Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0103400 Oryza sativa ssp. japonica HOM05M000417 ORTHO05M003013 4.4e-228 793.5 400 100.0
OsKitaake12g002200 Oryza sativa Kitaake HOM05M000417 ORTHO05M003013 5.8e-196 686.8 358 96.1
Os12g0102900 Oryza sativa ssp. japonica HOM05M000417 ORTHO05M003013 5.8e-196 686.8 358 96.1
GWHGAZTO010067 Oryza alta HOM05M000417 ORTHO05M003013 2.9e-147 525.0 307 89.6
GWHGAZTO013275 Oryza alta HOM05M000417 ORTHO05M003013 1.3e-131 473.0 287 86.4
PH02Gene18936 Phyllostachys edulis HOM05M000417 ORTHO05M003013 2.1e-116 422.5 336 66.4
PH02Gene13658 Phyllostachys edulis HOM05M000417 ORTHO05M003013 1.8e-112 409.5 336 64.3
EJB05_02638 Eragrostis curvula HOM05M000417 ORTHO05M003013 4.4e-111 404.8 301 68.8
EJB05_02626 Eragrostis curvula HOM05M000417 ORTHO05M003013 9.9e-111 403.7 301 68.4
V3.Lp_chr5_0G9366 Lolium perenne HOM05M000417 ORTHO05M003013 9.9e-111 403.7 292 69.9
Pahal.5G430500 Panicum hallii HOM05M000417 ORTHO05M003013 2.2e-110 402.5 303 67.0
Pahal.5G255900 Panicum hallii HOM05M000417 ORTHO05M003013 4.9e-110 401.4 301 67.8
Bradi4g45200 Brachypodium distachyon HOM05M000417 ORTHO05M003013 8.4e-110 400.6 295 67.8
GWHGASIY025588 Secale cereale HOM05M000417 ORTHO05M003013 1.9e-109 399.4 296 68.6
TraesCS5A03G0425100 Triticum aestivum HOM05M000417 ORTHO05M003013 7.1e-109 397.5 294 68.7
TRITD5Av1G115920 Triticum turgidum HOM05M000417 ORTHO05M003013 7.1e-109 397.5 294 68.7
TraesCS5B03G0420600 Triticum aestivum HOM05M000417 ORTHO05M003013 1.2e-108 396.7 294 69.0
TRITD5Bv1G096840 Triticum turgidum HOM05M000417 ORTHO05M003013 1.2e-108 396.7 294 69.0
TraesCS5D03G0393600 Triticum aestivum HOM05M000417 ORTHO05M003013 7.8e-108 394.0 294 68.4
AET5Gv20395400 Aegilops tauschii HOM05M000417 ORTHO05M003013 3.0e-107 392.1 294 68.0
Ot_Chr2_gn32680 Oropetium thomaeum HOM05M000417 ORTHO05M003013 1.5e-106 389.8 301 65.8
Dexi5B01G0011480 Digitaria exilis HOM05M000417 ORTHO05M003013 1.3e-105 386.7 300 65.3
EJB05_30153 Eragrostis curvula HOM05M000417 ORTHO05M003013 1.1e-104 383.6 299 65.6
GWHGAORA033153 Cenchrus purpureus HOM05M000417 ORTHO05M003013 4.0e-104 381.7 306 64.4
TraesCS5A03G0425200 Triticum aestivum HOM05M000417 ORTHO05M003013 2.0e-103 379.4 299 64.5
TRITD5Av1G115930 Triticum turgidum HOM05M000417 ORTHO05M003013 2.0e-103 379.4 299 64.5
EJB05_53205 Eragrostis curvula HOM05M000417 ORTHO05M003013 4.4e-103 378.3 297 64.6
TraesCS5B03G0421300 Triticum aestivum HOM05M000417 ORTHO05M003013 7.6e-103 377.5 296 64.2
TRITD5Bv1G096760 Triticum turgidum HOM05M000417 ORTHO05M003013 7.6e-103 377.5 296 64.2
EJB05_30079 Eragrostis curvula HOM05M000417 ORTHO05M003013 9.9e-103 377.1 299 64.2
GWHGASIY025589 Secale cereale HOM05M000417 ORTHO05M003013 1.1e-101 373.6 299 63.5
AET5Gv20395800 Aegilops tauschii HOM05M000417 ORTHO05M003013 9.3e-101 370.5 299 63.9
TraesCS5D03G0393800 Triticum aestivum HOM05M000417 ORTHO05M003013 9.3e-101 370.5 299 63.9
