Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
OsKitaake11g006100 Oryza sativa Kitaake HOM05M003265 ORTHO05M003799 1.2e-45 185.3 90 100.0
OsR498G1119313900.01 Oryza sativa ssp. indica HOM05M003265 ORTHO05M003799 1.2e-45 185.3 90 100.0
Os11g0113300 Oryza sativa ssp. japonica HOM05M003265 ORTHO05M003799 1.2e-45 185.3 90 100.0
OsR498G1220819900.01 Oryza sativa ssp. indica HOM05M003265 ORTHO05M003799 8.3e-42 172.6 93 95.7
OsKitaake12g009800 Oryza sativa Kitaake HOM05M003265 ORTHO05M003799 2.4e-41 171.0 93 94.6
Os12g0112800 Oryza sativa ssp. japonica HOM05M003265 ORTHO05M003799 1.2e-40 168.7 90 95.6
OB11G10560 Oryza brachyantha HOM05M003265 ORTHO05M003799 7.8e-40 166.0 90 92.2
OB12G10810 Oryza brachyantha HOM05M003265 ORTHO05M003799 7.8e-40 166.0 90 92.2
PH02Gene38253 Phyllostachys edulis HOM05M003265 ORTHO05M003799 2.2e-34 147.9 93 80.6
Zjn_sc00038.1.g00030.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM05M003265 ORTHO05M003799 2.4e-33 144.4 90 80.0
Dexi3A01G0000710 Digitaria exilis HOM05M003265 ORTHO05M003799 4.1e-33 143.7 92 79.3
EJB05_29946 Eragrostis curvula HOM05M003265 ORTHO05M003799 4.1e-33 143.7 93 77.4
EJB05_29962 Eragrostis curvula HOM05M003265 ORTHO05M003799 4.1e-33 143.7 93 77.4
Zjn_sc00028.1.g04030.1.sm.mk Zoysia japonica ssp. nagirizaki HOM05M003265 ORTHO05M003799 5.4e-33 143.3 90 80.0
Sobic.008G032100 Sorghum bicolor HOM05M003265 ORTHO05M003799 9.2e-33 142.5 90 80.0
Sspon.07G0018210-3D Saccharum spontaneum HOM05M003265 ORTHO05M003799 1.2e-32 142.1 90 80.0
GWHGAORA010807 Cenchrus purpureus HOM05M003265 ORTHO05M003799 2.1e-32 141.4 91 79.1
Seita.7G300200 Setaria italica HOM05M003265 ORTHO05M003799 2.1e-32 141.4 92 79.3
Sevir.7G311900 Setaria viridis HOM05M003265 ORTHO05M003799 2.1e-32 141.4 92 79.3
Dexi3B01G0000810 Digitaria exilis HOM05M003265 ORTHO05M003799 2.7e-32 141.0 90 80.0
PH02Gene17520 Phyllostachys edulis HOM05M003265 ORTHO05M003799 2.7e-32 141.0 90 80.0
Misin15G043900 Miscanthus sinensis HOM05M003265 ORTHO05M003799 3.5e-32 140.6 90 78.9
Ot_Chr2_gn32820 Oropetium thomaeum HOM05M003265 ORTHO05M003799 3.5e-32 140.6 91 78.0
Seita.8G014500 Setaria italica HOM05M003265 ORTHO05M003799 3.5e-32 140.6 92 78.3
Sevir.8G013300 Setaria viridis HOM05M003265 ORTHO05M003799 3.5e-32 140.6 92 78.3
Misin14G041800 Miscanthus sinensis HOM05M003265 ORTHO05M003799 4.6e-32 140.2 91 79.1
Sspon.07G0018210-1A Saccharum spontaneum HOM05M003265 ORTHO05M003799 6.0e-32 139.8 89 78.7
Zm00001eb406300 Zea mays B73 HOM05M003265 ORTHO05M003799 7.8e-32 139.4 91 75.8
PH02Gene35867 Phyllostachys edulis HOM05M003265 ORTHO05M003799 2.3e-31 137.9 91 76.9
Horvu_MOREX_5H01G255900 Hordeum vulgare HOM05M003265 ORTHO05M003799 3.0e-31 137.5 91 76.9
MisinT044000 Miscanthus sinensis HOM05M003265 ORTHO05M003799 3.0e-31 137.5 92 77.2
TraesCS5D03G0361700 Triticum aestivum HOM05M003265 ORTHO05M003799 3.0e-31 137.5 91 76.9
