Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Misin08G051500 Miscanthus sinensis HOM05M004748 ORTHO05M005920 4.9e-197 690.3 372 100.0
Misin17G183400 Miscanthus sinensis HOM05M004748 ORTHO05M005920 3.3e-185 651.0 374 93.6
Misin07G051600 Miscanthus sinensis HOM05M004748 ORTHO05M005920 2.4e-183 644.8 372 92.7
Sobic.004G052900 Sorghum bicolor HOM05M004748 ORTHO05M005920 4.6e-179 630.6 373 87.9
Zm00001eb232860 Zea mays B73 HOM05M004748 ORTHO05M005920 6.2e-176 620.2 340 90.0
Misin08G052300 Miscanthus sinensis HOM05M004748 ORTHO05M005920 7.1e-172 606.7 372 83.3
Seita.1G076200 Setaria italica HOM05M004748 ORTHO05M005920 3.9e-170 600.9 379 81.3
Sevir.1G074500 Setaria viridis HOM05M004748 ORTHO05M005920 1.9e-169 598.6 379 81.0
GWHGAORA041695 Cenchrus purpureus HOM05M004748 ORTHO05M005920 2.0e-166 588.6 378 79.9
Misin17G179100 Miscanthus sinensis HOM05M004748 ORTHO05M005920 5.9e-166 587.0 340 87.1
GWHGAORA033289 Cenchrus purpureus HOM05M004748 ORTHO05M005920 2.2e-165 585.1 380 80.5
Seita.9G070300 Setaria italica HOM05M004748 ORTHO05M005920 1.4e-164 582.4 328 87.8
Sevir.9G069600 Setaria viridis HOM05M004748 ORTHO05M005920 2.5e-164 581.6 328 87.8
Pahal.1G048200 Panicum hallii HOM05M004748 ORTHO05M005920 1.3e-160 569.3 317 88.3
GWHGAORA015462 Cenchrus purpureus HOM05M004748 ORTHO05M005920 1.8e-159 565.5 315 87.6
Zm00007a00033601 Zea mays B104 HOM05M004748 ORTHO05M005920 5.3e-159 563.9 340 84.4
Sspon.04G0017590-2C Saccharum spontaneum HOM05M004748 ORTHO05M005920 1.0e-157 559.7 316 88.6
Dexi1B01G0004900 Digitaria exilis HOM05M004748 ORTHO05M005920 1.5e-153 545.8 351 78.3
Dexi1A01G0005180 Digitaria exilis HOM05M004748 ORTHO05M005920 1.2e-147 526.2 328 80.2
Misin15G049100 Miscanthus sinensis HOM05M004748 ORTHO05M005920 1.5e-145 519.2 392 71.4
TraesCS6D03G0285300 Triticum aestivum HOM05M004748 ORTHO05M005920 7.5e-145 516.9 324 79.0
EJB05_24474 Eragrostis curvula HOM05M002044 ORTHO05M003016 1.7e-144 515.8 332 76.8
TraesCS6B03G0430500 Triticum aestivum HOM05M004748 ORTHO05M005920 2.2e-144 515.4 320 79.4
EJB05_24449 Eragrostis curvula HOM05M002044 ORTHO05M003016 4.8e-144 514.2 332 76.2
TraesCS6A03G0333000 Triticum aestivum HOM05M004748 ORTHO05M005920 4.8e-144 514.2 319 79.3
TRIDC6AG019120 Triticum dicoccoides HOM05M004748 ORTHO05M005920 4.8e-144 514.2 319 79.3
Horvu_MOREX_6H01G183800 Hordeum vulgare HOM05M004748 ORTHO05M005920 6.3e-144 513.8 324 79.0
GWHGASIY031325 Secale cereale HOM05M004748 ORTHO05M005920 1.4e-143 512.7 319 79.0
Ot_Chr1_g14423 Oropetium thomaeum HOM05M004748 ORTHO05M005920 2.4e-143 511.9 349 73.4
Sspon.04G0017590-1A Saccharum spontaneum HOM05M004748 ORTHO05M005920 9.1e-143 510.0 372 76.1