GWHGAORA041811 Cenchrus purpureus HOM05M000417 ORTHO05M003013 1.2e-100 370.2 336 59.2
TRIDC5BG026960 Triticum dicoccoides HOM05M000417 ORTHO05M003013 8.7e-99 364.0 274 67.2
Bradi2g18110 Brachypodium distachyon HOM05M000417 ORTHO05M003013 2.5e-98 362.5 302 63.9
Sspon.05G0021670-2P Saccharum spontaneum HOM05M000417 ORTHO05M003013 3.3e-98 362.1 298 62.4
Sobic.005G001600 Sorghum bicolor HOM05M000417 ORTHO05M003013 4.3e-98 361.7 298 62.8
Sspon.05G0021670-2B Saccharum spontaneum HOM05M000417 ORTHO05M003013 2.1e-97 359.4 298 62.1
GWHGAORA038781 Cenchrus purpureus HOM05M000417 ORTHO05M003013 1.1e-96 357.1 303 61.4
Seita.3G152200 Setaria italica HOM05M000417 ORTHO05M003013 1.7e-94 349.7 292 62.0
Sevir.3G155000 Setaria viridis HOM05M000417 ORTHO05M003013 1.7e-94 349.7 292 62.0
Zm00007a00014480 Zea mays B104 HOM05M000417 ORTHO05M003013 2.7e-92 342.4 296 60.5
Zm00001eb194870 Zea mays B73 HOM05M000417 ORTHO05M003013 5.1e-91 338.2 296 60.1
Sspon.05G0021670-3C Saccharum spontaneum HOM05M000417 ORTHO05M003013 3.3e-90 335.5 325 56.0
Ot_Chr2_g22219 Oropetium thomaeum HOM05M000417 ORTHO05M003013 1.2e-87 327.0 293 60.1
Zjn_sc00097.1.g00800.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M000417 ORTHO05M003013 1.0e-86 323.9 298 60.1
OsR498G1119279500.01 Oryza sativa ssp. indica HOM05M000417 ORTHO05M003013 2.9e-86 322.4 164 99.4
GWHGAORA017263 Cenchrus purpureus HOM05M000417 ORTHO05M003013 6.5e-86 321.2 247 61.9
GWHGAZTO065282 Oryza alta HOM05M000417 ORTHO05M003013 8.4e-78 294.3 158 92.4
GWHGAORA003838 Cenchrus purpureus HOM05M000417 ORTHO05M003013 7.1e-77 291.2 346 51.7
Misin19G050600 Miscanthus sinensis HOM05M000417 ORTHO05M003013 1.3e-75 287.0 305 53.8
Sevir.5G058500 Setaria viridis HOM05M000417 ORTHO05M003013 2.8e-73 279.3 341 48.7
TRITD7Av1G055180 Triticum turgidum HOM05M000417 ORTHO05M003013 1.1e-72 277.3 297 52.5
V3.Lp_chr7_0.1G2006 Lolium perenne HOM05M000417 ORTHO05M003013 1.8e-72 276.6 329 50.8
GWHGASIY018762 Secale cereale HOM05M000417 ORTHO05M003013 6.9e-72 274.6 291 51.2
AET7Gv20449700 Aegilops tauschii HOM05M000417 ORTHO05M003013 1.7e-70 270.0 284 52.5
EJB05_51715 Eragrostis curvula HOM05M000417 ORTHO05M003013 5.0e-70 268.5 209 62.7
GWHGASIY021055 Secale cereale HOM05M000417 ORTHO05M003013 4.6e-68 261.9 298 52.0
TraesCS7D03G0392500 Triticum aestivum HOM05M000417 ORTHO05M003013 2.0e-66 256.5 301 49.5
Sspon.07G0016590-1A Saccharum spontaneum HOM05M000417 ORTHO05M003013 3.4e-63 245.7 287 50.9
Aco012460 Ananas comosus HOM05M000417 ORTHO05M003013 2.9e-62 242.7 297 44.1
Sspon.07G0016590-2B Saccharum spontaneum HOM05M000417 ORTHO05M003013 1.1e-61 240.7 287 50.2
GWHGAORA041820 Cenchrus purpureus HOM05M000417 ORTHO05M003013 4.2e-61 238.8 332 46.7
p5.00_sc00003_p0160 Elaeis guineensis HOM05M000417 ORTHO05M003013 2.3e-59 233.0 290 41.7
Dexi5A01G0011190 Digitaria exilis HOM05M000417 ORTHO05M003013 6.7e-59 231.5 184 66.3
Spipo29G0019300 Spirodela polyrhiza HOM05M000417 ORTHO05M003013 1.7e-57 226.9 306 40.8