Sspon.07G0018210-2C Saccharum spontaneum HOM05M003265 ORTHO05M003799 5.1e-31 136.7 90 77.8
TraesCS5A03G0410300 Triticum aestivum HOM05M003265 ORTHO05M003799 5.1e-31 136.7 89 77.5
TRIDC5AG024840 Triticum dicoccoides HOM05M003265 ORTHO05M003799 5.1e-31 136.7 89 77.5
TRITD5Av1G112440 Triticum turgidum HOM05M003265 ORTHO05M003799 5.1e-31 136.7 89 77.5
Pahal.8G007400 Panicum hallii HOM05M003265 ORTHO05M003799 6.6e-31 136.3 92 77.2
GWHGAORA023557 Cenchrus purpureus HOM05M003265 ORTHO05M003799 8.6e-31 136.0 91 78.0
Pahal.3G006600 Panicum hallii HOM05M003265 ORTHO05M003799 8.6e-31 136.0 92 76.1
GWHGASIY025498 Secale cereale HOM05M003265 ORTHO05M003799 8.6e-31 136.0 91 75.8
TraesCS4B03G0275600 Triticum aestivum HOM05M003265 ORTHO05M003799 8.6e-31 136.0 103 68.9
TRIDC4BG018580 Triticum dicoccoides HOM05M003265 ORTHO05M003799 8.6e-31 136.0 103 68.9
TRITD4Bv1G049070 Triticum turgidum HOM05M003265 ORTHO05M003799 8.6e-31 136.0 103 68.9
Misin10G197900 Miscanthus sinensis HOM05M003265 ORTHO05M003799 1.5e-30 135.2 90 74.4
GWHGASIY019326 Secale cereale HOM05M003265 ORTHO05M003799 1.5e-30 135.2 103 68.9
Horvu_MOREX_4H01G150800 Hordeum vulgare HOM05M003265 ORTHO05M003799 4.3e-30 133.7 101 72.3
TraesCS4A03G0522400 Triticum aestivum HOM05M003265 ORTHO05M003799 1.2e-29 132.1 103 68.0
TRIDC4AG031110 Triticum dicoccoides HOM05M003265 ORTHO05M003799 1.2e-29 132.1 103 68.0
GWHGAORA056775 Cenchrus purpureus HOM05M003265 ORTHO05M003799 2.1e-29 131.3 91 75.8
AET4Gv20254400 Aegilops tauschii HOM05M003265 ORTHO05M003799 3.6e-29 130.6 103 67.0
Sspon.05G0021220-1P Saccharum spontaneum HOM05M003265 ORTHO05M003799 3.6e-29 130.6 95 70.5
TraesCS4D03G0237000 Triticum aestivum HOM05M003265 ORTHO05M003799 3.6e-29 130.6 103 67.0
Zm00007a00019815 Zea mays B104 HOM05M003265 ORTHO05M003799 4.7e-29 130.2 92 70.7
TraesCS5B03G0407300 Triticum aestivum HOM05M003265 ORTHO05M003799 6.2e-29 129.8 91 73.6
TRIDC5BG026080 Triticum dicoccoides HOM05M003265 ORTHO05M003799 6.2e-29 129.8 91 73.6
Sspon.05G0021220-1A Saccharum spontaneum HOM05M003265 ORTHO05M003799 1.4e-28 128.6 95 69.5
V3.Lp_chr5_0G8802 Lolium perenne HOM05M003265 ORTHO05M003799 2.4e-28 127.9 91 73.6
Bradi4g25630 Brachypodium distachyon HOM05M003265 ORTHO05M003799 3.1e-28 127.5 95 73.7
TRITD4Av1G152660 Triticum turgidum HOM05M003265 ORTHO05M003799 5.2e-28 126.7 91 71.4
Zm00001eb163950 Zea mays B73 HOM05M003265 ORTHO05M003799 2.0e-27 124.8 87 71.3
Zm00007a00023877 Zea mays B104 HOM05M003265 ORTHO05M003799 2.0e-27 124.8 87 71.3
Bradi4g44470 Brachypodium distachyon HOM05M003265 ORTHO05M003799 2.9e-26 120.9 94 69.1
Ma11_g18180 Musa acuminata HOM05M003265 ORTHO05M003799 2.8e-21 104.4 86 57.0
Ma04_g00180 Musa acuminata HOM05M003265 ORTHO05M003799 3.6e-21 104.0 88 55.7
evm.TU.AsparagusV1_02.426.V1.1 Asparagus officinalis HOM05M003265 ORTHO05M003799 2.6e-19 97.8 85 58.8