GWHGAZTO016705 Oryza alta HOM05M004748 ORTHO05M005920 1.7e-141 505.8 318 77.4
Os02g0167000 Oryza sativa ssp. japonica HOM05M004748 ORTHO05M005920 1.5e-140 502.7 324 76.2
TRITD6Bv1G061060 Triticum turgidum HOM05M004748 ORTHO05M005920 1.4e-138 496.1 290 82.1
PH02Gene38127 Phyllostachys edulis HOM05M004748 ORTHO05M005920 1.8e-135 485.7 307 77.9
Bradi3g04970 Brachypodium distachyon HOM05M004748 ORTHO05M005920 2.4e-135 485.3 322 76.7
Bradi2g08160 Brachypodium distachyon HOM05M004748 ORTHO05M005920 3.1e-135 485.0 332 73.2
OsKitaake02g053100 Oryza sativa Kitaake HOM05M004748 ORTHO05M005920 2.5e-132 475.3 308 75.6
OsR498G0203040300.01 Oryza sativa ssp. indica HOM05M004748 ORTHO05M005920 2.5e-132 475.3 308 75.6
TRITD6Av1G048630 Triticum turgidum HOM05M004748 ORTHO05M005920 1.7e-125 452.6 253 84.2
GWHGAORA058435 Cenchrus purpureus HOM05M004748 ORTHO05M005920 1.1e-124 449.9 379 67.0
GWHGAORA058453 Cenchrus purpureus HOM05M004748 ORTHO05M005920 2.3e-122 442.2 373 66.0
TRIDC6BG025140 Triticum dicoccoides HOM05M004748 ORTHO05M005920 5.7e-121 437.6 241 86.3
EJB05_45686 Eragrostis curvula HOM05M004748 ORTHO05M005920 3.5e-118 428.3 361 61.8
Ma08_g33650 Musa acuminata HOM05M004748 ORTHO05M005920 1.5e-116 422.9 326 63.2
OB02G14340 Oryza brachyantha HOM05M002044 ORTHO05M003016 6.2e-115 417.5 280 72.9
evm.TU.AsparagusV1_02.2095.V1.1 Asparagus officinalis HOM05M004748 ORTHO05M005920 3.7e-112 408.3 345 58.8
GWHGAORA015501 Cenchrus purpureus HOM05M004748 ORTHO05M005920 1.2e-110 403.3 392 63.0
Aco008399 Ananas comosus HOM05M002044 ORTHO05M003016 4.3e-108 394.8 343 59.8
p5.00_sc00022_p0011 Elaeis guineensis HOM05M004748 ORTHO05M005920 2.1e-107 392.5 326 58.6
Potri.005G173000 Populus trichocarpa HOM05M004748 ORTHO05M005920 1.7e-104 382.9 322 57.5
Potri.002G087700 Populus trichocarpa HOM05M004748 ORTHO05M005920 3.7e-104 381.7 338 55.9
HPP92_002257 Vanilla planifolia HOM05M004748 ORTHO05M005920 3.0e-101 372.1 340 53.5
Misin14G038500 Miscanthus sinensis HOM05M004748 ORTHO05M005920 8.6e-101 370.5 217 84.8
Solyc11g013200.2 Solanum lycopersicum HOM05M004748 ORTHO05M005920 2.5e-100 369.0 346 54.0
AET6Gv20358900 Aegilops tauschii HOM05M004748 ORTHO05M005920 7.3e-100 367.5 207 85.5
Asa2G03833 Allium sativum HOM05M004748 ORTHO05M005920 9.5e-100 367.1 297 59.6
Asa7G04885 Allium sativum HOM05M004748 ORTHO05M005920 1.2e-99 366.7 274 62.8
Glyma.04G252900 Glycine max HOM05M004748 ORTHO05M005920 1.1e-98 363.6 339 54.3
Glyma.06G109600 Glycine max HOM05M004748 ORTHO05M005920 2.3e-98 362.5 339 54.3
MBI06_g01065_MAGBIO Magnolia biondii HOM05M004748 ORTHO05M005920 2.6e-97 359.0 314 56.7
DDU272G0270 Dioscorea dumetorum HOM05M004748 ORTHO05M005920 4.4e-97 358.2 272 60.7