Ma10_g03370 Musa acuminata HOM05M000417 ORTHO05M003013 2.2e-57 226.5 289 42.6
GWHGAORA017246 Cenchrus purpureus HOM05M000417 ORTHO05M003013 1.2e-55 220.7 309 44.3
DDU174G0040 Dioscorea dumetorum HOM05M000417 ORTHO05M003013 1.2e-55 220.7 295 41.7
DDU550G0071 Dioscorea dumetorum HOM05M000417 ORTHO05M003013 1.0e-54 217.6 295 41.4
MBI14_g39106_MAGBIO Magnolia biondii HOM05M000417 ORTHO05M003013 2.9e-54 216.1 303 37.0
PH02Gene36623 Phyllostachys edulis HOM05M000417 ORTHO05M003013 4.2e-53 212.2 173 64.7
HPP92_015574 Vanilla planifolia HOM05M000417 ORTHO05M003013 2.1e-52 209.9 303 41.3
Sspon.05G0021670-1A Saccharum spontaneum HOM05M000417 ORTHO05M003013 2.6e-50 203.0 203 53.7
ATR1159G022 Amborella trichopoda HOM05M000417 ORTHO05M003013 2.8e-49 199.5 292 38.0
evm.TU.AsparagusV1_07.383.V1.1 Asparagus officinalis HOM05M000417 ORTHO05M003013 7.0e-48 194.9 236 42.4
Zm00007a00036176 Zea mays B104 HOM05M000417 ORTHO05M003013 1.7e-46 190.3 228 46.1
CALSI_Maker00020794 Calamus simplicifolius HOM05M000417 ORTHO05M003013 5.0e-46 188.7 189 45.5
TRITD7Bv1G030900 Triticum turgidum HOM05M000417 ORTHO05M003013 8.5e-46 188.0 163 58.3
Misin14G001300 Miscanthus sinensis HOM05M000417 ORTHO05M003013 1.2e-44 184.1 220 47.3
GWHGAORA043163 Cenchrus purpureus HOM05M000417 ORTHO05M003013 3.6e-44 182.6 233 47.2
Sspon.05G0021670-1P Saccharum spontaneum HOM05M000417 ORTHO05M003013 1.0e-43 181.0 126 65.9
Glyma.11G152542 Glycine max HOM05M000417 ORTHO05M003013 5.7e-42 175.3 290 35.2
Potri.009G150100 Populus trichocarpa HOM05M000417 ORTHO05M003013 2.2e-41 173.3 316 31.6
Glyma.12G071900 Glycine max HOM05M000417 ORTHO05M003013 3.7e-41 172.6 254 36.6
Potri.006G104700 Populus trichocarpa HOM05M000417 ORTHO05M003013 4.8e-41 172.2 281 34.9
Zosma06g21390 Zostera marina HOM05M000417 ORTHO05M003013 1.4e-40 170.6 310 33.2
EJB05_30082 Eragrostis curvula HOM05M000417 ORTHO05M003013 7.0e-40 168.3 213 49.3
TRIDC5AG025830 Triticum dicoccoides HOM05M000417 ORTHO05M003013 9.1e-40 167.9 114 68.4
SEGI_38593 Sequoiadendron giganteum HOM05M000417 ORTHO05M003013 1.2e-39 167.5 299 31.4
Asa7G02206 Allium sativum HOM05M000417 ORTHO05M003013 3.8e-38 162.5 295 35.6
Asa7G03219 Allium sativum HOM05M000417 ORTHO05M003013 5.0e-38 162.2 295 35.6
Solyc06g005000.3 Solanum lycopersicum HOM05M000417 ORTHO05M003013 3.2e-37 159.5 269 35.3
EJB05_50040 Eragrostis curvula HOM05M000417 ORTHO05M003013 8.0e-36 154.8 134 55.2
GWHGAZTO065281 Oryza alta HOM05M000417 ORTHO05M003013 4.9e-33 145.6 127 68.5
Zjn_sc00028.1.g04530.1.am.mk Zoysia japonica ssp. nagirizaki HOM05M000417 ORTHO05M003013 6.3e-33 145.2 176 51.1
MisinT054600 Miscanthus sinensis HOM05M000417 ORTHO05M003013 2.0e-31 140.2 219 39.3
Sobic.002G126100 Sorghum bicolor HOM05M000417 ORTHO05M003013 1.7e-30 137.1 108 59.3
AT5G60250 Arabidopsis thaliana HOM05M000417 ORTHO05M003013 2.3e-30 136.7 217 35.9