Ma06_g01070 Musa acuminata HOM05M003265 ORTHO05M003799 1.3e-18 95.5 79 57.0
CALSI_Maker00011536 Calamus simplicifolius HOM05M003265 ORTHO05M003799 1.4e-17 92.0 88 53.4
Ma07_g23650 Musa acuminata HOM05M003265 ORTHO05M003799 5.4e-17 90.1 79 57.0
HPP92_015429 Vanilla planifolia HOM05M003265 ORTHO05M003799 7.1e-17 89.7 76 59.2
DDU232G0017 Dioscorea dumetorum HOM05M003265 ORTHO05M003799 2.7e-16 87.8 83 57.8
DDU272G0083 Dioscorea dumetorum HOM05M003265 ORTHO05M003799 2.7e-16 87.8 83 57.8
DDU324G0006 Dioscorea dumetorum HOM05M003265 ORTHO05M003799 2.7e-16 87.8 91 50.5
Asa7G07106 Allium sativum HOM05M003265 ORTHO05M003799 4.6e-16 87.0 82 51.2
MBI15_g31429_MAGBIO Magnolia biondii HOM05M003265 ORTHO05M003799 1.3e-15 85.5 83 51.8
CDE07G1433 Ceratophyllum demersum HOM05M003265 ORTHO05M003799 3.0e-15 84.3 78 52.6
AT5G58375 Arabidopsis thaliana HOM05M003265 ORTHO05M003799 3.9e-15 84.0 79 55.7
Glyma.18G054800 Glycine max HOM05M003265 ORTHO05M003799 3.9e-15 84.0 87 51.7
CDE04G3004 Ceratophyllum demersum HOM05M003265 ORTHO05M003799 6.7e-15 83.2 78 51.3
Spipo29G0014400 Spirodela polyrhiza HOM05M003265 ORTHO05M003799 3.3e-14 80.9 93 47.3
Glyma.11G161000 Glycine max HOM05M003265 ORTHO05M003799 5.6e-14 80.1 87 50.6
Potri.013G155800 Populus trichocarpa HOM05M003265 ORTHO05M003799 9.6e-14 79.3 89 49.4
ATR0737G176 Amborella trichopoda HOM05M003265 ORTHO05M003799 1.1e-12 75.9 76 50.0
Glyma.02G234900 Glycine max HOM05M003265 ORTHO05M003799 1.1e-12 75.9 92 45.7
Zjn_sc00199.1.g00010.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M003265 ORTHO05M003799 1.1e-12 75.9 52 78.8
AET5Gv20381800 Aegilops tauschii HOM05M003265 ORTHO05M003799 1.8e-12 75.1 53 77.4
Glyma.14G202800 Glycine max HOM05M003265 ORTHO05M003799 2.4e-12 74.7 90 45.6
Zosma03g31170 Zostera marina HOM05M003265 ORTHO05M003799 1.2e-11 72.4 87 47.1
SEGI_12704 Sequoiadendron giganteum HOM05M003265 ORTHO05M003799 1.5e-11 72.0 88 45.5
Zosma02g22060 Zostera marina HOM05M003265 ORTHO05M003799 2.6e-11 71.2 113 36.3
Potri.019G127900 Populus trichocarpa HOM05M003265 ORTHO05M003799 7.6e-11 69.7 90 45.6
Ma10_g17630 Musa acuminata HOM05M003265 ORTHO05M003799 3.8e-10 67.4 79 40.5
Zjn_sc00031.1.g00380.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M003265 ORTHO05M003799 3.8e-10 67.4 63 58.7
AT5G14602 Arabidopsis thaliana HOM05M003265 ORTHO05M003799 1.1e-09 65.9 76 42.1
SEGI_01199 Sequoiadendron giganteum HOM05M003265 ORTHO05M003799 1.1e-09 65.9 80 46.2
evm.TU.AsparagusV1_07.3640.V1.1 Asparagus officinalis HOM05M003265 ORTHO05M003799 1.4e-09 65.5 78 43.6
Potri.019G035000 Populus trichocarpa HOM05M003265 ORTHO05M003799 1.9e-09 65.1 78 42.3
Mapoly0027s0077 Marchantia polymorpha HOM05M003265 ORTHO05M003799 3.2e-09 64.3 89 38.2
Ma06_g13050 Musa acuminata HOM05M003265 ORTHO05M003799 4.2e-09 63.9 79 36.7
