Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MisinT103600 Miscanthus sinensis HOM05M000417 ORTHO05M003013 2.0e-198 694.9 338 100.0
MisinT054600 Miscanthus sinensis HOM05M000417 ORTHO05M003013 1.5e-79 300.1 284 62.7
Zm00007a00036176 Zea mays B104 HOM05M000417 ORTHO05M003013 1.0e-69 267.3 335 49.9
Misin14G001300 Miscanthus sinensis HOM05M000417 ORTHO05M003013 9.1e-66 254.2 262 57.3
PH02Gene18936 Phyllostachys edulis HOM05M000417 ORTHO05M003013 1.8e-58 229.9 328 43.3
EJB05_02626 Eragrostis curvula HOM05M000417 ORTHO05M003013 2.7e-57 226.1 328 43.3
EJB05_02638 Eragrostis curvula HOM05M000417 ORTHO05M003013 5.9e-57 224.9 328 43.0
EJB05_53205 Eragrostis curvula HOM05M000417 ORTHO05M003013 7.7e-57 224.6 327 42.5
GWHGAORA041811 Cenchrus purpureus HOM05M000417 ORTHO05M003013 1.0e-56 224.2 329 45.0
EJB05_30153 Eragrostis curvula HOM05M000417 ORTHO05M003013 1.3e-56 223.8 327 42.5
EJB05_30079 Eragrostis curvula HOM05M000417 ORTHO05M003013 1.7e-56 223.4 327 42.2
GWHGAORA033153 Cenchrus purpureus HOM05M000417 ORTHO05M003013 6.6e-56 221.5 329 44.4
Bradi4g45200 Brachypodium distachyon HOM05M000417 ORTHO05M003013 1.1e-55 220.7 328 41.2
PH02Gene13658 Phyllostachys edulis HOM05M000417 ORTHO05M003013 1.5e-55 220.3 328 41.8
Seita.3G152200 Setaria italica HOM05M000417 ORTHO05M003013 1.5e-55 220.3 331 41.4
Sevir.3G155000 Setaria viridis HOM05M000417 ORTHO05M003013 1.5e-55 220.3 331 41.4
EJB05_51715 Eragrostis curvula HOM05M000417 ORTHO05M003013 1.9e-55 219.9 353 40.8
Pahal.5G430500 Panicum hallii HOM05M000417 ORTHO05M003013 1.9e-55 219.9 329 42.9
Sspon.05G0021670-2P Saccharum spontaneum HOM05M000417 ORTHO05M003013 1.9e-55 219.9 325 42.8
Sobic.005G001600 Sorghum bicolor HOM05M000417 ORTHO05M003013 7.2e-55 218.0 325 42.8
Sspon.05G0021670-2B Saccharum spontaneum HOM05M000417 ORTHO05M003013 1.6e-54 216.9 325 42.5
GWHGAORA038781 Cenchrus purpureus HOM05M000417 ORTHO05M003013 2.8e-54 216.1 331 40.5
GWHGAORA003838 Cenchrus purpureus HOM05M000417 ORTHO05M003013 6.1e-54 214.9 331 40.5
Pahal.5G255900 Panicum hallii HOM05M000417 ORTHO05M003013 4.0e-53 212.2 325 41.2
TraesCS5B03G0420600 Triticum aestivum HOM05M000417 ORTHO05M003013 4.0e-53 212.2 325 41.5
TRITD5Bv1G096840 Triticum turgidum HOM05M000417 ORTHO05M003013 4.0e-53 212.2 325 41.5
TRIDC5BG026960 Triticum dicoccoides HOM05M000417 ORTHO05M003013 5.2e-53 211.8 325 41.5
TraesCS5A03G0425100 Triticum aestivum HOM05M000417 ORTHO05M003013 2.6e-52 209.5 325 41.2
TRITD5Av1G115920 Triticum turgidum HOM05M000417 ORTHO05M003013 2.6e-52 209.5 325 41.2
GWHGASIY025588 Secale cereale HOM05M000417 ORTHO05M003013 3.4e-52 209.1 325 40.3
Zm00007a00014480 Zea mays B104 HOM05M000417 ORTHO05M003013 2.2e-51 206.5 325 40.0
