Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0136500 Oryza sativa ssp. japonica HOM05M004313 ORTHO05M004921 4.3e-169 597.0 283 100.0
OsKitaake11g021500 Oryza sativa Kitaake HOM05M004313 ORTHO05M004921 1.1e-167 592.4 284 99.6
Os12g0133400 Oryza sativa ssp. japonica HOM05M004313 ORTHO05M004921 1.1e-159 565.8 283 94.7
OsR498G1220892700.01 Oryza sativa ssp. indica HOM05M004313 ORTHO05M004921 2.6e-158 561.2 284 94.4
OsKitaake12g025600 Oryza sativa Kitaake HOM05M004313 ORTHO05M004921 1.0e-157 559.3 283 94.3
GWHGAZTO010328 Oryza alta HOM05M004313 ORTHO05M004921 5.5e-140 500.4 267 89.9
OB12G12220 Oryza brachyantha HOM05M004313 ORTHO05M004921 3.4e-134 481.1 283 82.0
OB11G11910 Oryza brachyantha HOM05M004313 ORTHO05M004921 5.9e-134 480.3 294 79.9
PH02Gene40902 Phyllostachys edulis HOM05M004313 ORTHO05M004921 4.2e-124 447.6 284 75.0
Bradi4g26330 Brachypodium distachyon HOM05M004313 ORTHO05M004921 7.2e-124 446.8 266 78.9
GWHGAZTO013573 Oryza alta HOM05M004313 ORTHO05M004921 2.8e-120 434.9 232 88.8
EJB05_54857 Eragrostis curvula HOM05M004313 ORTHO05M004921 7.0e-119 430.3 284 71.1
EJB05_54856 Eragrostis curvula HOM05M004313 ORTHO05M004921 1.0e-117 426.4 268 73.9
Sevir.7G322700 Setaria viridis HOM05M004313 ORTHO05M004921 1.0e-117 426.4 264 75.8
V3.Lp_chr4_0G12972 Lolium perenne HOM05M004313 ORTHO05M004921 3.8e-117 424.5 270 75.6
Seita.8G021200 Setaria italica HOM05M004313 ORTHO05M004921 6.5e-117 423.7 276 72.5
Seita.7G312700 Setaria italica HOM05M004313 ORTHO05M004921 8.5e-117 423.3 264 75.4
Dexi3A01G0001990 Digitaria exilis HOM05M004313 ORTHO05M004921 1.5e-116 422.5 264 74.2
Zm00001eb196200 Zea mays B73 HOM05M004313 ORTHO05M004921 3.2e-116 421.4 262 74.4
Zm00007a00027811 Zea mays B104 HOM05M004313 ORTHO05M004921 3.2e-116 421.4 264 74.2
Sspon.05G0030240-2D Saccharum spontaneum HOM05M004313 ORTHO05M004921 4.2e-116 421.0 264 74.6
Pahal.8G020800 Panicum hallii HOM05M004313 ORTHO05M004921 9.4e-116 419.9 263 73.8
Sobic.005G025300 Sorghum bicolor HOM05M004313 ORTHO05M004921 1.2e-115 419.5 264 74.6
EJB05_29679 Eragrostis curvula HOM05M004313 ORTHO05M004921 2.1e-115 418.7 282 70.2
TraesCS4A03G0506300 Triticum aestivum HOM05M004313 ORTHO05M004921 2.1e-115 418.7 278 73.7
AET4Gv20269200 Aegilops tauschii HOM05M004313 ORTHO05M004921 2.7e-115 418.3 279 74.2
Misin09G012700 Miscanthus sinensis HOM05M004313 ORTHO05M004921 2.7e-115 418.3 268 73.1
TraesCS4D03G0250400 Triticum aestivum HOM05M004313 ORTHO05M004921 2.7e-115 418.3 278 74.1
Dexi3B01G0002010 Digitaria exilis HOM05M004313 ORTHO05M004921 4.7e-115 417.5 276 71.7
TraesCS4B03G0306500 Triticum aestivum HOM05M004313 ORTHO05M004921 1.4e-114 416.0 278 73.4
GWHGASIY019432 Secale cereale HOM05M004313 ORTHO05M004921 1.8e-114 415.6 278 73.4
GWHGAORA040512 Cenchrus purpureus HOM05M004313 ORTHO05M004921 3.0e-114 414.8 265 73.6
Dexi3A01G0000070 Digitaria exilis HOM05M004313 ORTHO05M004921 4.0e-114 414.5 276 71.0
Horvu_MOREX_4H01G175400 Hordeum vulgare HOM05M004313 ORTHO05M004921 4.0e-114 414.5 281 72.2
Dexi8B01G0001880 Digitaria exilis HOM05M004313 ORTHO05M004921 5.7e-113 410.6 280 70.0
GWHGAORA010895 Cenchrus purpureus HOM05M004313 ORTHO05M004921 7.5e-113 410.2 264 72.7
GWHGAORA042999 Cenchrus purpureus HOM05M004313 ORTHO05M004921 3.7e-112 407.9 264 72.3
GWHGAZTO065518 Oryza alta HOM05M004313 ORTHO05M004921 6.3e-112 407.1 214 91.1
PH02Gene41552 Phyllostachys edulis HOM05M004313 ORTHO05M004921 1.8e-111 405.6 251 76.1
TRIDC4AG030010 Triticum dicoccoides HOM05M004313 ORTHO05M004921 6.8e-106 387.1 250 75.2