Potri.013G058200 Populus trichocarpa HOM05M003265 ORTHO05M003799 7.1e-09 63.2 77 42.9
AT5G18150 Arabidopsis thaliana HOM05M003265 ORTHO05M003799 9.3e-09 62.8 76 39.5
Solyc06g075190.1 Solanum lycopersicum HOM05M003265 ORTHO05M003799 1.2e-08 62.4 88 43.2
MBI04_g38345_MAGBIO Magnolia biondii HOM05M003265 ORTHO05M003799 2.1e-08 61.6 81 39.5
Glyma.16G153500 Glycine max HOM05M003265 ORTHO05M003799 3.5e-08 60.8 90 38.9
CDE02G4642 Ceratophyllum demersum HOM05M003265 ORTHO05M003799 4.6e-08 60.5 76 42.1
p5.00_sc00004_p0268 Elaeis guineensis HOM05M003265 ORTHO05M003799 6.0e-08 60.1 88 38.6
Glyma.02G072300 Glycine max HOM05M003265 ORTHO05M003799 6.0e-08 60.1 78 39.7
CDE02G2185 Ceratophyllum demersum HOM05M003265 ORTHO05M003799 7.9e-08 59.7 76 39.5
CALSI_Maker00037780 Calamus simplicifolius HOM05M003265 ORTHO05M003799 1.3e-07 58.9 79 39.2
Pp3c8_19160 Physcomitrium patens HOM05M003265 ORTHO05M003799 1.8e-07 58.5 79 39.2
Spipo2G0029000 Spirodela polyrhiza HOM05M003265 ORTHO05M003799 1.8e-07 58.5 76 42.1
evm.TU.AsparagusV1_06.423.V1.1 Asparagus officinalis HOM05M003265 ORTHO05M003799 3.9e-07 57.4 76 42.1
SEGI_06891 Sequoiadendron giganteum HOM05M003265 ORTHO05M003799 1.9e-06 55.1 77 44.2
Glyma.16G041100 Glycine max HOM05M003265 ORTHO05M003799 3.3e-06 54.3 78 37.2
Glyma.19G112000 Glycine max HOM05M003265 ORTHO05M003799 7.4e-06 53.1 78 34.6

Aegilops tauschii (2 genes)
Allium sativum (1 genes)
Amborella trichopoda (1 genes)
Ananas comosus (0 genes)
Anthoceros agrestis (0 genes)
Arabidopsis thaliana (3 genes)
Asparagus officinalis (3 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (2 genes)
Cenchrus purpureus (3 genes)
Ceratophyllum demersum (4 genes)
Chara braunii (0 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (2 genes)
Dioscorea dumetorum (3 genes)
Elaeis guineensis (1 genes)
Eragrostis curvula (2 genes)
Glycine max (8 genes)
Hordeum vulgare (2 genes)
Lolium perenne (1 genes)
Magnolia biondii (2 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (4 genes)
Musa acuminata (6 genes)
Oropetium thomaeum (1 genes)
Oryza alta (0 genes)
Oryza brachyantha (2 genes)
Oryza sativa Kitaake (2 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (2 genes)
Panicum hallii (2 genes)
Phyllostachys edulis (3 genes)
Physcomitrium patens (1 genes)
Populus trichocarpa (4 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (5 genes)
Secale cereale (2 genes)
Selaginella moellendorffii (0 genes)
Sequoiadendron giganteum (3 genes)
Setaria italica (2 genes)
Setaria viridis (2 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (6 genes)
Triticum dicoccoides (4 genes)
Triticum turgidum (3 genes)
Vanilla planifolia (1 genes)
Zea mays B73 (2 genes)
Zea mays B104 (2 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (4 genes)

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