Ot_Chr2_gn32680 Oropetium thomaeum HOM05M000417 ORTHO05M003013 3.7e-51 205.7 328 40.5
Sspon.07G0016590-2B Saccharum spontaneum HOM05M000417 ORTHO05M003013 3.7e-51 205.7 325 40.9
GWHGAZTO010067 Oryza alta HOM05M000417 ORTHO05M003013 6.4e-51 204.9 331 40.2
V3.Lp_chr5_0G9366 Lolium perenne HOM05M000417 ORTHO05M003013 2.4e-50 203.0 328 38.4
Sspon.05G0021670-3C Saccharum spontaneum HOM05M000417 ORTHO05M003013 3.2e-50 202.6 352 39.2
Zm00001eb194870 Zea mays B73 HOM05M000417 ORTHO05M003013 4.1e-50 202.2 325 39.7
TraesCS5A03G0425200 Triticum aestivum HOM05M000417 ORTHO05M003013 9.2e-50 201.1 328 39.3
TRITD5Av1G115930 Triticum turgidum HOM05M000417 ORTHO05M003013 9.2e-50 201.1 328 39.3
Sspon.05G0021670-1P Saccharum spontaneum HOM05M000417 ORTHO05M003013 1.5e-47 193.7 257 43.6
TraesCS5B03G0421300 Triticum aestivum HOM05M000417 ORTHO05M003013 1.9e-47 193.4 328 38.1
TRITD5Bv1G096760 Triticum turgidum HOM05M000417 ORTHO05M003013 1.9e-47 193.4 328 38.1
GWHGAORA041820 Cenchrus purpureus HOM05M000417 ORTHO05M003013 7.3e-47 191.4 314 43.0
Bradi2g18110 Brachypodium distachyon HOM05M000417 ORTHO05M003013 9.5e-47 191.0 327 37.9
AET5Gv20395800 Aegilops tauschii HOM05M000417 ORTHO05M003013 1.6e-46 190.3 328 37.8
TraesCS5D03G0393800 Triticum aestivum HOM05M000417 ORTHO05M003013 1.6e-46 190.3 328 37.8
GWHGASIY025589 Secale cereale HOM05M000417 ORTHO05M003013 2.8e-46 189.5 328 37.5
Misin19G050600 Miscanthus sinensis HOM05M000417 ORTHO05M003013 6.2e-46 188.3 339 37.8
Sspon.05G0021670-1A Saccharum spontaneum HOM05M000417 ORTHO05M003013 1.0e-45 187.6 312 39.4
V3.Lp_chr7_0.1G2006 Lolium perenne HOM05M000417 ORTHO05M003013 1.4e-45 187.2 333 37.2
Sspon.07G0016590-1A Saccharum spontaneum HOM05M000417 ORTHO05M003013 5.8e-44 181.8 318 39.6
GWHGAORA043163 Cenchrus purpureus HOM05M000417 ORTHO05M003013 1.9e-42 176.8 324 39.2
GWHGAORA017263 Cenchrus purpureus HOM05M000417 ORTHO05M003013 2.4e-42 176.4 320 36.2
GWHGASIY018762 Secale cereale HOM05M000417 ORTHO05M003013 2.4e-42 176.4 360 34.2
Sevir.5G058500 Setaria viridis HOM05M000417 ORTHO05M003013 1.2e-41 174.1 246 42.3
GWHGAZTO065282 Oryza alta HOM05M000417 ORTHO05M003013 3.5e-41 172.6 287 37.6
TRITD7Av1G055180 Triticum turgidum HOM05M000417 ORTHO05M003013 6.0e-41 171.8 323 35.6
TraesCS5D03G0393600 Triticum aestivum HOM05M000417 ORTHO05M003013 2.3e-40 169.9 279 40.9
AET7Gv20449700 Aegilops tauschii HOM05M000417 ORTHO05M003013 3.9e-40 169.1 313 37.7
AET5Gv20395400 Aegilops tauschii HOM05M000417 ORTHO05M003013 8.6e-40 167.9 279 40.5
TraesCS7D03G0392500 Triticum aestivum HOM05M000417 ORTHO05M003013 4.3e-39 165.6 313 37.7
Ot_Chr2_g22219 Oropetium thomaeum HOM05M000417 ORTHO05M003013 1.6e-38 163.7 288 38.9
TRIDC5AG025830 Triticum dicoccoides HOM05M000417 ORTHO05M003013 1.6e-38 163.7 243 38.7