Dexi4B01G0006480 Digitaria exilis HOM05M000417 ORTHO05M003013 6.6e-30 135.2 120 58.3
MisinT103600 Miscanthus sinensis HOM05M000417 ORTHO05M003013 4.2e-29 132.5 177 45.2
Dexi4A01G0004390 Digitaria exilis HOM05M000417 ORTHO05M003013 8.6e-22 108.2 190 41.1
AT5G37560 Arabidopsis thaliana HOM05M000417 ORTHO05M003013 3.6e-20 102.8 211 29.9
EJB05_30080 Eragrostis curvula HOM05M000417 ORTHO05M003013 8.9e-19 98.2 50 86.0
Mapoly0010s0070 Marchantia polymorpha HOM05M000417 ORTHO05M000629 1.2e-18 97.8 292 24.3
MisinT054500 Miscanthus sinensis HOM05M000417 ORTHO05M003013 7.5e-18 95.1 50 80.0
AT2G25360 Arabidopsis thaliana HOM05M000417 ORTHO05M003013 4.9e-17 92.4 153 35.3
AT2G26130 Arabidopsis thaliana HOM05M000417 ORTHO05M003013 6.4e-17 92.0 225 26.7
AT3G45480 Arabidopsis thaliana HOM05M000417 ORTHO05M003013 1.4e-16 90.9 155 32.9
EJB05_51714 Eragrostis curvula HOM05M005735 ORTHO05M014899 3.2e-16 89.7 58 74.1
AT3G43750 Arabidopsis thaliana HOM05M000417 ORTHO05M003013 2.7e-15 86.7 220 25.0
EJB05_53216 Eragrostis curvula HOM05M000417 ORTHO05M003013 4.6e-15 85.9 54 77.8
AT3G45560 Arabidopsis thaliana HOM05M000417 ORTHO05M003013 2.3e-14 83.6 210 26.2
AT3G45580 Arabidopsis thaliana HOM05M000417 ORTHO05M003013 8.6e-14 81.6 216 26.9
AT2G25370 Arabidopsis thaliana HOM05M000417 ORTHO05M003013 1.5e-13 80.9 212 27.8
Pp3c8_11630 Physcomitrium patens HOM05M000417 ORTHO05M003013 1.5e-13 80.9 201 26.4
AT3G45570 Arabidopsis thaliana HOM05M000417 ORTHO05M003013 1.9e-13 80.5 215 25.6
AT2G21420 Arabidopsis thaliana HOM05M000417 ORTHO05M003013 4.3e-13 79.3 211 25.1
EJB05_51718 Eragrostis curvula HOM05M000417 ORTHO05M110357 2.8e-12 76.6 72 58.3
EJB05_53207 Eragrostis curvula HOM05M000417 ORTHO05M003013 8.1e-12 75.1 72 56.9
Bradi4g00980 Brachypodium distachyon HOM05M000417 ORTHO05M009158 2.3e-11 73.6 215 27.4
AT2G19610 Arabidopsis thaliana HOM05M000417 ORTHO05M003013 6.8e-11 72.0 275 23.6
TraesCS5A03G0037900 Triticum aestivum HOM05M000417 ORTHO05M009158 1.5e-10 70.9 237 26.2
TRIDC5AG002400 Triticum dicoccoides HOM05M000417 ORTHO05M009158 1.5e-10 70.9 237 26.2
TRITD5Av1G006400 Triticum turgidum HOM05M000417 ORTHO05M009158 1.5e-10 70.9 237 26.2
AT3G45460 Arabidopsis thaliana HOM05M000417 ORTHO05M003013 2.6e-10 70.1 155 26.5
ATR0763G142 Amborella trichopoda HOM05M000417 ORTHO05M009158 3.4e-10 69.7 247 23.5
AagrBONN_evm.TU.Sc2ySwM_344.4279 Anthoceros agrestis HOM05M000417 ORTHO05M000629 3.4e-10 69.7 294 21.4
AET5Gv20044900 Aegilops tauschii HOM05M000417 ORTHO05M009158 4.4e-10 69.3 237 26.2
TraesCS5D03G0049100 Triticum aestivum HOM05M000417 ORTHO05M009158 4.4e-10 69.3 237 26.2
GWHGASIY024085 Secale cereale HOM05M000417 ORTHO05M009158 9.8e-10 68.2 267 24.7
TraesCS5B03G0030600 Triticum aestivum HOM05M000417 ORTHO05M009158 9.8e-10 68.2 237 25.7
TRIDC5BG002230 Triticum dicoccoides HOM05M000417 ORTHO05M009158 9.8e-10 68.2 237 25.7
TRITD5Bv1G005300 Triticum turgidum HOM05M000417 ORTHO05M009158 9.8e-10 68.2 237 25.7