CDE08G0072 Ceratophyllum demersum HOM05M004748 ORTHO05M005920 5.8e-97 357.8 273 59.3
DDU305G0012 Dioscorea dumetorum HOM05M004748 ORTHO05M005920 7.6e-97 357.5 272 60.7
ATR0684G041 Amborella trichopoda HOM05M004748 ORTHO05M005920 4.9e-96 354.8 315 54.9
CALSI_Maker00016410 Calamus simplicifolius HOM05M004748 ORTHO05M000060 8.4e-96 354.0 355 51.3
Asa4G02453 Allium sativum HOM05M004748 ORTHO05M005920 2.4e-95 352.4 274 60.2
Zosma01g00620 Zostera marina HOM05M004748 ORTHO05M005920 2.5e-92 342.4 322 53.7
GWHGAZTO068445 Oryza alta HOM05M004748 ORTHO05M005920 1.3e-88 330.1 191 82.7
CALSI_Maker00013875 Calamus simplicifolius HOM05M004748 ORTHO05M005920 3.8e-88 328.6 345 50.4
Pp3c9_4090 Physcomitrium patens HOM05M004748 ORTHO05M005920 1.1e-87 327.0 275 55.6
AagrBONN_evm.TU.Sc2ySwM_117.2782 Anthoceros agrestis HOM05M004748 ORTHO05M005920 1.1e-82 310.5 297 50.5
Mapoly0100s0036 Marchantia polymorpha HOM05M004748 ORTHO05M005920 5.3e-82 308.1 277 52.7
AT1G37150 Arabidopsis thaliana HOM05M004748 ORTHO05M005920 9.0e-82 307.4 292 50.3
AT2G25710 Arabidopsis thaliana HOM05M004748 ORTHO05M005920 1.2e-78 297.0 264 53.0
Spipo15G0025600 Spirodela polyrhiza HOM05M004748 ORTHO05M005920 2.0e-65 253.1 327 42.8
SMO356G0070 Selaginella moellendorffii HOM05M004748 ORTHO05M005920 1.1e-63 247.3 247 49.4
CBR_g4408 Chara braunii HOM05M004748 ORTHO05M005920 3.2e-63 245.7 288 41.3
PRCOL_00005327 Prasinoderma coloniale HOM05M004748 ORTHO05M005920 5.0e-56 221.9 345 39.1
PH02Gene47982 Phyllostachys edulis HOM05M004748 ORTHO05M005920 4.3e-52 208.8 132 79.5
Cre09.g406000 Chlamydomonas reinhardtii HOM05M004748 ORTHO05M005920 1.3e-51 207.2 293 37.5
MCO05G148 Micromonas commoda HOM05M004748 ORTHO05M005920 1.3e-51 207.2 256 41.8
PH02Gene48114 Phyllostachys edulis HOM05M004748 ORTHO05M005920 8.2e-51 204.5 152 69.1
SEGI_13253 Sequoiadendron giganteum HOM05M004748 ORTHO05M005920 1.2e-46 190.7 160 53.8
Misin17G252400 Miscanthus sinensis HOM05M004748 ORTHO05M005920 7.9e-38 161.4 155 67.1
SEGI_02892 Sequoiadendron giganteum HOM05M004748 ORTHO05M005920 8.2e-27 124.8 104 51.0
Zjn_sc00037.1.g03825.1.br Zoysia japonica ssp. nagirizaki HOM05M004748 ORTHO05M005920 1.7e-16 90.5 109 50.5
Sspon.04G0033140-1C Saccharum spontaneum HOM05M004748 ORTHO05M005920 3.2e-15 86.3 130 45.4
Sspon.04G0033140-2D Saccharum spontaneum HOM05M004748 ORTHO05M033509 1.4e-13 80.9 41 92.7
DDU550G0065 Dioscorea dumetorum HOM05M004748 ORTHO05M005920 1.9e-07 60.5 41 61.0
TRITD2Bv1G107200 Triticum turgidum HOM05M000884 ORTHO05M005920 1.6e-06 57.4 34 67.6


User provided reference genes

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