Dexi5B01G0011480 Digitaria exilis HOM05M000417 ORTHO05M003013 3.6e-38 162.5 215 46.5
p5.00_sc00003_p0160 Elaeis guineensis HOM05M000417 ORTHO05M003013 8.1e-38 161.4 338 33.4
GWHGASIY021055 Secale cereale HOM05M000417 ORTHO05M003013 4.0e-37 159.1 313 36.4
CALSI_Maker00020794 Calamus simplicifolius HOM05M000417 ORTHO05M003013 6.8e-37 158.3 335 33.4
TRITD7Bv1G030900 Triticum turgidum HOM05M000417 ORTHO05M003013 2.6e-36 156.4 280 36.8
Aco012460 Ananas comosus HOM05M000417 ORTHO05M003013 2.2e-35 153.3 325 33.2
HPP92_015574 Vanilla planifolia HOM05M000417 ORTHO05M003013 1.9e-34 150.2 325 32.3
MBI14_g39106_MAGBIO Magnolia biondii HOM05M000417 ORTHO05M003013 3.2e-34 149.4 354 29.9
Ma10_g03370 Musa acuminata HOM05M000417 ORTHO05M003013 7.1e-34 148.3 325 32.3
DDU174G0040 Dioscorea dumetorum HOM05M000417 ORTHO05M003013 2.5e-31 139.8 342 31.0
GWHGAORA017246 Cenchrus purpureus HOM05M000417 ORTHO05M003013 5.6e-31 138.7 218 38.1
DDU550G0071 Dioscorea dumetorum HOM05M000417 ORTHO05M003013 9.5e-31 137.9 342 31.0
OsKitaake12g002200 Oryza sativa Kitaake HOM05M000417 ORTHO05M003013 1.2e-30 137.5 177 45.2
Os12g0102900 Oryza sativa ssp. japonica HOM05M000417 ORTHO05M003013 1.2e-30 137.5 177 45.2
Os11g0103400 Oryza sativa ssp. japonica HOM05M000417 ORTHO05M003013 3.6e-30 136.0 177 45.2
GWHGAZTO013275 Oryza alta HOM05M000417 ORTHO05M003013 1.4e-29 134.0 182 46.7
Asa7G02206 Allium sativum HOM05M000417 ORTHO05M003013 9.9e-28 127.9 283 31.8
Asa7G03219 Allium sativum HOM05M000417 ORTHO05M003013 2.2e-27 126.7 287 31.0
Zosma06g21390 Zostera marina HOM05M000417 ORTHO05M003013 1.1e-26 124.4 310 29.7
evm.TU.AsparagusV1_07.383.V1.1 Asparagus officinalis HOM05M000417 ORTHO05M003013 1.2e-25 120.9 247 29.6
Sobic.002G126100 Sorghum bicolor HOM05M000417 ORTHO05M003013 2.7e-25 119.8 155 43.9
Potri.009G150100 Populus trichocarpa HOM05M000417 ORTHO05M003013 4.6e-25 119.0 288 28.8
ATR1159G022 Amborella trichopoda HOM05M000417 ORTHO05M003013 3.9e-24 115.9 320 27.2
EJB05_50040 Eragrostis curvula HOM05M000417 ORTHO05M003013 3.9e-24 115.9 109 57.8
Potri.006G104700 Populus trichocarpa HOM05M000417 ORTHO05M003013 6.6e-24 115.2 328 26.5
EJB05_30080 Eragrostis curvula HOM05M000417 ORTHO05M003013 1.2e-22 110.9 178 37.1
Spipo29G0019300 Spirodela polyrhiza HOM05M000417 ORTHO05M003013 1.2e-22 110.9 331 27.8
Glyma.12G071900 Glycine max HOM05M000417 ORTHO05M003013 1.4e-21 107.5 294 27.6
EJB05_30082 Eragrostis curvula HOM05M000417 ORTHO05M003013 2.6e-20 103.2 277 31.8
Solyc06g005000.3 Solanum lycopersicum HOM05M000417 ORTHO05M003013 2.6e-20 103.2 281 26.7
Zjn_sc00097.1.g00800.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M000417 ORTHO05M003013 1.7e-19 100.5 201 38.3