PH02Gene18028 Phyllostachys edulis HOM05M000417 ORTHO05M009158 2.2e-09 67.0 222 26.1
AT3G45540 Arabidopsis thaliana HOM05M000417 ORTHO05M003013 2.9e-09 66.6 123 29.3
Ma09_g26810 Musa acuminata HOM05M000417 ORTHO05M009158 1.9e-08 63.9 207 26.1
CALSI_Maker00034004 Calamus simplicifolius HOM05M000417 ORTHO05M009158 5.4e-08 62.4 206 26.2
Potri.015G117600 Populus trichocarpa HOM05M000417 ORTHO05M009158 7.1e-08 62.0 209 26.3
OsR498G1220790100.01 Oryza sativa ssp. indica HOM05M000417 ORTHO05M003013 1.6e-07 60.8 32 84.4
AT3G43180 Arabidopsis thaliana HOM05M000417 ORTHO05M003013 4.6e-07 59.3 82 34.1
EJB05_00102 Eragrostis curvula HOM05M000417 ORTHO05M009158 6.0e-07 58.9 285 23.2
AT3G45470 Arabidopsis thaliana HOM05M000417 ORTHO05M003013 1.0e-06 58.2 58 39.7
SMO330G0011 Selaginella moellendorffii HOM05M000417 ORTHO05M003013 1.0e-06 58.2 61 42.6
SMO147G0125 Selaginella moellendorffii HOM05M000417 ORTHO05M003013 2.3e-06 57.0 61 42.6
SMO147G0272 Selaginella moellendorffii HOM05M000417 ORTHO05M000629 2.3e-06 57.0 61 42.6
GWHGAZTO051387 Oryza alta HOM05M000417 ORTHO05M000629 3.0e-06 56.6 63 38.1
OsR498G0917469500.01 Oryza sativa ssp. indica HOM05M000417 ORTHO05M000629 5.1e-06 55.8 63 36.5
OsKitaake09g101300 Oryza sativa Kitaake HOM05M000417 ORTHO05M000629 8.6e-06 55.1 63 36.5
Os09g0419500 Oryza sativa ssp. japonica HOM05M000417 ORTHO05M000629 8.6e-06 55.1 63 36.5
TraesCS5A03G0575200 Triticum aestivum HOM05M000417 ORTHO05M000629 8.6e-06 55.1 50 40.0
TRITD5Av1G143100 Triticum turgidum HOM05M000417 ORTHO05M000629 8.6e-06 55.1 50 40.0

Aegilops tauschii (4 genes)
Allium sativum (2 genes)
Amborella trichopoda (2 genes)
Ananas comosus (1 genes)
Anthoceros agrestis (1 genes)
Arabidopsis thaliana (16 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (2 genes)
Cenchrus purpureus (8 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chlamydomonas reinhardtii (0 genes)
Digitaria exilis (4 genes)
Dioscorea dumetorum (2 genes)
Elaeis guineensis (1 genes)
Eragrostis curvula (14 genes)
Glycine max (2 genes)
Hordeum vulgare (0 genes)
Lolium perenne (2 genes)
Magnolia biondii (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (5 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (2 genes)
Oryza alta (5 genes)
Oryza brachyantha (0 genes)
Oryza sativa Kitaake (2 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (3 genes)
Panicum hallii (2 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (1 genes)
Populus trichocarpa (3 genes)
Prasinoderma coloniale (0 genes)
Saccharum spontaneum (7 genes)
Secale cereale (5 genes)
Selaginella moellendorffii (3 genes)
Sequoiadendron giganteum (1 genes)
Setaria italica (1 genes)
Setaria viridis (2 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (11 genes)
Triticum dicoccoides (4 genes)
Triticum turgidum (9 genes)
Vanilla planifolia (1 genes)
Zea mays B73 (1 genes)
Zea mays B104 (2 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings