Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Misin08G097000 Miscanthus sinensis HOM05M008943 ORTHO05M004551 1.8e-40 167.9 77 100.0
Misin08G096800 Miscanthus sinensis HOM05M008943 ORTHO05M004551 8.2e-38 159.1 77 94.8
Sobic.004G075351 Sorghum bicolor HOM05M008943 ORTHO05M004551 1.9e-31 137.9 77 84.4
Misin08G097300 Miscanthus sinensis HOM05M008943 ORTHO05M004551 7.7e-20 99.4 80 62.5
Misin08G097100 Miscanthus sinensis HOM05M008943 ORTHO05M004551 2.2e-19 97.8 86 54.7
Misin08G096900 Miscanthus sinensis HOM05M008943 ORTHO05M004551 6.1e-17 89.7 87 54.0
Misin07G072500 Miscanthus sinensis HOM05M008943 ORTHO05M004551 2.3e-16 87.8 86 52.3
Sobic.004G075400 Sorghum bicolor HOM05M008943 ORTHO05M004551 8.8e-16 85.9 87 54.0
Misin07G072600 Miscanthus sinensis HOM05M008943 ORTHO05M004551 5.7e-15 83.2 83 56.6
Sspon.04G0016170-1A Saccharum spontaneum HOM05M008943 ORTHO05M004551 7.4e-15 82.8 84 52.4
Sobic.004G072950 Sorghum bicolor HOM05M008943 ORTHO05M004551 2.2e-14 81.3 75 58.7
TraesCS7D03G1116200 Triticum aestivum HOM05M008943 ORTHO05M004551 6.3e-14 79.7 83 54.2
TraesCS7A03G1178200 Triticum aestivum HOM05M008943 ORTHO05M004551 1.1e-13 79.0 84 54.8
Sspon.04G0028110-2D Saccharum spontaneum HOM05M008943 ORTHO05M004551 1.8e-13 78.2 79 55.7
TraesCS7D03G1114000 Triticum aestivum HOM05M008943 ORTHO05M004551 2.4e-13 77.8 82 51.2
TraesCS7D03G1120200 Triticum aestivum HOM05M008943 ORTHO05M004551 2.4e-13 77.8 84 54.8
EJB05_26029 Eragrostis curvula HOM05M008943 ORTHO05M004551 4.1e-13 77.0 87 48.3
EJB05_57151 Eragrostis curvula HOM05M008943 ORTHO05M004551 4.1e-13 77.0 87 48.3
Sobic.004G075301 Sorghum bicolor HOM05M008943 ORTHO05M004551 7.0e-13 76.3 84 51.2
TraesCS7B03G1040000 Triticum aestivum HOM05M008943 ORTHO05M004551 7.0e-13 76.3 83 51.8
TraesCS7D03G1115900 Triticum aestivum HOM05M008943 ORTHO05M004551 7.0e-13 76.3 83 49.4
TraesCS7B03G1048900 Triticum aestivum HOM05M008943 ORTHO05M004551 9.1e-13 75.9 84 53.6
TraesCS7A03G1174800 Triticum aestivum HOM05M008943 ORTHO05M004551 1.2e-12 75.5 86 50.0
TraesCS7A03G1175200 Triticum aestivum HOM05M008943 ORTHO05M004551 1.6e-12 75.1 83 48.2
Sobic.004G075550 Sorghum bicolor HOM05M008943 ORTHO05M004551 4.5e-12 73.6 87 47.1
TraesCS7B03G1199400 Triticum aestivum HOM05M008943 ORTHO05M004551 5.9e-12 73.2 84 47.6
TraesCS7B03G1252900 Triticum aestivum HOM05M008943 ORTHO05M004551 5.9e-12 73.2 84 48.8
Ot_Chr7_g13257 Oropetium thomaeum HOM05M007350 ORTHO05M009628 7.7e-12 72.8 79 46.8
Sspon.04G0028110-1B Saccharum spontaneum HOM05M008943 ORTHO05M004551 2.2e-11 71.2 74 54.1