AT5G60250 Arabidopsis thaliana HOM05M000417 ORTHO05M003013 8.4e-19 98.2 287 27.2
Glyma.11G152542 Glycine max HOM05M000417 ORTHO05M003013 1.4e-18 97.4 285 26.0
AT3G45580 Arabidopsis thaliana HOM05M000417 ORTHO05M003013 5.4e-18 95.5 288 28.1
AT2G26130 Arabidopsis thaliana HOM05M000417 ORTHO05M003013 2.7e-17 93.2 318 27.0
AT3G43750 Arabidopsis thaliana HOM05M000417 ORTHO05M003013 1.0e-16 91.3 273 28.6
SEGI_38593 Sequoiadendron giganteum HOM05M000417 ORTHO05M003013 1.0e-16 91.3 287 25.8
AT3G45540 Arabidopsis thaliana HOM05M000417 ORTHO05M003013 3.9e-16 89.4 274 28.1
AT2G26135 Arabidopsis thaliana HOM05M000417 ORTHO05M003013 4.3e-15 85.9 292 26.7
AT2G25370 Arabidopsis thaliana HOM05M000417 ORTHO05M003013 5.6e-15 85.5 235 26.4
Sevir.8G001400 Setaria viridis HOM05M000417 ORTHO05M033987 1.1e-13 81.3 219 29.2
Seita.8G001900 Setaria italica HOM05M000417 ORTHO05M033987 3.1e-13 79.7 220 29.5
OsR498G1220790100.01 Oryza sativa ssp. indica HOM05M000417 ORTHO05M003013 5.3e-13 79.0 151 33.8
AT3G45480 Arabidopsis thaliana HOM05M000417 ORTHO05M003013 9.0e-13 78.2 271 26.6
SMO361G0501 Selaginella moellendorffii HOM05M000417 ORTHO05M000629 2.6e-12 76.6 192 29.2
AT3G45470 Arabidopsis thaliana HOM05M000417 ORTHO05M003013 1.1e-10 71.2 181 27.1
AT3G45555 Arabidopsis thaliana HOM05M000417 ORTHO05M003013 3.2e-10 69.7 182 28.6
EJB05_51718 Eragrostis curvula HOM05M000417 ORTHO05M110357 3.2e-10 69.7 72 51.4
EJB05_53207 Eragrostis curvula HOM05M000417 ORTHO05M003013 3.2e-10 69.7 72 51.4
AT3G45570 Arabidopsis thaliana HOM05M000417 ORTHO05M003013 5.4e-10 68.9 241 25.3
AT2G19610 Arabidopsis thaliana HOM05M000417 ORTHO05M003013 1.2e-09 67.8 271 22.1
GWHGAORA010852 Cenchrus purpureus HOM05M000417 ORTHO05M003013 2.1e-09 67.0 134 32.8
AT2G21420 Arabidopsis thaliana HOM05M000417 ORTHO05M003013 2.7e-09 66.6 243 22.6
MisinT054500 Miscanthus sinensis HOM05M000417 ORTHO05M003013 4.6e-09 65.9 93 40.9
EJB05_35306 Eragrostis curvula HOM05M000417 ORTHO05M003013 6.0e-09 65.5 68 39.7
SMO147G0125 Selaginella moellendorffii HOM05M000417 ORTHO05M003013 3.9e-08 62.8 178 26.4
SMO147G0272 Selaginella moellendorffii HOM05M000417 ORTHO05M000629 3.9e-08 62.8 178 26.4
SMO330G0011 Selaginella moellendorffii HOM05M000417 ORTHO05M003013 3.9e-08 62.8 178 26.4
AT5G07640 Arabidopsis thaliana HOM05M000417 ORTHO05M003013 1.1e-07 61.2 147 27.9
Mapoly0010s0070 Marchantia polymorpha HOM05M000417 ORTHO05M000629 1.5e-07 60.8 271 21.8
EJB05_51714 Eragrostis curvula HOM05M005735 ORTHO05M014899 5.6e-07 58.9 93 38.7
Zm00007a00042282 Zea mays B104 HOM05M000417 ORTHO05M003013 3.6e-06 56.2 89 32.6
Glyma.09G020000 Glycine max HOM05M000417 ORTHO05M009158 4.8e-06 55.8 288 22.2


User provided reference genes

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