOM05M003544 ORTHO05M004102 0.0e+00 1080.9 568 100.0
OsR498G1119407400.01 Oryza sativa ssp. indica HOM05M003544 ORTHO05M004102 9.1e-312 1072.0 568 99.5
GWHGAZTO062620 Oryza alta HOM05M003544 ORTHO05M004102 3.0e-302 1040.4 568 97.2
GWHGAZTO010424 Oryza alta HOM05M003544 ORTHO05M004102 2.9e-297 1023.8 568 95.8
OB12G12790 Oryza brachyantha HOM05M003544 ORTHO05M004102 6.4e-289 996.1 568 91.2
Seita.7G322300 Setaria italica HOM05M003544 ORTHO05M004102 5.1e-278 959.9 570 88.2
Pahal.3G023800 Panicum hallii HOM05M003544 ORTHO05M004102 6.6e-278 959.5 569 88.8
Sevir.7G332400 Setaria viridis HOM05M003544 ORTHO05M004102 3.3e-277 957.2 570 88.2
PH02Gene37981 Phyllostachys edulis HOM05M003544 ORTHO05M004102 3.6e-276 953.7 569 88.0
GWHGAORA040447 Cenchrus purpureus HOM05M003544 ORTHO05M004102 2.0e-274 948.0 568 86.6
GWHGAORA005510 Cenchrus purpureus HOM05M003544 ORTHO05M004102 2.6e-274 947.6 570 86.3
Sobic.005G032800 Sorghum bicolor HOM05M003544 ORTHO05M004102 5.8e-274 946.4 568 85.4
Os12g0143400 Oryza sativa ssp. japonica HOM05M003544 ORTHO05M004102 3.8e-273 943.7 568 89.1
Seita.8G027800 Setaria italica HOM05M003544 ORTHO05M004102 1.9e-272 941.4 576 87.0
Sevir.8G029300 Setaria viridis HOM05M003544 ORTHO05M004102 1.9e-272 941.4 576 87.0
Misin14G014200 Miscanthus sinensis HOM05M003544 ORTHO05M004102 7.9e-271 936.0 568 87.1
PH02Gene44893 Phyllostachys edulis HOM05M003544 ORTHO05M004102 1.7e-270 934.9 548 85.9
Misin10G018200 Miscanthus sinensis HOM05M003544 ORTHO05M004102 2.3e-270 934.5 568 84.0
Ot_Chr2_gn32734 Oropetium thomaeum HOM05M003544 ORTHO05M004102 8.7e-270 932.6 547 86.7
Pahal.8G027600 Panicum hallii HOM05M003544 ORTHO05M004102 1.9e-269 931.4 568 86.4
Sspon.07G0016990-4D Saccharum spontaneum HOM05M003544 ORTHO05M004102 2.5e-269 931.0 568 86.6
Dexi8B01G0002450 Digitaria exilis HOM05M003544 ORTHO05M004102 4.3e-269 930.2 570 86.8
Sobic.008G011000 Sorghum bicolor HOM05M003544 ORTHO05M004102 4.3e-269 930.2 568 86.3
Sspon.07G0016990-2B Saccharum spontaneum HOM05M003544 ORTHO05M004102 1.1e-267 925.6 568 85.0
EJB05_29541 Eragrostis curvula HOM05M003544 ORTHO05M004102 5.3e-267 923.3 547 86.1
Zm00001eb405000 Zea mays B73 HOM05M003544 ORTHO05M004102 1.5e-266 921.8 569 84.7
EJB05_29564 Eragrostis curvula HOM05M003544 ORTHO05M004102 1.3e-265 918.7 549 85.8
Misin15G024600 Miscanthus sinensis HOM05M003544 ORTHO05M004102 7.1e-264 912.9 568 85.4
Sspon.07G0016990-2P Saccharum spontaneum HOM05M003544 ORTHO05M004102 2.5e-261 904.4 548 85.2
Dexi8A01G0002780 Digitaria exilis HOM05M003544 ORTHO05M004102 3.7e-260 900.6 556 84.5
TraesCS4B03G0312200 Triticum aestivum HOM05M003544 ORTHO05M004102 2.2e-257 891.3 568 82.2
TRITD4Av1G145750 Triticum turgidum HOM05M003544 ORTHO05M004102 2.2e-257 891.3 568 82.2