TRIDC4BG020550 Triticum dicoccoides HOM05M004313 ORTHO05M004921 2.0e-105 385.6 251 74.5
Sevir.8G023700 Setaria viridis HOM05M004313 ORTHO05M004921 8.6e-101 370.2 236 73.7
GWHGAORA065397 Cenchrus purpureus HOM05M004313 ORTHO05M004921 1.1e-100 369.8 232 74.6
TRITD4Av1G146970 Triticum turgidum HOM05M004313 ORTHO05M004921 8.9e-98 360.1 232 74.6
GWHGAORA010676 Cenchrus purpureus HOM05M004313 ORTHO05M004921 3.4e-97 358.2 264 65.5
TRITD4Bv1G057060 Triticum turgidum HOM05M004313 ORTHO05M004921 5.7e-97 357.5 232 74.1
Dexi8A01G0002050 Digitaria exilis HOM05M004313 ORTHO05M004921 1.8e-95 352.4 213 77.0
Aco019266 Ananas comosus HOM05M004313 ORTHO05M004921 2.4e-95 352.1 296 57.1
GWHGAORA005578 Cenchrus purpureus HOM05M004313 ORTHO05M004921 1.2e-94 349.7 231 71.4
GWHGASIY017816 Secale cereale HOM05M004313 ORTHO05M004921 1.1e-92 343.2 278 66.2
p5.00_sc00210_p0007 Elaeis guineensis HOM05M004313 ORTHO05M004921 2.1e-91 339.0 266 60.2
Zjn_sc00067.1.g00420.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M004313 ORTHO05M004921 1.8e-90 335.9 296 58.4
MBI13_g32993_MAGBIO Magnolia biondii HOM05M004313 ORTHO05M004921 1.7e-88 329.3 270 56.3
Pahal.3G018900 Panicum hallii HOM05M004313 ORTHO05M004921 1.7e-85 319.3 212 68.9
evm.TU.AsparagusV1_02.1981.V1.1 Asparagus officinalis HOM05M004313 ORTHO05M004921 2.5e-84 315.5 264 58.3
EJB05_29670 Eragrostis curvula HOM05M004313 ORTHO05M004921 2.3e-82 308.9 269 58.0
Zosma03g17480 Zostera marina HOM05M004313 ORTHO05M004921 3.1e-82 308.5 265 55.5
Sspon.05G0030240-1B Saccharum spontaneum HOM05M004313 ORTHO05M004921 6.8e-82 307.4 287 57.5
MBI13_g44214_MAGBIO Magnolia biondii HOM05M004313 ORTHO05M004921 7.5e-81 303.9 267 53.9
Sspon.05G0020100-1A Saccharum spontaneum HOM05M000010 ORTHO05M000671 7.1e-79 297.4 264 58.7
Glyma.15G117500 Glycine max HOM05M004313 ORTHO05M004921 7.8e-78 293.9 268 51.9
Potri.010G238500 Populus trichocarpa HOM05M004313 ORTHO05M004921 3.9e-77 291.6 215 58.1
Ma08_g09200 Musa acuminata HOM05M004313 ORTHO05M004921 2.8e-75 285.4 237 60.3
HPP92_018209 Vanilla planifolia HOM05M004313 ORTHO05M004921 1.4e-74 283.1 265 51.7
Spipo4G0041600 Spirodela polyrhiza HOM05M004313 ORTHO05M004921 1.3e-72 276.6 276 48.9
Asa7G07199 Allium sativum HOM05M004313 ORTHO05M004921 9.2e-71 270.4 227 55.1
CALSI_Maker00006017 Calamus simplicifolius HOM05M004313 ORTHO05M004921 1.9e-68 262.7 274 48.2
ATR1096G030 Amborella trichopoda HOM05M004313 ORTHO05M004921 1.6e-67 259.6 228 51.8
Solyc11g006930.3 Solanum lycopersicum HOM05M004313 ORTHO05M004921 6.2e-67 257.7 218 53.7
Zjn_sc00293.1.g00010.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M004313 ORTHO05M004921 2.0e-65 252.7 226 57.1
Mapoly0020s0170 Marchantia polymorpha HOM05M004313 ORTHO05M004921 4.4e-65 251.5 270 45.6
OsR498G1119382100.01 Oryza sativa ssp. indica HOM05M004313 ORTHO05M004921 2.9e-64 248.8 118 100.0
Misin05G389700 Miscanthus sinensis HOM05M004313 ORTHO05M004921 3.3e-60 235.3 281 50.2
AagrBONN_evm.TU.Sc2ySwM_368.1913 Anthoceros agrestis HOM05M004313 ORTHO05M004921 3.4e-57 225.3 273 41.4
CALSI_Maker00046949 Calamus simplicifolius HOM05M004313 ORTHO05M004921 1.9e-52 209.5 159 61.6
Pp3c5_16220 Physcomitrium patens HOM05M004313 ORTHO05M004921 1.4e-50 203.4 271 41.3
DDU274G0019 Dioscorea dumetorum HOM05M004313 ORTHO05M004921 3.4e-49 198.7 204 49.0
Glyma.02G164100 Glycine max HOM05M004313 ORTHO05M004921 9.3e-47 190.7 172 54.1
PH02Gene42929 Phyllostachys edulis HOM05M004313 ORTHO05M004921 9.3e-47 190.7 107 77.6