TraesCS7A03G1168500 Triticum aestivum HOM05M008943 ORTHO05M004551 6.5e-11 69.7 81 46.9
Ot_Chr7_g13256 Oropetium thomaeum HOM05M007350 ORTHO05M009628 4.2e-10 67.0 79 49.4
Pahal.6G286600 Panicum hallii HOM05M007350 ORTHO05M009628 4.2e-10 67.0 81 43.2
Seita.3G341800 Setaria italica HOM05M007350 ORTHO05M009628 2.1e-09 64.7 79 41.8
Dexi1B01G0009500 Digitaria exilis HOM05M007350 ORTHO05M009628 2.7e-09 64.3 80 48.8
Dexi8A01G0014220 Digitaria exilis HOM05M005956 ORTHO05M009628 3.6e-09 63.9 74 37.8
Ot_Chr7_gn38195 Oropetium thomaeum HOM05M007350 ORTHO05M009628 3.6e-09 63.9 80 46.2
Dexi1A01G0009980 Digitaria exilis HOM05M007350 ORTHO05M009628 4.7e-09 63.5 80 47.5
DexiUA01G0010620 Digitaria exilis HOM05M007350 ORTHO05M009628 4.7e-09 63.5 80 47.5
Seita.3G341600 Setaria italica HOM05M007350 ORTHO05M009628 4.7e-09 63.5 78 38.5
Pahal.6G286700 Panicum hallii HOM05M007350 ORTHO05M009628 6.1e-09 63.2 81 40.7
Sevir.3G356700 Setaria viridis HOM05M007350 ORTHO05M009628 8.0e-09 62.8 79 41.8
Misin10G203500 Miscanthus sinensis HOM05M007350 ORTHO05M009628 1.0e-08 62.4 78 41.0
Seita.3G341500 Setaria italica HOM05M007350 ORTHO05M009628 1.0e-08 62.4 79 41.8
Sevir.3G356400 Setaria viridis HOM05M007350 ORTHO05M009628 1.0e-08 62.4 79 41.8
Seita.3G341700 Setaria italica HOM05M007350 ORTHO05M009628 1.4e-08 62.0 79 39.2
Sevir.3G356600 Setaria viridis HOM05M007350 ORTHO05M009628 1.4e-08 62.0 79 39.2
TraesCS2D03G0344000 Triticum aestivum HOM05M008943 ORTHO05M004551 1.4e-08 62.0 86 48.8
Ot_Chr7_gn38196 Oropetium thomaeum HOM05M007350 ORTHO05M009628 1.8e-08 61.6 83 37.3
GWHGAORA037149 Cenchrus purpureus HOM05M007350 ORTHO05M009628 2.3e-08 61.2 80 42.5
Sevir.3G356500 Setaria viridis HOM05M007350 ORTHO05M009628 2.3e-08 61.2 75 38.7
GWHGAORA037171 Cenchrus purpureus HOM05M007350 ORTHO05M009628 4.0e-08 60.5 80 42.5
Dexi6A01G0008870 Digitaria exilis HOM05M007350 ORTHO05M009628 4.0e-08 60.5 77 35.1
Sobic.005G196400 Sorghum bicolor HOM05M007350 ORTHO05M009628 6.7e-08 59.7 77 41.6
Dexi6B01G0007580 Digitaria exilis HOM05M007350 ORTHO05M009628 1.1e-07 58.9 77 33.8
Sspon.02G0021750-2B Saccharum spontaneum HOM05M007350 ORTHO05M009628 3.3e-07 57.4 79 41.8
Sspon.02G0021750-1A Saccharum spontaneum HOM05M007350 ORTHO05M009628 7.5e-07 56.2 79 40.5
MisinT411400 Miscanthus sinensis HOM05M007350 ORTHO05M009628 9.7e-07 55.8 79 41.8
Misin13G110100 Miscanthus sinensis HOM05M007350 ORTHO05M009628 1.7e-06 55.1 80 40.0
Seita.9G340700 Setaria italica HOM05M007350 ORTHO05M009628 8.2e-06 52.8 78 37.2
Sevir.9G344900 Setaria viridis HOM05M007350 ORTHO05M009628 8.2e-06 52.8 78 37.2


User provided reference genes

Program Settings