TRITD4Bv1G058020 Triticum turgidum HOM05M003544 ORTHO05M004102 2.2e-257 891.3 568 82.2
TraesCS4A03G0500900 Triticum aestivum HOM05M003544 ORTHO05M004102 6.5e-257 889.8 568 82.0
Bradi4g26590 Brachypodium distachyon HOM05M003544 ORTHO05M004102 1.1e-256 889.0 569 81.5
GWHGASIY019444 Secale cereale HOM05M003544 ORTHO05M004102 1.1e-256 889.0 569 81.9
AET4Gv20274200 Aegilops tauschii HOM05M003544 ORTHO05M004102 1.4e-256 888.6 568 82.0
Dexi3B01G0002680 Digitaria exilis HOM05M003544 ORTHO05M004102 5.5e-256 886.7 547 83.2
TraesCS4D03G0255400 Triticum aestivum HOM05M003544 ORTHO05M004102 5.5e-256 886.7 568 81.9
Horvu_MOREX_4H01G170300 Hordeum vulgare HOM05M003544 ORTHO05M004102 4.6e-255 883.6 569 81.5
Zm00007a00025166 Zea mays B104 HOM05M003544 ORTHO05M004102 2.5e-253 877.9 585 78.3
Dexi3A01G0002600 Digitaria exilis HOM05M003544 ORTHO05M004102 1.5e-250 868.6 547 82.4
V3.Lp_chr4_0G13128 Lolium perenne HOM05M003544 ORTHO05M004102 2.9e-249 864.4 601 77.5
Sspon.07G0016990-3P Saccharum spontaneum HOM05M003544 ORTHO05M004102 4.2e-240 833.9 566 79.7
Aco023010 Ananas comosus HOM05M003544 ORTHO05M004102 9.4e-240 832.8 566 76.9
p5.00_sc00086_p0033 Elaeis guineensis HOM05M003544 ORTHO05M004102 4.1e-235 817.4 567 75.5
Ma02_g02030 Musa acuminata HOM05M003544 ORTHO05M004102 3.4e-234 814.3 567 74.4
MBI19_g37995_MAGBIO Magnolia biondii HOM05M003544 ORTHO05M004102 3.9e-230 800.8 570 72.6
Zm00001eb163350 Zea mays B73 HOM05M003544 ORTHO05M004102 5.3e-227 790.4 490 82.7
GWHGAORA042934 Cenchrus purpureus HOM05M003544 ORTHO05M004102 2.9e-225 784.6 464 85.3
DDU337G0011 Dioscorea dumetorum HOM05M003544 ORTHO05M004102 4.0e-222 774.2 569 70.8
DDU272G0346 Dioscorea dumetorum HOM05M003544 ORTHO05M004102 5.2e-222 773.9 569 70.8
OsKitaake12g034400 Oryza sativa Kitaake HOM05M003544 ORTHO05M004102 7.5e-221 770.0 418 95.0
Potri.018G064100 Populus trichocarpa HOM05M003544 ORTHO05M004102 1.4e-219 765.8 570 70.4
CDE05G0310 Ceratophyllum demersum HOM05M003544 ORTHO05M004102 2.7e-218 761.5 550 72.2
Glyma.15G183100 Glycine max HOM05M003544 ORTHO05M004102 2.7e-218 761.5 547 72.4
Glyma.09G074100 Glycine max HOM05M003544 ORTHO05M004102 2.2e-217 758.4 549 72.9
Sspon.07G0016990-1P Saccharum spontaneum HOM05M003544 ORTHO05M004102 1.6e-215 752.3 490 80.6
Sspon.07G0016990-3C Saccharum spontaneum HOM05M003544 ORTHO05M004102 8.0e-215 750.0 477 84.9
evm.TU.AsparagusV1_02.1339.V1.1 Asparagus officinalis HOM05M003544 ORTHO05M004102 5.2e-214 747.3 573 68.9
ATR0681G246 Amborella trichopoda HOM05M003544 ORTHO05M004102 3.6e-207 724.5 569 66.8
Solyc07g017490.3 Solanum lycopersicum HOM05M003544 ORTHO05M004102 4.7e-207 724.2 571 68.3
GWHGAZTO065591 Oryza alta HOM05M003544 ORTHO05M004102 2.3e-206 721.8 394 94.4