SMO172G0015 Selaginella moellendorffii HOM05M004313 ORTHO05M004921 2.1e-46 189.5 244 41.8
PRCOL_00002097 Prasinoderma coloniale HOM05M004313 ORTHO05M004921 4.5e-41 171.8 280 32.5
Misin09G012400 Miscanthus sinensis HOM05M004313 ORTHO05M004921 6.5e-40 167.9 108 69.4
MBI13_g43865_MAGBIO Magnolia biondii HOM05M004313 ORTHO05M004921 9.3e-39 164.1 112 64.3
SEGI_17929 Sequoiadendron giganteum HOM05M004313 ORTHO05M004921 8.7e-37 157.5 168 50.6
MCO07G233 Micromonas commoda HOM05M004313 ORTHO05M004921 9.0e-34 147.5 314 31.8
Cre07.g323750 Chlamydomonas reinhardtii HOM05M004313 ORTHO05M004921 1.6e-27 126.7 283 32.5
Zjn_sc00167.1.g00460.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M000049 ORTHO05M004921 4.8e-27 125.2 89 69.7
Zm00007a00024389 Zea mays B104 HOM05M004313 ORTHO05M004921 5.3e-26 121.7 79 69.6
SEGI_12071 Sequoiadendron giganteum HOM05M004313 ORTHO05M004921 3.4e-17 92.4 117 37.6
Asa2G03820 Allium sativum HOM05M004313 ORTHO05M004921 2.3e-13 79.7 72 50.0
MBI13_g44208_MAGBIO Magnolia biondii HOM05M004313 ORTHO05M004921 7.4e-12 74.7 40 75.0
DDU274G0456 Dioscorea dumetorum HOM05M004313 ORTHO05M004921 3.7e-11 72.4 62 54.8
AT3G11470 Arabidopsis thaliana HOM05M004323 ORTHO05M005186 2.2e-08 63.2 216 25.0
MBI14_g17373_MAGBIO Magnolia biondii HOM05M004323 ORTHO05M005186 2.2e-08 63.2 218 24.8
Aco006525 Ananas comosus HOM05M004323 ORTHO05M005186 1.1e-07 60.8 230 23.5
CALSI_Maker00001287 Calamus simplicifolius HOM05M004323 ORTHO05M005186 1.1e-07 60.8 239 24.7
SMO118G0036 Selaginella moellendorffii HOM05M004323 ORTHO05M005186 1.5e-07 60.5 228 25.9
Solyc09g009960.3 Solanum lycopersicum HOM05M004323 ORTHO05M005186 1.9e-07 60.1 157 24.2
Sevir.6G090700 Setaria viridis HOM05M004323 ORTHO05M005186 2.5e-07 59.7 222 23.4
Glyma.20G074100 Glycine max HOM05M004313 ORTHO05M004921 4.2e-07 58.9 86 38.4
TraesCS1B03G0203300 Triticum aestivum HOM05M004323 ORTHO05M005186 5.5e-07 58.5 210 25.2
Sspon.01G0034140-1B Saccharum spontaneum HOM05M004323 ORTHO05M005186 1.6e-06 57.0 211 23.2
Glyma.13G154600 Glycine max HOM05M004323 ORTHO05M005186 2.7e-06 56.2 224 24.6
Sspon.01G0034140-3D Saccharum spontaneum HOM05M004323 ORTHO05M005186 6.1e-06 55.1 154 25.3

Aegilops tauschii (1 genes)
Allium sativum (2 genes)
Amborella trichopoda (1 genes)
Ananas comosus (2 genes)
Anthoceros agrestis (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (3 genes)
Cenchrus purpureus (6 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chlamydomonas reinhardtii (1 genes)
Digitaria exilis (5 genes)
Dioscorea dumetorum (2 genes)
Elaeis guineensis (1 genes)
Eragrostis curvula (4 genes)
Glycine max (4 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Magnolia biondii (5 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (0 genes)
Oryza alta (3 genes)
Oryza brachyantha (2 genes)
Oryza sativa Kitaake (2 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (2 genes)
Panicum hallii (2 genes)
Phyllostachys edulis (3 genes)
Physcomitrium patens (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Saccharum spontaneum (5 genes)
Secale cereale (2 genes)
Selaginella moellendorffii (2 genes)
Sequoiadendron giganteum (2 genes)
Setaria italica (2 genes)
Setaria viridis (3 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (4 genes)
Triticum dicoccoides (2 genes)
Triticum turgidum (2 genes)
Vanilla planifolia (1 genes)
Zea mays B73 (1 genes)
Zea mays B104 (2 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (3 genes)

Program Settings