HPP92_017869 Vanilla planifolia HOM05M003544 ORTHO05M004102 4.4e-205 717.6 569 67.8
Zjn_sc00097.1.g01740.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM05M003544 ORTHO05M004102 1.7e-204 715.7 568 71.5
Zosma06g05450 Zostera marina HOM05M003544 ORTHO05M004102 2.8e-204 714.9 553 68.4
CDE05G0890 Ceratophyllum demersum HOM05M003544 ORTHO05M004102 4.9e-204 714.1 550 69.3
Asa4G03045 Allium sativum HOM05M003544 ORTHO05M004102 9.2e-203 709.9 555 70.6
GWHGAZTO013656 Oryza alta HOM05M003544 ORTHO05M004102 5.9e-202 707.2 400 92.2
CALSI_Maker00001573 Calamus simplicifolius HOM05M003544 ORTHO05M004102 4.4e-197 691.0 626 63.1
TRIDC4BG020760 Triticum dicoccoides HOM05M003544 ORTHO05M004102 1.3e-193 679.5 426 83.6
TRIDC4AG029630 Triticum dicoccoides HOM05M003544 ORTHO05M004102 1.7e-193 679.1 424 83.7
AT2G26460 Arabidopsis thaliana HOM05M003544 ORTHO05M004102 1.2e-189 666.4 572 62.8
GWHGAORA010621 Cenchrus purpureus HOM05M003544 ORTHO05M004102 3.7e-188 661.4 568 66.0
SEGI_40202 Sequoiadendron giganteum HOM05M003544 ORTHO05M004102 3.4e-181 638.3 561 62.0
GWHGAZTO013666 Oryza alta HOM05M003544 ORTHO05M004102 2.8e-175 618.6 584 64.7
Mapoly0117s0005 Marchantia polymorpha HOM05M003544 ORTHO05M004102 1.3e-164 583.2 575 58.1
Zm00007a00029864 Zea mays B104 HOM05M003544 ORTHO05M004102 6.6e-161 570.9 366 82.0
Spipo0G0033900 Spirodela polyrhiza HOM05M003544 ORTHO05M008765 2.1e-159 565.8 468 66.5
CBR_g41264 Chara braunii HOM05M003544 ORTHO05M004102 1.5e-128 463.4 559 49.7
SMO266G0005 Selaginella moellendorffii HOM05M003544 ORTHO05M004102 1.1e-126 457.2 582 49.1
Misin10G016000 Miscanthus sinensis HOM05M003544 ORTHO05M004102 1.4e-126 456.8 546 54.2
CALSI_Maker00011878 Calamus simplicifolius HOM05M003544 ORTHO05M004102 5.3e-126 454.9 340 68.5
AagrBONN_evm.TU.Sc2ySwM_344.4798 Anthoceros agrestis HOM05M003544 ORTHO05M004102 3.1e-118 429.1 482 52.9
GWHGAZTO013655 Oryza alta HOM05M003544 ORTHO05M004102 2.8e-90 336.3 196 92.9
Pp3c19_4680 Physcomitrium patens HOM05M003544 ORTHO05M004102 1.6e-77 293.9 332 52.7
PH02Gene21599 Phyllostachys edulis HOM05M003544 ORTHO05M004102 3.3e-75 286.2 297 56.6
OsR498G1220921600.01 Oryza sativa ssp. indica HOM05M003544 ORTHO05M004102 2.1e-74 283.5 163 92.0
Zm00007a00029862 Zea mays B104 HOM05M003544 ORTHO05M004102 2.1e-74 283.5 163 89.6
PH02Gene25472 Phyllostachys edulis HOM05M003544 ORTHO05M004102 6.8e-73 278.5 167 84.4
GWHGAORA005737 Cenchrus purpureus HOM05M003544 ORTHO05M004102 4.6e-61 239.2 507 36.3
Zjn_sc00028.1.g02820.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M003544 ORTHO05M004102 2.6e-56 223.4 365 46.0
GWHGAORA005482 Cenchrus purpureus HOM05M003544 ORTHO05M004102 9.2e-54 214.9 209 60.3
SMO270G0035 Selaginella moellendorffii HOM05M003544 ORTHO05M004102 2.4e-49 200.3 408 37.0
Sspon.07G0016990-1A Saccharum spontaneum HOM05M003544 ORTHO05M004102 6.9e-49 198.7 116 96.6
SMO270G0044 Selaginella moellendorffii HOM05M003544 ORTHO05M004102 5.8e-48 195.7 134 70.9
MisinT249200 Miscanthus sinensis HOM05M003544 ORTHO05M004102 2.3e-44 183.7 111 82.9
PH02Gene45835 Phyllostachys edulis HOM05M003544 ORTHO05M004102 7.3e-43 178.7 199 54.3
Zm00007a00043556 Zea mays B104 HOM05M001839 ORTHO05M004102 2.1e-42 177.2 110 80.9
Zm00007a00013861 Zea mays B104 HOM05M001839 ORTHO05M004102 4.8e-42 176.0 110 80.9
Cre16.g688750 Chlamydomonas reinhardtii HOM05M003544 ORTHO05M004102 5.4e-38 162.5 605 29.4
PH02Gene02648 Phyllostachys edulis HOM05M003544 ORTHO05M004102 2.5e-27 127.1 66 97.0
PH02Gene47531 Phyllostachys edulis HOM05M003544 ORTHO05M004102 2.8e-26 123.6 66 93.9
PH02Gene20715 Phyllostachys edulis HOM05M003544 ORTHO05M004102 2.9e-23 113.6 61 86.9
MCO14G054 Micromonas commoda HOM05M003544 ORTHO05M004102 3.5e-21 106.7 181 38.1
OsR498G1220918400.01 Oryza sativa ssp. indica HOM05M003544 ORTHO05M004102 6.7e-12 75.9 53 77.4
PH02Gene29543 Phyllostachys edulis HOM05M000938 ORTHO05M004102 2.0e-11 74.3 41 82.9
Misin10G002600 Miscanthus sinensis HOM05M003544 ORTHO05M004102 4.1e-09 66.6 38 84.2
Misin10G002800 Miscanthus sinensis HOM05M003544 ORTHO05M004102 4.1e-09 66.6 38 84.2
Misin05G073900 Miscanthus sinensis HOM05M003544 ORTHO05M004102 2.0e-08 64.3 39 79.5

Aegilops tauschii (1 genes)
Allium sativum (1 genes)
Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Anthoceros agrestis (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (2 genes)
Cenchrus purpureus (6 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chlamydomonas reinhardtii (1 genes)
Digitaria exilis (4 genes)
Dioscorea dumetorum (2 genes)
Elaeis guineensis (1 genes)
Eragrostis curvula (2 genes)
Glycine max (2 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Magnolia biondii (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (8 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (1 genes)
Oryza alta (6 genes)
Oryza brachyantha (1 genes)
Oryza sativa Kitaake (2 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (2 genes)
Panicum hallii (2 genes)
Phyllostachys edulis (9 genes)
Physcomitrium patens (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (7 genes)
Secale cereale (1 genes)
Selaginella moellendorffii (3 genes)
Sequoiadendron giganteum (1 genes)
Setaria italica (2 genes)
Setaria viridis (2 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum dicoccoides (2 genes)
Triticum turgidum (2 genes)
Vanilla planifolia (1 genes)
Zea mays B73 (2 genes)
Zea mays B104 (5 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings